RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 COL16A1Q07092 1604 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 TRAV3A0A0B4J244 114 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 A0A1W2PPM0 123 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 IGHV3-53P01767 116 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 CRPP02741 224 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 IGLV7-43P04211 117 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 FAUP35544 74 aaKnown RBP2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 CCL8P80075 99 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 RBM3P98179 157 aaKnown RBP2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 HMGN3Q15651 99 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 Q1T7F1 81 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 C15orf32Q32M92 178 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 BVES-AS1Q5T3Y7 98 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 C1orf134Q5TEV5 83 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 HEPN1Q6WQI6 88 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 ARPINQ7Z6K5 226 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 FAM213BQ8TBF2 198 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 DYNLRB2Q8TF09 96 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 MGST2Q99735 147 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 CXCL16Q9H2A7 254 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 C14orf132Q9NPU4 83 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 CACFD1Q9UGQ2 172 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 CPAMD8Q8IZJ3 1885 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 EFCAB5A4FU69 1503 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 LTBP2Q14767 1821 aa2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 MUC22E2RYF6 1773 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 BLMP54132 1417 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P30-201ENST00000457863 CASP8AP2Q9UKL3 1982 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 LRP5O75197 1615 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 PLXNA1Q9UIW2 1896 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 IGKV1D-42A0A075B6H8 117 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 PIGBOS1A0A0B4J2F0 54 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 HMSDA8MTL9 139 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 C5orf67F2Z3F1 127 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 IGLV1-47P01700 117 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 ADCYAP1P18509 176 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 KRTDAPP60985 99 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 ZNF816Q0VGE8 651 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 S100A7L2Q5SY68 101 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 NDUFB11Q9NX14 153 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 MRPL35Q9NZE8 188 aaKnown RBP2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 NDUFA12Q9UI09 145 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 STRCP1A6NGW2 1772 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 EXPH5Q8NEV8 1989 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 RGPD1P0DJD0 1748 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 ITSN1Q15811 1721 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 ATP10BO94823 1461 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 FANCD2Q9BXW9 1451 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 NUMA1Q14980 2115 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 MYO16Q9Y6X6 1858 aa2.5□□□□□ -2.01
HMGB3P30-201ENST00000457863 UNC13BO14795 1591 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 TRBV6-6A0A0A6YYG2 114 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 TRAV2A0A0B4J234 112 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 LOC107984156A0A0G2JMH3 177 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 A0A0J9YWU9 116 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 C11orf86A6NJI1 115 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 ZNF345Q14585 488 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 ETDBQ3ZM63 59 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 HMGN2P46Q86SG4 172 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 ARL17AQ8IVW1 177 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 SERP2Q8N6R1 65 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 Q8NAQ8 132 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 MUCL1Q96DR8 90 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 TMEM141Q96I45 108 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 CYTL1Q9NRR1 136 aa2.49□□□□□ -2.01
HMGB3P30-201ENST00000457863 ABCC1P33527 1531 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 CDK13Q14004 1512 aaKnown RBP2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 MGAMO43451 1857 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 LRRC9Q6ZRR7 1453 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 A0A087WSZ3 146 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 IGHV1-18A0A0C4DH31 117 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 A0A1B0GU33 70 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 A0A1B0GVY2 172 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 NAP1L6A6NFF2 107 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 SYS1-DBNDD2H3BUS1 97 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 IL4P05112 153 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 MGST1P10620 155 aaKnown RBP2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 EIF4EBP1Q13541 118 aaPredicted RBP2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 CASC2Q6XLA1 102 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 TMEM136Q6ZRR5 245 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 Q6ZS52 159 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 ZNF826PQ6ZT77 177 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 CYB561D1Q8N8Q1 229 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 ST20-AS1Q8NBB2 130 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 UBALD1Q8TB05 177 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 C20orf166-AS1Q96NR2 134 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 TRGV9Q99603 122 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 LINC00474Q9P2X8 69 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 PRO0461Q9UI25 63 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 SMAD5-AS1Q9Y6J3 95 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 ABCA6Q8N139 1617 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 EDC4Q6P2E9 1401 aaKnown RBP2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 KIAA2026Q5HYC2 2103 aa2.48□□□□□ -2.01
HMGB3P30-201ENST00000457863 MED12LQ86YW9 2145 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 TRAV17A0A0B4J275 112 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 C16orf90A8MZG2 172 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 CCL16O15467 120 aa2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 DSCR4P56555 118 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P30-201ENST00000457863 SPATA45Q537H7 98 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms