RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 ARL14EPLP0DKL9 152 aa11.07□□□□□ -0.64
TVP23A-202ENST00000456096 LINC00528Q8N1L1 170 aa11.07□□□□□ -0.64
TVP23A-202ENST00000456096 PTH2Q96A98 100 aa11.07□□□□□ -0.64
TVP23A-202ENST00000456096 PSG8Q9UQ74 426 aa11.07□□□□□ -0.64
TVP23A-202ENST00000456096 TRAV8-3A0A0A6YYJ7 113 aa11.06□□□□□ -0.64
TVP23A-202ENST00000456096 SERTM2A0A1B0GWG4 89 aa11.06□□□□□ -0.64
TVP23A-202ENST00000456096 IGLV2-11P01706 119 aa11.06□□□□□ -0.64
TVP23A-202ENST00000456096 RNASE3P12724 160 aaKnown RBP11.06□□□□□ -0.64
TVP23A-202ENST00000456096 C5orf17Q8NAS9 161 aa11.06□□□□□ -0.64
TVP23A-202ENST00000456096 MARVELD1Q9BSK0 173 aa11.06□□□□□ -0.64
TVP23A-202ENST00000456096 FAT3Q8TDW7 4589 aa11.05□□□□□ -0.64
TVP23A-202ENST00000456096 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.05□□□□□ -0.64
TVP23A-202ENST00000456096 SMUG1Q53HV7 270 aa11.05□□□□□ -0.64
TVP23A-202ENST00000456096 DAZ4Q86SG3 579 aaKnown RBP11.05□□□□□ -0.64
TVP23A-202ENST00000456096 PRNTQ86SH4 94 aa11.05□□□□□ -0.64
TVP23A-202ENST00000456096 DAZ3Q9NR90 486 aaKnown RBP11.05□□□□□ -0.64
TVP23A-202ENST00000456096 GAGE12JA6NER3 117 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 KRTAP29-1A8MX34 341 aaPredicted RBP11.04□□□□□ -0.64
TVP23A-202ENST00000456096 K7EQM0 130 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 STAG3L2P0CL84 134 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 STAG3L3P0CL85 134 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 CDC34P49427 236 aaPredicted RBP11.04□□□□□ -0.64
TVP23A-202ENST00000456096 FLI1Q01543 452 aaPredicted RBP11.04□□□□□ -0.64
TVP23A-202ENST00000456096 GAGE1Q13065 139 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 GAGE4Q13068 117 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 GAGE5Q13069 117 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 SUN5Q8TC36 379 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 PARLQ9H300 379 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 Q9UF83 564 aa11.04□□□□□ -0.64
TVP23A-202ENST00000456096 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 GCHFRP30047 84 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 SUMO1P63165 101 aaKnown RBP11.03□□□□□ -0.64
TVP23A-202ENST00000456096 ZFP69Q49AA0 526 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 LINC01620Q4KN68 170 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 ZFP2Q6ZN57 461 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 OR2T35Q8NGX2 323 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 BAALCQ8WXS3 180 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 RAB24Q969Q5 203 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 SH3BGRL3Q9H299 93 aa11.03□□□□□ -0.64
TVP23A-202ENST00000456096 A8MWV9 139 aa11.02□□□□□ -0.65
TVP23A-202ENST00000456096 LGALSLQ3ZCW2 172 aaPredicted RBP11.02□□□□□ -0.65
TVP23A-202ENST00000456096 TOR2AQ5JU69 321 aa11.02□□□□□ -0.65
TVP23A-202ENST00000456096 DEFB104AQ8WTQ1 72 aa11.02□□□□□ -0.65
TVP23A-202ENST00000456096 EPDR1Q9UM22 224 aa11.02□□□□□ -0.65
TVP23A-202ENST00000456096 PKHD1L1Q86WI1 4243 aa11.02□□□□□ -0.65
TVP23A-202ENST00000456096 IGKV3D-20A0A0C4DH25 116 aa11.01□□□□□ -0.65
TVP23A-202ENST00000456096 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
TVP23A-202ENST00000456096 CYB561D1Q8N8Q1 229 aa11.01□□□□□ -0.65
TVP23A-202ENST00000456096 HSD17B11Q8NBQ5 300 aa11.01□□□□□ -0.65
TVP23A-202ENST00000456096 OR2G3Q8NGZ4 309 aa11.01□□□□□ -0.65
TVP23A-202ENST00000456096 SAMD10Q9BYL1 202 aa11.01□□□□□ -0.65
TVP23A-202ENST00000456096 JPT2Q9H910 190 aa11.01□□□□□ -0.65
TVP23A-202ENST00000456096 HMCN2Q8NDA2 5059 aa11.01□□□□□ -0.65
TVP23A-202ENST00000456096 A0A087WWC5 75 aa11□□□□□ -0.65
TVP23A-202ENST00000456096 S100A4P26447 101 aaKnown RBP11□□□□□ -0.65
TVP23A-202ENST00000456096 SAPCD1Q5SSQ6 148 aa11□□□□□ -0.65
TVP23A-202ENST00000456096 SCXQ7RTU7 201 aa11□□□□□ -0.65
TVP23A-202ENST00000456096 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
TVP23A-202ENST00000456096 DNAJC30Q96LL9 226 aa11□□□□□ -0.65
TVP23A-202ENST00000456096 LINC00479Q96M42 142 aa11□□□□□ -0.65
TVP23A-202ENST00000456096 RBFOX3A6NFN3 312 aa10.99□□□□□ -0.65
TVP23A-202ENST00000456096 PIK3CD-AS1Q5SR53 167 aa10.99□□□□□ -0.65
TVP23A-202ENST00000456096 UFSP1Q6NVU6 142 aa10.99□□□□□ -0.65
TVP23A-202ENST00000456096 COX11Q9Y6N1 276 aa10.99□□□□□ -0.65
TVP23A-202ENST00000456096 TRAV34A0A0B4J273 112 aa10.98□□□□□ -0.65
TVP23A-202ENST00000456096 CXorf1O96002 111 aa10.98□□□□□ -0.65
TVP23A-202ENST00000456096 ATP6V0CP27449 155 aa10.98□□□□□ -0.65
TVP23A-202ENST00000456096 FGF8P55075 233 aaPredicted RBP10.98□□□□□ -0.65
TVP23A-202ENST00000456096 PSMG3Q9BT73 122 aaPredicted RBP10.98□□□□□ -0.65
TVP23A-202ENST00000456096 TMEM167BQ9NRX6 74 aa10.98□□□□□ -0.65
TVP23A-202ENST00000456096 IGKV2D-24A0A075B6R9 120 aa10.97□□□□□ -0.65
TVP23A-202ENST00000456096 RNF222A6NCQ9 220 aa10.97□□□□□ -0.65
TVP23A-202ENST00000456096 FABP5P3A8MUU1 101 aa10.97□□□□□ -0.65
TVP23A-202ENST00000456096 ASIPP42127 132 aa10.97□□□□□ -0.65
TVP23A-202ENST00000456096 DMRTA1Q5VZB9 504 aa10.97□□□□□ -0.65
TVP23A-202ENST00000456096 Q8N976 141 aa10.97□□□□□ -0.65
TVP23A-202ENST00000456096 RMI2Q96E14 147 aa10.97□□□□□ -0.65
TVP23A-202ENST00000456096 URGCP-MRPS24S4R325 110 aa10.97□□□□□ -0.65
TVP23A-202ENST00000456096 MBP02144 154 aa10.96□□□□□ -0.65
TVP23A-202ENST00000456096 KRTAP10-4P60372 401 aaPredicted RBP10.96□□□□□ -0.65
TVP23A-202ENST00000456096 NIT1Q86X76 327 aa10.96□□□□□ -0.65
TVP23A-202ENST00000456096 CHAC1Q9BUX1 264 aa10.96□□□□□ -0.65
TVP23A-202ENST00000456096 ACTR3CQ9C0K3 210 aaPredicted RBP10.96□□□□□ -0.65
TVP23A-202ENST00000456096 IL36BQ9NZH7 164 aa10.96□□□□□ -0.65
TVP23A-202ENST00000456096 KLK12Q9UKR0 248 aa10.96□□□□□ -0.65
TVP23A-202ENST00000456096 ARL2-SNX15V9GYD0 113 aa10.96□□□□□ -0.65
TVP23A-202ENST00000456096 B4DEV8 164 aa10.95□□□□□ -0.66
TVP23A-202ENST00000456096 H3BVH4 76 aa10.95□□□□□ -0.66
TVP23A-202ENST00000456096 SERF2P84101 59 aa10.95□□□□□ -0.66
TVP23A-202ENST00000456096 UBR4Q5T4S7 5183 aa10.95□□□□□ -0.66
TVP23A-202ENST00000456096 A0A1W2PRE2 83 aa10.94□□□□□ -0.66
TVP23A-202ENST00000456096 DEFA1P59665 94 aa10.94□□□□□ -0.66
TVP23A-202ENST00000456096 DEFA3P59666 94 aa10.94□□□□□ -0.66
TVP23A-202ENST00000456096 UBE2WQ96B02 151 aa10.94□□□□□ -0.66
TVP23A-202ENST00000456096 KRBOX1C9JBD0 128 aa10.93□□□□□ -0.66
TVP23A-202ENST00000456096 RHODO00212 210 aa10.93□□□□□ -0.66
TVP23A-202ENST00000456096 IFNA7P01567 189 aa10.93□□□□□ -0.66
TVP23A-202ENST00000456096 ARMS2P0C7Q2 107 aa10.93□□□□□ -0.66
TVP23A-202ENST00000456096 SEC11BP0C7V7 166 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms