RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 HSPG2P98160 4391 aa10.16□□□□□ -0.78
USP39-206ENST00000448971 B4DEV8 164 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 C9JCJ5 164 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 M0R036 132 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 SH2D1AO60880 128 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 ORM1P02763 201 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 S100A9P06702 114 aaKnown RBP10.15□□□□□ -0.78
USP39-206ENST00000448971 ASIPP42127 132 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 FAM162BQ5T6X4 162 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 ALKAL2Q6UX46 152 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 KRTAP4-5Q9BYR2 181 aa10.15□□□□□ -0.78
USP39-206ENST00000448971 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 IGKV3D-20A0A0C4DH25 116 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 PRSS29PA6NIE9 313 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 H3BNG1 76 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 PAX4O43316 350 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 OR4C5Q8NGB2 326 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 ZNF479Q96JC4 524 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 PRO0255Q9UI72 69 aa10.14□□□□□ -0.79
USP39-206ENST00000448971 BCL2P10415 239 aa10.13□□□□□ -0.79
USP39-206ENST00000448971 MEF2BQ02080 365 aaPredicted RBP10.13□□□□□ -0.79
USP39-206ENST00000448971 SLAQ13239 276 aa10.13□□□□□ -0.79
USP39-206ENST00000448971 ZNF876PQ49A33 203 aa10.13□□□□□ -0.79
USP39-206ENST00000448971 VSIG2Q96IQ7 327 aa10.13□□□□□ -0.79
USP39-206ENST00000448971 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
USP39-206ENST00000448971 TXNDC17Q9BRA2 123 aa10.13□□□□□ -0.79
USP39-206ENST00000448971 ICOSQ9Y6W8 199 aa10.13□□□□□ -0.79
USP39-206ENST00000448971 TMSB15BA0A087X1C1 80 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 H3BVH4 76 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 M0R2N4 97 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 RNASE3P12724 160 aaKnown RBP10.12□□□□□ -0.79
USP39-206ENST00000448971 RPL35P42766 123 aaKnown RBP10.12□□□□□ -0.79
USP39-206ENST00000448971 FAM3BP58499 235 aaPredicted RBP10.12□□□□□ -0.79
USP39-206ENST00000448971 FHL2Q14192 279 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 PRR27Q6MZM9 219 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 COX8CQ7Z4L0 72 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 BAGE2Q86Y30 109 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
USP39-206ENST00000448971 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 HHLA3Q9XRX5 114 aa10.12□□□□□ -0.79
USP39-206ENST00000448971 CRIP1P50238 77 aa10.11□□□□□ -0.79
USP39-206ENST00000448971 CRYBA4P53673 196 aa10.11□□□□□ -0.79
USP39-206ENST00000448971 ZNF674Q2M3X9 581 aa10.11□□□□□ -0.79
USP39-206ENST00000448971 ZNF506Q5JVG8 444 aa10.11□□□□□ -0.79
USP39-206ENST00000448971 ANAPC16Q96DE5 110 aa10.11□□□□□ -0.79
USP39-206ENST00000448971 DERL1Q9BUN8 251 aa10.11□□□□□ -0.79
USP39-206ENST00000448971 LINC00588Q9Y4M8 146 aa10.11□□□□□ -0.79
USP39-206ENST00000448971 A0A096LPF7 62 aa10.1□□□□□ -0.79
USP39-206ENST00000448971 GRIFINA4D1Z8 144 aa10.1□□□□□ -0.79
USP39-206ENST00000448971 KRBOX1C9JBD0 128 aa10.1□□□□□ -0.79
USP39-206ENST00000448971 PDE6DO43924 150 aa10.1□□□□□ -0.79
USP39-206ENST00000448971 BLOC1S1P78537 153 aa10.1□□□□□ -0.79
USP39-206ENST00000448971 CENPWQ5EE01 88 aa10.1□□□□□ -0.79
USP39-206ENST00000448971 VAX2Q9UIW0 290 aa10.1□□□□□ -0.79
USP39-206ENST00000448971 PGPEP1LA6NFU8 196 aa10.09□□□□□ -0.79
USP39-206ENST00000448971 SRIP30626 198 aa10.09□□□□□ -0.79
USP39-206ENST00000448971 TAGLN2P37802 199 aaKnown RBP10.09□□□□□ -0.79
USP39-206ENST00000448971 IL36BQ9NZH7 164 aa10.09□□□□□ -0.79
USP39-206ENST00000448971 IGHV3-73A0A0B4J1V6 119 aa10.08□□□□□ -0.8
USP39-206ENST00000448971 RS1O15537 224 aa10.08□□□□□ -0.8
USP39-206ENST00000448971 MGST1P10620 155 aaKnown RBP10.08□□□□□ -0.8
USP39-206ENST00000448971 GYPEP15421 78 aa10.08□□□□□ -0.8
USP39-206ENST00000448971 MRPL23Q16540 153 aaKnown RBP10.08□□□□□ -0.8
USP39-206ENST00000448971 CFAP126Q5VTH2 177 aa10.08□□□□□ -0.8
USP39-206ENST00000448971 Q6ZR54 194 aa10.08□□□□□ -0.8
USP39-206ENST00000448971 SYT8Q8NBV8 401 aa10.08□□□□□ -0.8
USP39-206ENST00000448971 ZNRF2Q8NHG8 242 aa10.08□□□□□ -0.8
USP39-206ENST00000448971 MED9Q9NWA0 146 aa10.08□□□□□ -0.8
USP39-206ENST00000448971 ARMS2P0C7Q2 107 aa10.07□□□□□ -0.8
USP39-206ENST00000448971 GNG4P50150 75 aa10.07□□□□□ -0.8
USP39-206ENST00000448971 RPL19P84098 196 aaKnown RBP10.07□□□□□ -0.8
USP39-206ENST00000448971 ESRGQ1W209 222 aa10.07□□□□□ -0.8
USP39-206ENST00000448971 PTH2Q96A98 100 aa10.07□□□□□ -0.8
USP39-206ENST00000448971 MLST8Q9BVC4 326 aa10.07□□□□□ -0.8
USP39-206ENST00000448971 MRPS16Q9Y3D3 137 aaKnown RBP10.07□□□□□ -0.8
USP39-206ENST00000448971 PHLDA3Q9Y5J5 127 aa10.07□□□□□ -0.8
USP39-206ENST00000448971 LRP1BQ9NZR2 4599 aa10.06□□□□□ -0.8
USP39-206ENST00000448971 A8MWV9 139 aa10.06□□□□□ -0.8
USP39-206ENST00000448971 K7EQD1 137 aa10.06□□□□□ -0.8
USP39-206ENST00000448971 M0R381 172 aa10.06□□□□□ -0.8
USP39-206ENST00000448971 CIDEAO60543 219 aa10.06□□□□□ -0.8
USP39-206ENST00000448971 GATA1P15976 413 aaPredicted RBP10.06□□□□□ -0.8
USP39-206ENST00000448971 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
USP39-206ENST00000448971 NEGR1Q7Z3B1 354 aa10.06□□□□□ -0.8
USP39-206ENST00000448971 NACAE9PAV3 2078 aa10.06□□□□□ -0.8
USP39-206ENST00000448971 RAB19A4D1S5 217 aa10.05□□□□□ -0.8
USP39-206ENST00000448971 RHOHQ15669 191 aa10.05□□□□□ -0.8
USP39-206ENST00000448971 ZNF575Q86XF7 245 aa10.05□□□□□ -0.8
USP39-206ENST00000448971 ZFP82Q8N141 532 aa10.05□□□□□ -0.8
USP39-206ENST00000448971 UPK3BQ9BT76 320 aa10.05□□□□□ -0.8
USP39-206ENST00000448971 PARLQ9H300 379 aa10.05□□□□□ -0.8
USP39-206ENST00000448971 LOC100131303A0A0U1RQF7 123 aa10.04□□□□□ -0.8
USP39-206ENST00000448971 NBDYA0A0U1RRE5 68 aa10.04□□□□□ -0.8
USP39-206ENST00000448971 TOR2AQ5JU69 321 aa10.04□□□□□ -0.8
USP39-206ENST00000448971 SOHLH1Q5JUK2 328 aa10.04□□□□□ -0.8
USP39-206ENST00000448971 PIK3CD-AS1Q5SR53 167 aa10.04□□□□□ -0.8
USP39-206ENST00000448971 FAM74A4Q5TZK3 123 aa10.04□□□□□ -0.8
USP39-206ENST00000448971 DAZAP1Q96EP5 407 aaKnown RBP10.04□□□□□ -0.8
USP39-206ENST00000448971 SMIM12Q96EX1 92 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms