RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 A0A0J9YY99 117 aa9.09□□□□□ -0.95
R3HDM1-213ENST00000463230 SCO2A0A1W2PP80 73 aa9.09□□□□□ -0.95
R3HDM1-213ENST00000463230 CRYBA4P53673 196 aa9.09□□□□□ -0.95
R3HDM1-213ENST00000463230 OR4C5Q8NGB2 326 aa9.09□□□□□ -0.95
R3HDM1-213ENST00000463230 HHLA3Q9XRX5 114 aa9.09□□□□□ -0.95
R3HDM1-213ENST00000463230 NACAE9PAV3 2078 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 IGKV3D-20A0A0C4DH25 116 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 B4DEV8 164 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 PDE6DO43924 150 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 SH2D1AO60880 128 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 ORM1P02763 201 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 BLOC1S1P78537 153 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 CCL20P78556 96 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 UPK3BQ9BT76 320 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 KRBOX1C9JBD0 128 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 CXCL1P09341 107 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 RNASE3P12724 160 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 S100A4P26447 101 aaKnown RBP9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 CRIP1P50238 77 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 SMIM12Q96EX1 92 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 IL36BQ9NZH7 164 aa9.08□□□□□ -0.96
R3HDM1-213ENST00000463230 A0A096LPF7 62 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 RS1O15537 224 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 IGHV3-53P01767 116 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 MEF2BQ02080 365 aaPredicted RBP9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 MRPL23Q16540 153 aaKnown RBP9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 ZNF876PQ49A33 203 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 BAGE2Q86Y30 109 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 MLST8Q9BVC4 326 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 MRPS16Q9Y3D3 137 aaKnown RBP9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 MED14OSP0DP75 135 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 BCL2P10415 239 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 Q6ZR54 194 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 LINC00336Q6ZUF6 198 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 SH2D6Q7Z4S9 175 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 ZNRF2Q8NHG8 242 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 ZNF479Q96JC4 524 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 VAX2Q9UIW0 290 aa9.07□□□□□ -0.96
R3HDM1-213ENST00000463230 A8MWV9 139 aa9.05□□□□□ -0.96
R3HDM1-213ENST00000463230 C9JCJ5 164 aa9.05□□□□□ -0.96
R3HDM1-213ENST00000463230 RPL35P42766 123 aaKnown RBP9.05□□□□□ -0.96
R3HDM1-213ENST00000463230 ZNF506Q5JVG8 444 aa9.05□□□□□ -0.96
R3HDM1-213ENST00000463230 SYT8Q8NBV8 401 aa9.05□□□□□ -0.96
R3HDM1-213ENST00000463230 GATA1P15976 413 aaPredicted RBP9.05□□□□□ -0.96
R3HDM1-213ENST00000463230 ZFP2Q6ZN57 461 aa9.05□□□□□ -0.96
R3HDM1-213ENST00000463230 PGPEP1LA6NFU8 196 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 SFTA3P0C7M3 94 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 BTF3P20290 206 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 ESRGQ1W209 222 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 CFAP126Q5VTH2 177 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 LYPD6BQ8NI32 183 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 SCRT2Q9NQ03 307 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 BIN3Q9NQY0 253 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 TTC32Q5I0X7 151 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 SOHLH1Q5JUK2 328 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 ALKAL2Q6UX46 152 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 NEGR1Q7Z3B1 354 aa9.04□□□□□ -0.96
R3HDM1-213ENST00000463230 TRBV6-4A0A1B0GX49 114 aa9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 A0A1W2PPQ1 181 aa9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 M0R036 132 aa9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 RHODO00212 210 aa9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 SRIP30626 198 aa9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 TIRAPP58753 221 aa9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 PRADC1Q9BSG0 188 aa9.03□□□□□ -0.96
R3HDM1-213ENST00000463230 KMT2AQ03164 3969 aa9.02□□□□□ -0.96
R3HDM1-213ENST00000463230 H3BVH4 76 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 K7EQD1 137 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 ARMS2P0C7Q2 107 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 MGST1P10620 155 aaKnown RBP9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 GYPEP15421 78 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 RHOHQ15669 191 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 CENPWQ5EE01 88 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 COMMD7Q86VX2 200 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 ZFP82Q8N141 532 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 NHLRC2Q8NBF2 726 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 PARLQ9H300 379 aa9.02□□□□□ -0.97
R3HDM1-213ENST00000463230 IGLV2-18A0A075B6J9 118 aa9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 GNG4P50150 75 aa9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 Q9H8V8 135 aa9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 MED9Q9NWA0 146 aa9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 PHLDA3Q9Y5J5 127 aa9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 LINC00862A6NCI5 91 aa9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 RPS20P60866 119 aaKnown RBP9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 TOR2AQ5JU69 321 aa9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 DERL1Q9BUN8 251 aa9.01□□□□□ -0.97
R3HDM1-213ENST00000463230 TMEM250H0YL14 139 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 M0R2N4 97 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 NXPH4O95158 308 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 CLLU1Q5K131 121 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 LYPD5Q6UWN5 251 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 ZNF575Q86XF7 245 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 CDIP1Q9H305 208 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 GRIFINA4D1Z8 144 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 SFRP2Q96HF1 295 aa9□□□□□ -0.97
R3HDM1-213ENST00000463230 RBFOX3A6NFN3 312 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms