RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TRAPPC2BP0DI82 140 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 SLC25A6P12236 298 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 ERHP84090 104 aaKnown RBP2.24□□□□□ -2.05
CCDC50-203ENST00000460064 IQCJQ1A5X6 159 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 C5orf38Q86SI9 138 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 SPTSSAQ969W0 71 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 BAHCC1Q9P281 2608 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 ERVK-7P63135 1459 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 SCAF11Q99590 1463 aaKnown RBP2.24□□□□□ -2.05
CCDC50-203ENST00000460064 MYH1P12882 1939 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 GREB1Q4ZG55 1949 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 CPSF1Q10570 1443 aaKnown RBP2.24□□□□□ -2.05
CCDC50-203ENST00000460064 TOP2BQ02880 1626 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 PSME4Q14997 1843 aa2.24□□□□□ -2.05
CCDC50-203ENST00000460064 CHD1O14646 1710 aa2.23□□□□□ -2.05
CCDC50-203ENST00000460064 ARAP2Q8WZ64 1704 aa2.23□□□□□ -2.05
CCDC50-203ENST00000460064 MPDZO75970 2070 aa2.23□□□□□ -2.05
CCDC50-203ENST00000460064 MAGI2Q86UL8 1455 aa2.23□□□□□ -2.05
CCDC50-203ENST00000460064 IFT140Q96RY7 1462 aa2.23□□□□□ -2.05
CCDC50-203ENST00000460064 MGST1P10620 155 aaKnown RBP2.23□□□□□ -2.05
CCDC50-203ENST00000460064 SSR2P43308 183 aa2.23□□□□□ -2.05
CCDC50-203ENST00000460064 RPL26P61254 145 aaKnown RBP2.23□□□□□ -2.05
CCDC50-203ENST00000460064 SLC25A26Q70HW3 274 aa2.23□□□□□ -2.05
CCDC50-203ENST00000460064 C10orf71Q711Q0 1435 aa2.23□□□□□ -2.05
CCDC50-203ENST00000460064 ABCC3O15438 1527 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 HMGXB3Q12766 1538 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 CACNA1GO43497 2377 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 CCDC88BA6NC98 1476 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 UBE2L5PA0A1B0GUS4 154 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 IGLC7A0M8Q6 106 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 J3QKU1 62 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 UBL3O95164 117 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 CBLN1P23435 193 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 UBE2L3P68036 154 aaKnown RBP2.22□□□□□ -2.05
CCDC50-203ENST00000460064 RBM3P98179 157 aaKnown RBP2.22□□□□□ -2.05
CCDC50-203ENST00000460064 C12orf73Q69YU5 71 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 C20orf78Q9BR46 151 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 UACAQ9BZF9 1416 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 COL5A3P25940 1745 aaPredicted RBP2.22□□□□□ -2.05
CCDC50-203ENST00000460064 ABCA3Q99758 1704 aa2.22□□□□□ -2.05
CCDC50-203ENST00000460064 PXDNLA1KZ92 1463 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 KIDINS220Q9ULH0 1771 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 hADV29S1A0JD25 119 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 IBA57-AS1B1ANH7 110 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 F8W1H4 67 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 SFT2D2O95562 160 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 CYB5AP00167 134 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 ASIPP42127 132 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 KRTAP12-1P59990 96 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 ZNF345Q14585 488 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 S100A7L2Q5SY68 101 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 ZNF826PQ6ZT77 177 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 LINC00301Q8NCQ3 95 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 S100A13Q99584 98 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 SMIM7Q9BQ49 75 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 PMCHL2Q9BQD1 86 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 C14orf132Q9NPU4 83 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 PRO2289Q9P1D8 64 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 LINC00474Q9P2X8 69 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 NDUFA12Q9UI09 145 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 TNRC6AQ8NDV7 1962 aaKnown RBP2.21□□□□□ -2.06
CCDC50-203ENST00000460064 PARP14Q460N5 1801 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 USP54Q70EL1 1684 aa2.21□□□□□ -2.06
CCDC50-203ENST00000460064 FANCD2Q9BXW9 1451 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 MALRD1Q5VYJ5 2156 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 A0A087WSZ3 146 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 E7EUB6 86 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 IGKCP01834 107 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 APOC3P02656 99 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 GYPAP02724 150 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 ADCYAP1P18509 176 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 ATP5EP56381 51 aaPredicted RBP2.2□□□□□ -2.06
CCDC50-203ENST00000460064 DSCR4P56555 118 aaPredicted RBP2.2□□□□□ -2.06
CCDC50-203ENST00000460064 DEFB113Q30KQ7 82 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 PCOTHQ58A44 107 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 COMMD6Q7Z4G1 85 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 ARPINQ7Z6K5 226 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 DYNLRB2Q8TF09 96 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 TSLPQ969D9 159 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 TIMM21Q9BVV7 248 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 UQCR10Q9UDW1 63 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 CHD3Q12873 2000 aaKnown RBP2.2□□□□□ -2.06
CCDC50-203ENST00000460064 ICE1Q9Y2F5 2266 aa2.2□□□□□ -2.06
CCDC50-203ENST00000460064 ADAMTS12P58397 1594 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 SCAPERQ9BY12 1400 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 CLASP1Q7Z460 1538 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 IGHV3-64A0A075B6Q5 118 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 TMSB15BA0A087X1C1 80 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 TRBV7-7A0A0K0K1E9 115 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 NUPR1O60356 82 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 CCKP06307 115 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 PIPP12273 146 aaPredicted RBP2.19□□□□□ -2.06
CCDC50-203ENST00000460064 RHOHQ15669 191 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 TPRXLQ17RH7 258 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 SPANXN1Q5VSR9 72 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 ZCCHC23Q6ZST2 131 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 Q6ZTI0 123 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 C15orf53Q8NAA6 179 aa2.19□□□□□ -2.06
CCDC50-203ENST00000460064 MUCL1Q96DR8 90 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms