RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 NINQ8N4C6 2090 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 PTPRFP10586 1907 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 MYH7P12883 1935 aa1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 KTN1Q86UP2 1357 aaKnown RBP1.58□□□□□ -2.16
SPTLC1-203ENST00000461132 ZNF518AQ6AHZ1 1483 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 TRBV10-1A0A0K0K1A3 114 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 KLF7O75840 302 aaPredicted RBP1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 TNFP01375 233 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 IGKCP01834 107 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 MRPL54Q6P161 138 aaKnown RBP1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 DEFB119Q8N690 84 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 TMEM141Q96I45 108 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 PPP3R2Q96LZ3 170 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 NDUFA12Q9UI09 145 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 MYH9P35579 1960 aaKnown RBP1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 ARFGEF3Q5TH69 2177 aa1.57□□□□□ -2.16
SPTLC1-203ENST00000461132 COL5A1P20908 1838 aaPredicted RBP1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 CFTRP13569 1480 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 CACNA1GO43497 2377 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 CHD3Q12873 2000 aaKnown RBP1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 LOC100130705A0A1B0GUX0 176 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 NUPR2A6NF83 97 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 HIGD1CA8MV81 97 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 MCRIP1C9JLW8 97 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 IFNA17P01571 189 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 SLC25A6P12236 298 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 PDE6GP18545 87 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 PCOTHQ58A44 107 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 CSAG1Q6PB30 78 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 SVBPQ8N300 66 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 RPRMQ9NS64 109 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 IER3IP1Q9Y5U9 82 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 COL5A3P25940 1745 aaPredicted RBP1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 DAPK1P53355 1430 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 ERBINQ96RT1 1412 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 BCL9LQ86UU0 1499 aa1.56□□□□□ -2.16
SPTLC1-203ENST00000461132 MYOFQ9NZM1 2061 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 PCNX2A6NKB5 2137 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 KIDINS220Q9ULH0 1771 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 KIAA1549LQ6ZVL6 1849 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 PLXNA4Q9HCM2 1894 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 PITX3O75364 302 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 SMIM6P0DI80 62 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 CBLN1P23435 193 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 Q6AWC8 147 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 C4orf33Q8N1A6 199 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 PPP1R1CQ8WVI7 109 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 INTS1Q8N201 2190 aaKnown RBP1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 MBD5Q9P267 1494 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 ADGRB1O14514 1584 aa1.55□□□□□ -2.16
SPTLC1-203ENST00000461132 FBN1P35555 2871 aaKnown RBP1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 TCRBV3S1A0A5B6 114 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 J3QKU1 62 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 CCKP06307 115 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 PRB4P10163 310 aaPredicted RBP1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 RBP2P50120 134 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 CATR1Q13166 79 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 SPRNQ5BIV9 151 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 SLC48A1Q6P1K1 146 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 C8orf59Q8N0T1 100 aaPredicted RBP1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 LIMD2Q9BT23 127 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 MRPL35Q9NZE8 188 aaKnown RBP1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 C22orf24Q9Y442 160 aa1.54□□□□□ -2.16
SPTLC1-203ENST00000461132 CXorf51AA0A1B0GTR3 108 aa1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 WDR97A6NE52 1622 aa1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 ADGRB2O60241 1585 aa1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 IGLV3-1P01715 115 aa1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 C9orf116Q5BN46 136 aaPredicted RBP1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 C9orf153Q5TBE3 101 aa1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 UNC13CQ8NB66 2214 aa1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 TSKUQ8WUA8 353 aa1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 MYO18AQ92614 2054 aaKnown RBP1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 C14orf144Q96I85 54 aa1.53□□□□□ -2.16
SPTLC1-203ENST00000461132 ANK1P16157 1881 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 SIP14410 1827 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 KIF13AQ9H1H9 1805 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 PHLPP1O60346 1717 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 TEX49A0A1B0GTD5 131 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 TMEM218A2RU14 115 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 FAM24AA6NFZ4 105 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 S100A8P05109 93 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 NPC2P61916 151 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 UBE2G1P62253 170 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 CR1P17927 2039 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 TRPM7Q96QT4 1865 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 FOCADQ5VW36 1801 aa1.52□□□□□ -2.17
SPTLC1-203ENST00000461132 A2ML1A8K2U0 1454 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 MYOM2P54296 1465 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 EXPH5Q8NEV8 1989 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 BAHCC1Q9P281 2608 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 SPAARA0A1B0GVQ0 90 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 IFITM1P13164 125 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 FXYD4P59646 89 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 S100A7L2Q5SY68 101 aa1.51□□□□□ -2.17
SPTLC1-203ENST00000461132 CYP2G1PQ6ZSU1 146 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms