RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 GOLT1AQ6ZVE7 132 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 ARL6IP6Q8N6S5 226 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 CMTM2Q8TAZ6 248 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 TREM1Q9NP99 234 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 RPH3ALQ9UNE2 315 aa11.3□□□□□ -0.6
PTPRN-209ENST00000451506 Q5BKY6 102 aa11.29□□□□□ -0.6
PTPRN-209ENST00000451506 Q8N3U1 123 aa11.29□□□□□ -0.6
PTPRN-209ENST00000451506 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
PTPRN-209ENST00000451506 IGHV3-73A0A0B4J1V6 119 aa11.28□□□□□ -0.6
PTPRN-209ENST00000451506 TAAR5O14804 337 aa11.28□□□□□ -0.6
PTPRN-209ENST00000451506 ATP6V0E2Q8NHE4 81 aa11.28□□□□□ -0.6
PTPRN-209ENST00000451506 C11orf21Q9P2W6 132 aa11.28□□□□□ -0.6
PTPRN-209ENST00000451506 LECT2O14960 151 aa11.27□□□□□ -0.61
PTPRN-209ENST00000451506 STAG3L2P0CL84 134 aa11.27□□□□□ -0.61
PTPRN-209ENST00000451506 STAG3L3P0CL85 134 aa11.27□□□□□ -0.61
PTPRN-209ENST00000451506 ARL14EPLP0DKL9 152 aa11.27□□□□□ -0.61
PTPRN-209ENST00000451506 SERTM2A0A1B0GWG4 89 aa11.26□□□□□ -0.61
PTPRN-209ENST00000451506 G3V3Q6 166 aa11.26□□□□□ -0.61
PTPRN-209ENST00000451506 MGST1P10620 155 aaKnown RBP11.26□□□□□ -0.61
PTPRN-209ENST00000451506 ZNF80P51504 273 aaPredicted RBP11.26□□□□□ -0.61
PTPRN-209ENST00000451506 GNG5P63218 68 aa11.26□□□□□ -0.61
PTPRN-209ENST00000451506 RPL7L1Q6DKI1 246 aaKnown RBP11.26□□□□□ -0.61
PTPRN-209ENST00000451506 C9orf85Q96MD7 179 aa11.26□□□□□ -0.61
PTPRN-209ENST00000451506 ACTR3CQ9C0K3 210 aaPredicted RBP11.26□□□□□ -0.61
PTPRN-209ENST00000451506 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
PTPRN-209ENST00000451506 TRAV8-3A0A0A6YYJ7 113 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 PGPEP1LA6NFU8 196 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 ARPC5O15511 151 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 CXorf1O96002 111 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 KRTAP10-4P60372 401 aaPredicted RBP11.25□□□□□ -0.61
PTPRN-209ENST00000451506 ZNF345Q14585 488 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 SCXQ7RTU7 201 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 RAB24Q969Q5 203 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 PTH2Q96A98 100 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 SH3BGRL3Q9H299 93 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 HMCN2Q8NDA2 5059 aa11.25□□□□□ -0.61
PTPRN-209ENST00000451506 LRP1Q07954 4544 aaKnown RBP11.24□□□□□ -0.61
PTPRN-209ENST00000451506 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.24□□□□□ -0.61
PTPRN-209ENST00000451506 LINC00694P0DN24 101 aa11.24□□□□□ -0.61
PTPRN-209ENST00000451506 GCHFRP30047 84 aa11.24□□□□□ -0.61
PTPRN-209ENST00000451506 LINC01620Q4KN68 170 aa11.24□□□□□ -0.61
PTPRN-209ENST00000451506 ZNF506Q5JVG8 444 aa11.24□□□□□ -0.61
PTPRN-209ENST00000451506 SERTAD4-AS1Q5TG53 156 aa11.24□□□□□ -0.61
PTPRN-209ENST00000451506 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
PTPRN-209ENST00000451506 SUN5Q8TC36 379 aa11.24□□□□□ -0.61
PTPRN-209ENST00000451506 SGK494Q96LW2 274 aa11.24□□□□□ -0.61
PTPRN-209ENST00000451506 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
PTPRN-209ENST00000451506 K7EQM0 130 aa11.23□□□□□ -0.61
PTPRN-209ENST00000451506 TMEM75Q8N9X5 138 aa11.23□□□□□ -0.61
PTPRN-209ENST00000451506 C5orf17Q8NAS9 161 aa11.23□□□□□ -0.61
PTPRN-209ENST00000451506 CTXND1A0A1B0GTU2 59 aa11.22□□□□□ -0.61
PTPRN-209ENST00000451506 HMGB3O15347 200 aaKnown RBP11.22□□□□□ -0.61
PTPRN-209ENST00000451506 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
PTPRN-209ENST00000451506 AKR1C8PQ5T2L2 129 aa11.22□□□□□ -0.61
PTPRN-209ENST00000451506 BAALCQ8WXS3 180 aa11.22□□□□□ -0.61
PTPRN-209ENST00000451506 NDFIP1Q9BT67 221 aa11.22□□□□□ -0.61
PTPRN-209ENST00000451506 GCGP01275 180 aa11.21□□□□□ -0.61
PTPRN-209ENST00000451506 TOR2AQ5JU69 321 aa11.21□□□□□ -0.61
PTPRN-209ENST00000451506 Q9UF83 564 aa11.21□□□□□ -0.61
PTPRN-209ENST00000451506 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 HMSDA8MTL9 139 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 IGLV2-11P01706 119 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 TCRAP04437 139 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 GAGE1Q13065 139 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 GAGE4Q13068 117 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 GAGE5Q13069 117 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 GAGE13Q4V321 117 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 KCNRGQ8N5I3 272 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 SYT8Q8NBV8 401 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 PARLQ9H300 379 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 COX11Q9Y6N1 276 aa11.2□□□□□ -0.62
PTPRN-209ENST00000451506 A0A1W2PRE2 83 aa11.19□□□□□ -0.62
PTPRN-209ENST00000451506 GGTLC3B5MD39 225 aa11.19□□□□□ -0.62
PTPRN-209ENST00000451506 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
PTPRN-209ENST00000451506 A0A087WWC5 75 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 A0A0D9SG52 128 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 RBFOX3A6NFN3 312 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 OXTP01178 125 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 CYB561D1Q8N8Q1 229 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 Q8N976 141 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 CIRBP-AS1Q8TBR5 109 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 LINC00479Q96M42 142 aa11.18□□□□□ -0.62
PTPRN-209ENST00000451506 NKX6-2Q9C056 277 aaPredicted RBP11.18□□□□□ -0.62
PTPRN-209ENST00000451506 KANTRA0A1W2PQU2 76 aa11.17□□□□□ -0.62
PTPRN-209ENST00000451506 A8MWV9 139 aa11.17□□□□□ -0.62
PTPRN-209ENST00000451506 EIF5AP63241 154 aaKnown RBP11.17□□□□□ -0.62
PTPRN-209ENST00000451506 SMUG1Q53HV7 270 aa11.17□□□□□ -0.62
PTPRN-209ENST00000451506 PIK3CD-AS1Q5SR53 167 aa11.17□□□□□ -0.62
PTPRN-209ENST00000451506 UFSP1Q6NVU6 142 aa11.17□□□□□ -0.62
PTPRN-209ENST00000451506 CYTL1Q9NRR1 136 aa11.17□□□□□ -0.62
PTPRN-209ENST00000451506 UBR4Q5T4S7 5183 aa11.17□□□□□ -0.62
PTPRN-209ENST00000451506 FAT3Q8TDW7 4589 aa11.17□□□□□ -0.62
PTPRN-209ENST00000451506 MAP1LC3B2A6NCE7 125 aa11.16□□□□□ -0.62
PTPRN-209ENST00000451506 SMLR1H3BR10 107 aa11.16□□□□□ -0.62
PTPRN-209ENST00000451506 BCL2L11O43521 198 aa11.16□□□□□ -0.62
PTPRN-209ENST00000451506 FLI1Q01543 452 aaPredicted RBP11.16□□□□□ -0.62
PTPRN-209ENST00000451506 ZNF726P1Q15940 193 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms