RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 MED9Q9NWA0 146 aa14.38□□□□□ -0.11
VARS-218ENST00000459667 ICOSQ9Y6W8 199 aa14.38□□□□□ -0.11
VARS-218ENST00000459667 RNASE3P12724 160 aaKnown RBP14.37□□□□□ -0.11
VARS-218ENST00000459667 ZNF876PQ49A33 203 aa14.37□□□□□ -0.11
VARS-218ENST00000459667 BIRC6Q9NR09 4857 aa14.37□□□□□ -0.11
VARS-218ENST00000459667 M0R036 132 aa14.36□□□□□ -0.11
VARS-218ENST00000459667 ESRGQ1W209 222 aa14.36□□□□□ -0.11
VARS-218ENST00000459667 LYPD6BQ8NI32 183 aa14.36□□□□□ -0.11
VARS-218ENST00000459667 KRBOX1C9JBD0 128 aa14.35□□□□□ -0.11
VARS-218ENST00000459667 LINC01559Q495D7 138 aa14.35□□□□□ -0.11
VARS-218ENST00000459667 DERL1Q9BUN8 251 aa14.35□□□□□ -0.11
VARS-218ENST00000459667 MLST8Q9BVC4 326 aa14.35□□□□□ -0.11
VARS-218ENST00000459667 FRAS1Q86XX4 4008 aa14.35□□□□□ -0.11
VARS-218ENST00000459667 RBFOX3A6NFN3 312 aa14.34□□□□□ -0.11
VARS-218ENST00000459667 PGPEP1LA6NFU8 196 aa14.34□□□□□ -0.11
VARS-218ENST00000459667 GNG4P50150 75 aa14.34□□□□□ -0.11
VARS-218ENST00000459667 CENPWQ5EE01 88 aa14.34□□□□□ -0.11
VARS-218ENST00000459667 ZNF506Q5JVG8 444 aa14.34□□□□□ -0.11
VARS-218ENST00000459667 PRR27Q6MZM9 219 aa14.34□□□□□ -0.11
VARS-218ENST00000459667 PTH2Q96A98 100 aa14.34□□□□□ -0.11
VARS-218ENST00000459667 SMIM12Q96EX1 92 aa14.34□□□□□ -0.11
VARS-218ENST00000459667 MRPS16Q9Y3D3 137 aaKnown RBP14.34□□□□□ -0.11
VARS-218ENST00000459667 MRPL23Q16540 153 aaKnown RBP14.33□□□□□ -0.12
VARS-218ENST00000459667 UPK3BQ9BT76 320 aa14.33□□□□□ -0.12
VARS-218ENST00000459667 IL36BQ9NZH7 164 aa14.33□□□□□ -0.12
VARS-218ENST00000459667 NBDYA0A0U1RRE5 68 aa14.32□□□□□ -0.12
VARS-218ENST00000459667 RS1O15537 224 aa14.32□□□□□ -0.12
VARS-218ENST00000459667 DNLZQ5SXM8 178 aa14.32□□□□□ -0.12
VARS-218ENST00000459667 CFAP126Q5VTH2 177 aa14.32□□□□□ -0.12
VARS-218ENST00000459667 TEX261Q6UWH6 196 aa14.32□□□□□ -0.12
VARS-218ENST00000459667 LINC00336Q6ZUF6 198 aa14.32□□□□□ -0.12
VARS-218ENST00000459667 PCNPQ8WW12 178 aaKnown RBP14.32□□□□□ -0.12
VARS-218ENST00000459667 Q9H8V8 135 aa14.32□□□□□ -0.12
VARS-218ENST00000459667 BIN3Q9NQY0 253 aa14.32□□□□□ -0.12
VARS-218ENST00000459667 TMSB15BA0A087X1C1 80 aa14.31□□□□□ -0.12
VARS-218ENST00000459667 H3BVH4 76 aa14.31□□□□□ -0.12
VARS-218ENST00000459667 K7EQD1 137 aa14.31□□□□□ -0.12
VARS-218ENST00000459667 RTL8CO15255 209 aa14.31□□□□□ -0.12
VARS-218ENST00000459667 CIDEAO60543 219 aa14.31□□□□□ -0.12
VARS-218ENST00000459667 MGST1P10620 155 aaKnown RBP14.31□□□□□ -0.12
VARS-218ENST00000459667 GYPEP15421 78 aa14.31□□□□□ -0.12
VARS-218ENST00000459667 SYT8Q8NBV8 401 aa14.31□□□□□ -0.12
VARS-218ENST00000459667 DAZAP1Q96EP5 407 aaKnown RBP14.31□□□□□ -0.12
VARS-218ENST00000459667 RAB19A4D1S5 217 aa14.3□□□□□ -0.12
VARS-218ENST00000459667 GRIFINA4D1Z8 144 aa14.3□□□□□ -0.12
VARS-218ENST00000459667 TMEM250H0YL14 139 aa14.3□□□□□ -0.12
VARS-218ENST00000459667 GATA1P15976 413 aaPredicted RBP14.3□□□□□ -0.12
VARS-218ENST00000459667 SRIP30626 198 aa14.3□□□□□ -0.12
VARS-218ENST00000459667 PIK3CD-AS1Q5SR53 167 aa14.3□□□□□ -0.12
VARS-218ENST00000459667 NEGR1Q7Z3B1 354 aa14.3□□□□□ -0.12
VARS-218ENST00000459667 EIF5A2Q9GZV4 153 aaKnown RBP14.3□□□□□ -0.12
VARS-218ENST00000459667 CXCL1P09341 107 aa14.29□□□□□ -0.12
VARS-218ENST00000459667 ARMS2P0C7Q2 107 aa14.29□□□□□ -0.12
VARS-218ENST00000459667 TOR2AQ5JU69 321 aa14.29□□□□□ -0.12
VARS-218ENST00000459667 SOHLH1Q5JUK2 328 aa14.29□□□□□ -0.12
VARS-218ENST00000459667 PHLDA3Q9Y5J5 127 aa14.29□□□□□ -0.12
VARS-218ENST00000459667 IGHV3-73A0A0B4J1V6 119 aa14.28□□□□□ -0.12
VARS-218ENST00000459667 C1orf134Q5TEV5 83 aa14.28□□□□□ -0.12
VARS-218ENST00000459667 DNAH2Q9P225 4427 aa14.27□□□□□ -0.12
VARS-218ENST00000459667 LOC100131303A0A0U1RQF7 123 aa14.27□□□□□ -0.13
VARS-218ENST00000459667 A8MWV9 139 aa14.27□□□□□ -0.13
VARS-218ENST00000459667 IGLV2-8P01709 118 aa14.27□□□□□ -0.13
VARS-218ENST00000459667 MED14OSP0DP75 135 aa14.27□□□□□ -0.13
VARS-218ENST00000459667 LYPD5Q6UWN5 251 aa14.27□□□□□ -0.13
VARS-218ENST00000459667 FAM210AQ96ND0 272 aa14.27□□□□□ -0.13
VARS-218ENST00000459667 PRSS29PA6NIE9 313 aa14.26□□□□□ -0.13
VARS-218ENST00000459667 NDUFS6O75380 124 aaKnown RBP14.26□□□□□ -0.13
VARS-218ENST00000459667 TTC32Q5I0X7 151 aa14.26□□□□□ -0.13
VARS-218ENST00000459667 ZNF575Q86XF7 245 aa14.26□□□□□ -0.13
VARS-218ENST00000459667 SLC25A29Q8N8R3 303 aa14.26□□□□□ -0.13
VARS-218ENST00000459667 TRBV6-4A0A1B0GX49 114 aa14.25□□□□□ -0.13
VARS-218ENST00000459667 NXPH4O95158 308 aa14.25□□□□□ -0.13
VARS-218ENST00000459667 CEBPGP53567 150 aa14.25□□□□□ -0.13
VARS-218ENST00000459667 RPS20P60866 119 aaKnown RBP14.25□□□□□ -0.13
VARS-218ENST00000459667 RPL19P84098 196 aaKnown RBP14.25□□□□□ -0.13
VARS-218ENST00000459667 RHOHQ15669 191 aa14.25□□□□□ -0.13
VARS-218ENST00000459667 ZFP82Q8N141 532 aa14.25□□□□□ -0.13
VARS-218ENST00000459667 PARLQ9H300 379 aa14.25□□□□□ -0.13
VARS-218ENST00000459667 TRBV20OR9-2A0A075B6H5 130 aa14.24□□□□□ -0.13
VARS-218ENST00000459667 XKRY2A2RUG3 117 aa14.24□□□□□ -0.13
VARS-218ENST00000459667 DMRTA1Q5VZB9 504 aa14.24□□□□□ -0.13
VARS-218ENST00000459667 C6orf223Q8N319 242 aa14.24□□□□□ -0.13
VARS-218ENST00000459667 PRADC1Q9BSG0 188 aa14.24□□□□□ -0.13
VARS-218ENST00000459667 SCRT2Q9NQ03 307 aa14.24□□□□□ -0.13
VARS-218ENST00000459667 DNAH17Q9UFH2 4485 aa14.24□□□□□ -0.13
VARS-218ENST00000459667 SIVA1O15304 175 aa14.23□□□□□ -0.13
VARS-218ENST00000459667 P01737 135 aa14.23□□□□□ -0.13
VARS-218ENST00000459667 ZFP2Q6ZN57 461 aa14.23□□□□□ -0.13
VARS-218ENST00000459667 SH2D6Q7Z4S9 175 aa14.23□□□□□ -0.13
VARS-218ENST00000459667 KRTAP1-5Q9BYS1 174 aa14.23□□□□□ -0.13
VARS-218ENST00000459667 JPT2Q9H910 190 aa14.23□□□□□ -0.13
VARS-218ENST00000459667 A0A1W2PPQ1 181 aa14.22□□□□□ -0.13
VARS-218ENST00000459667 M0R381 172 aa14.22□□□□□ -0.13
VARS-218ENST00000459667 RHODO00212 210 aa14.22□□□□□ -0.13
VARS-218ENST00000459667 OR2D3Q8NGH3 330 aa14.22□□□□□ -0.13
VARS-218ENST00000459667 C19orf71A6NCJ1 209 aa14.21□□□□□ -0.13
VARS-218ENST00000459667 SAMD10Q9BYL1 202 aa14.21□□□□□ -0.13
VARS-218ENST00000459667 HECTD4Q9Y4D8 3996 aa14.21□□□□□ -0.13
VARS-218ENST00000459667 FAT2Q9NYQ8 4349 aa14.2□□□□□ -0.14
VARS-218ENST00000459667 OR5AL1P0C617 328 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms