RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 FAM210BQ96KR6 192 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 DERL1Q9BUN8 251 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 SMDT1Q9H4I9 107 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 MDFICQ9P1T7 246 aa8.88□□□□□ -0.99
HDAC4-207ENST00000461113 XKRY2A2RUG3 117 aa8.87□□□□□ -0.99
HDAC4-207ENST00000461113 Q6ZTI0 123 aa8.87□□□□□ -0.99
HDAC4-207ENST00000461113 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
HDAC4-207ENST00000461113 PARLQ9H300 379 aa8.87□□□□□ -0.99
HDAC4-207ENST00000461113 KRBOX1C9JBD0 128 aa8.86□□□□□ -0.99
HDAC4-207ENST00000461113 C9JCJ5 164 aa8.86□□□□□ -0.99
HDAC4-207ENST00000461113 CRIP1P50238 77 aa8.86□□□□□ -0.99
HDAC4-207ENST00000461113 RPS20P60866 119 aaKnown RBP8.86□□□□□ -0.99
HDAC4-207ENST00000461113 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
HDAC4-207ENST00000461113 SYT8Q8NBV8 401 aa8.86□□□□□ -0.99
HDAC4-207ENST00000461113 NDUFAF3Q9BU61 184 aa8.86□□□□□ -0.99
HDAC4-207ENST00000461113 MRPL16Q9NX20 251 aaKnown RBP8.86□□□□□ -0.99
HDAC4-207ENST00000461113 PKD1P98161 4303 aa8.86□□□□□ -0.99
HDAC4-207ENST00000461113 TMSB15BA0A087X1C1 80 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 IGKV3D-20A0A0C4DH25 116 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 ZNF727A8MUV8 499 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 RTL8CO15255 209 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 P01737 135 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 SLAQ13239 276 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 FAM74A3Q4VXF1 159 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 MAPKAPK5-AS1Q8N8E1 139 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 RASL10AQ92737 203 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 C18orf15Q96N68 181 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 SMIM7Q9BQ49 75 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 C11orf21Q9P2W6 132 aa8.85□□□□□ -0.99
HDAC4-207ENST00000461113 IGHV4-4A0A075B6R2 117 aa8.84□□□□□ -0.99
HDAC4-207ENST00000461113 SRP19P09132 144 aaKnown RBP8.84□□□□□ -0.99
HDAC4-207ENST00000461113 ZNF876PQ49A33 203 aa8.84□□□□□ -0.99
HDAC4-207ENST00000461113 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
HDAC4-207ENST00000461113 IL36BQ9NZH7 164 aa8.84□□□□□ -0.99
HDAC4-207ENST00000461113 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -0.99
HDAC4-207ENST00000461113 LY96Q9Y6Y9 160 aa8.84□□□□□ -0.99
HDAC4-207ENST00000461113 TRGV4A0A0C4DH28 118 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 GRIFINA4D1Z8 144 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 H3BVH4 76 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 CIDEAO60543 219 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 CXCL1P09341 107 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 CLLU1Q5K131 121 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 DNLZQ5SXM8 178 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 C15orf53Q8NAA6 179 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 OR2D3Q8NGH3 330 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 OCC1Q8TAD7 63 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 PTH2Q96A98 100 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 C9orf85Q96MD7 179 aa8.83□□□□□ -1
HDAC4-207ENST00000461113 TRAV4A0A0B4J268 109 aa8.82□□□□□ -1
HDAC4-207ENST00000461113 IGHV3-53P01767 116 aa8.82□□□□□ -1
HDAC4-207ENST00000461113 ARMS2P0C7Q2 107 aa8.82□□□□□ -1
HDAC4-207ENST00000461113 SOHLH1Q5JUK2 328 aa8.82□□□□□ -1
HDAC4-207ENST00000461113 TMEM88Q6PEY1 159 aa8.82□□□□□ -1
HDAC4-207ENST00000461113 ZFP82Q8N141 532 aa8.82□□□□□ -1
HDAC4-207ENST00000461113 APLNQ9ULZ1 77 aa8.82□□□□□ -1
HDAC4-207ENST00000461113 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
HDAC4-207ENST00000461113 TRBV20OR9-2A0A075B6H5 130 aa8.81□□□□□ -1
HDAC4-207ENST00000461113 PGPEP1LA6NFU8 196 aa8.81□□□□□ -1
HDAC4-207ENST00000461113 A8MWV9 139 aa8.81□□□□□ -1
HDAC4-207ENST00000461113 IGLV2-8P01709 118 aa8.81□□□□□ -1
HDAC4-207ENST00000461113 RNASE3P12724 160 aaKnown RBP8.81□□□□□ -1
HDAC4-207ENST00000461113 TMEM241Q24JQ0 296 aa8.81□□□□□ -1
HDAC4-207ENST00000461113 PIK3CD-AS1Q5SR53 167 aa8.81□□□□□ -1
HDAC4-207ENST00000461113 NUDT3O95989 172 aa8.8□□□□□ -1
HDAC4-207ENST00000461113 ERVFC1-1P60608 527 aa8.8□□□□□ -1
HDAC4-207ENST00000461113 RPL19P84098 196 aaKnown RBP8.8□□□□□ -1
HDAC4-207ENST00000461113 SPANXN1Q5VSR9 72 aa8.8□□□□□ -1
HDAC4-207ENST00000461113 TPPP3Q9BW30 176 aa8.8□□□□□ -1
HDAC4-207ENST00000461113 PRO0255Q9UI72 69 aa8.8□□□□□ -1
HDAC4-207ENST00000461113 HHLA3Q9XRX5 114 aa8.8□□□□□ -1
HDAC4-207ENST00000461113 TRAV26-1A0A087WT03 109 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 A0A1W2PPQ1 181 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 C19orf71A6NCJ1 209 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 M0R2N4 97 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 M0R381 172 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 PAX4O43316 350 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 GATCO43716 136 aaKnown RBP8.79□□□□□ -1
HDAC4-207ENST00000461113 P0DMU3 169 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 FAM231AP0DMU4 169 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 FAM231CP0DMU5 169 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 C15orf54Q8N8G6 183 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 FER1L6-AS1Q8NA97 138 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 NUDT10Q8NFP7 164 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 NUDT11Q96G61 164 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 RPP21Q9H633 154 aaKnown RBP8.79□□□□□ -1
HDAC4-207ENST00000461113 NAT8Q9UHE5 227 aa8.79□□□□□ -1
HDAC4-207ENST00000461113 A0A0J9YY99 117 aa8.78□□□□□ -1
HDAC4-207ENST00000461113 F2Z2F3 143 aa8.78□□□□□ -1
HDAC4-207ENST00000461113 H3BNG1 76 aa8.78□□□□□ -1
HDAC4-207ENST00000461113 RHODO00212 210 aa8.78□□□□□ -1
HDAC4-207ENST00000461113 RS1O15537 224 aa8.78□□□□□ -1
HDAC4-207ENST00000461113 OR5AL1P0C617 328 aa8.78□□□□□ -1
HDAC4-207ENST00000461113 IFITM2Q01629 132 aa8.78□□□□□ -1
HDAC4-207ENST00000461113 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
HDAC4-207ENST00000461113 RNASE7Q9H1E1 156 aaKnown RBP8.78□□□□□ -1
HDAC4-207ENST00000461113 A8MWL6 223 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 K7EN84 100 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
HDAC4-207ENST00000461113 SFTA3P0C7M3 94 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms