RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 CEBPGP53567 150 aa11.61□□□□□ -0.55
HLA-DPA1-245ENST00000463066 FAM210AQ96ND0 272 aa11.61□□□□□ -0.55
HLA-DPA1-245ENST00000463066 EIF5A2Q9GZV4 153 aaKnown RBP11.61□□□□□ -0.55
HLA-DPA1-245ENST00000463066 TRAV4A0A0B4J268 109 aa11.6□□□□□ -0.55
HLA-DPA1-245ENST00000463066 DNLZQ5SXM8 178 aa11.6□□□□□ -0.55
HLA-DPA1-245ENST00000463066 C15orf53Q8NAA6 179 aa11.6□□□□□ -0.55
HLA-DPA1-245ENST00000463066 OR4C5Q8NGB2 326 aa11.6□□□□□ -0.55
HLA-DPA1-245ENST00000463066 PARLQ9H300 379 aa11.6□□□□□ -0.55
HLA-DPA1-245ENST00000463066 JPT2Q9H910 190 aa11.6□□□□□ -0.55
HLA-DPA1-245ENST00000463066 IGHV3-73A0A0B4J1V6 119 aa11.59□□□□□ -0.55
HLA-DPA1-245ENST00000463066 TRGV4A0A0C4DH28 118 aa11.59□□□□□ -0.55
HLA-DPA1-245ENST00000463066 RS1O15537 224 aa11.59□□□□□ -0.55
HLA-DPA1-245ENST00000463066 SRP19P09132 144 aaKnown RBP11.59□□□□□ -0.55
HLA-DPA1-245ENST00000463066 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
HLA-DPA1-245ENST00000463066 CFAP126Q5VTH2 177 aa11.59□□□□□ -0.55
HLA-DPA1-245ENST00000463066 IL36BQ9NZH7 164 aa11.59□□□□□ -0.55
HLA-DPA1-245ENST00000463066 MUC21A0A0G2JKD1 596 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 MUC21A0A140T8X8 626 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 C19orf71A6NCJ1 209 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 C9JQL5 133 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 TMEM250H0YL14 139 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 K7EN84 100 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 PAX4O43316 350 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 P0DMU3 169 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 FAM231AP0DMU4 169 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 FAM231CP0DMU5 169 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 GZMBP10144 247 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 CRYBA4P53673 196 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 DMRTA1Q5VZB9 504 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 OCC1Q8TAD7 63 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 PTH2Q96A98 100 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 SCRT2Q9NQ03 307 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 HHLA3Q9XRX5 114 aa11.58□□□□□ -0.56
HLA-DPA1-245ENST00000463066 UBE2DNLQ8IWF7 75 aa11.57□□□□□ -0.56
HLA-DPA1-245ENST00000463066 SAMD10Q9BYL1 202 aa11.57□□□□□ -0.56
HLA-DPA1-245ENST00000463066 PRO0255Q9UI72 69 aa11.57□□□□□ -0.56
HLA-DPA1-245ENST00000463066 A0A096LPF7 62 aa11.56□□□□□ -0.56
HLA-DPA1-245ENST00000463066 LOC100131303A0A0U1RQF7 123 aa11.56□□□□□ -0.56
HLA-DPA1-245ENST00000463066 M0R381 172 aa11.56□□□□□ -0.56
HLA-DPA1-245ENST00000463066 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
HLA-DPA1-245ENST00000463066 OR10AG1Q8NH19 301 aa11.56□□□□□ -0.56
HLA-DPA1-245ENST00000463066 DNAH6Q9C0G6 4158 aa11.55□□□□□ -0.56
HLA-DPA1-245ENST00000463066 H3BNG1 76 aa11.55□□□□□ -0.56
HLA-DPA1-245ENST00000463066 Q6ZSN1 163 aa11.55□□□□□ -0.56
HLA-DPA1-245ENST00000463066 SMIM12Q96EX1 92 aa11.55□□□□□ -0.56
HLA-DPA1-245ENST00000463066 LINC00588Q9Y4M8 146 aa11.55□□□□□ -0.56
HLA-DPA1-245ENST00000463066 PHLDA3Q9Y5J5 127 aa11.55□□□□□ -0.56
HLA-DPA1-245ENST00000463066 CXCL1P09341 107 aa11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 GATA1P15976 413 aaPredicted RBP11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 SSTP61278 116 aa11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 IFITM2Q01629 132 aa11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 ESRGQ1W209 222 aa11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 NUDT10Q8NFP7 164 aa11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 DAZAP1Q96EP5 407 aaKnown RBP11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 NUDT11Q96G61 164 aa11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 RNASE7Q9H1E1 156 aaKnown RBP11.54□□□□□ -0.56
HLA-DPA1-245ENST00000463066 IGLV2-18A0A075B6J9 118 aa11.53□□□□□ -0.56
HLA-DPA1-245ENST00000463066 P01737 135 aa11.53□□□□□ -0.56
HLA-DPA1-245ENST00000463066 GYPEP15421 78 aa11.53□□□□□ -0.56
HLA-DPA1-245ENST00000463066 SMIM7Q9BQ49 75 aa11.53□□□□□ -0.56
HLA-DPA1-245ENST00000463066 NACAE9PAV3 2078 aa11.53□□□□□ -0.56
HLA-DPA1-245ENST00000463066 A0A087WWL8 130 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 SNAI2O43623 268 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 MED14OSP0DP75 135 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 SLAQ13239 276 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 RNF212Q495C1 297 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 UFSP1Q6NVU6 142 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 SLC25A29Q8N8R3 303 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 SYT8Q8NBV8 401 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 SSBP4Q9BWG4 385 aaPredicted RBP11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
HLA-DPA1-245ENST00000463066 ZNF727A8MUV8 499 aa11.51□□□□□ -0.57
HLA-DPA1-245ENST00000463066 A8MWV9 139 aa11.51□□□□□ -0.57
HLA-DPA1-245ENST00000463066 M0R2N4 97 aa11.51□□□□□ -0.57
HLA-DPA1-245ENST00000463066 IGLC6P0CF74 106 aa11.51□□□□□ -0.57
HLA-DPA1-245ENST00000463066 ZFP82Q8N141 532 aa11.51□□□□□ -0.57
HLA-DPA1-245ENST00000463066 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
HLA-DPA1-245ENST00000463066 TPPP3Q9BW30 176 aa11.51□□□□□ -0.57
HLA-DPA1-245ENST00000463066 Q9UF83 564 aa11.51□□□□□ -0.57
HLA-DPA1-245ENST00000463066 K7EQD1 137 aa11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 NDUFS6O75380 124 aaKnown RBP11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 NXPH4O95158 308 aa11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 CRYGDP07320 174 aa11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 CCL18P55774 89 aa11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 PIK3CD-AS1Q5SR53 167 aa11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 FAM74A4Q5TZK3 123 aa11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 BIN3Q9NQY0 253 aa11.5□□□□□ -0.57
HLA-DPA1-245ENST00000463066 OR5AL1P0C617 328 aa11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 RPS20P60866 119 aaKnown RBP11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 PEA15Q15121 130 aa11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 MRPL23Q16540 153 aaKnown RBP11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 LINC01551Q86U37 167 aa11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 C14orf178Q8N769 122 aaPredicted RBP11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 FER1L6-AS1Q8NA97 138 aa11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 RPP21Q9H633 154 aaKnown RBP11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 MSRB1Q9NZV6 116 aa11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 KMT2AQ03164 3969 aa11.49□□□□□ -0.57
HLA-DPA1-245ENST00000463066 SPANXN1Q5VSR9 72 aa11.48□□□□□ -0.57
HLA-DPA1-245ENST00000463066 DNAH10Q8IVF4 4471 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms