RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 Q6ZS92 163 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 TMEM141Q96I45 108 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 SNURFQ9Y675 71 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 PZPP20742 1482 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 STRCP1A6NGW2 1772 aa1.8□□□□□ -2.12
PMS1-216ENST00000447734 AKAP11Q9UKA4 1901 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 A0A0J9YY99 117 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 JMJD7-PLA2G4BH0Y9G9 81 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 MRPS14O60783 128 aaKnown RBP1.79□□□□□ -2.12
PMS1-216ENST00000447734 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 IFNA17P01571 189 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 IFITM1P13164 125 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 S100A7L2Q5SY68 101 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 C12orf73Q69YU5 71 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 C10orf105Q8TEF2 133 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 LINC00526Q96FQ7 95 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 TMEM14CQ9P0S9 112 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 VPS8Q8N3P4 1428 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 CUL7Q14999 1698 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 CASZ1Q86V15 1759 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 MYOFQ9NZM1 2061 aa1.79□□□□□ -2.12
PMS1-216ENST00000447734 CHD3Q12873 2000 aaKnown RBP1.78□□□□□ -2.12
PMS1-216ENST00000447734 ALPK3Q96L96 1907 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 LRP5O75197 1615 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 CNTLNQ9NXG0 1405 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 PIGBOS1A0A0B4J2F0 54 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 M0R143 59 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 TFF1P04155 84 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 GYPBP06028 91 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 KRTAP10-1P60331 282 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 SLC48A1Q6P1K1 146 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 ZNF625Q96I27 306 aaPredicted RBP1.78□□□□□ -2.12
PMS1-216ENST00000447734 LIMD2Q9BT23 127 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 WFDC10AQ9H1F0 79 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 MED9Q9NWA0 146 aa1.78□□□□□ -2.12
PMS1-216ENST00000447734 MRPL36Q9P0J6 103 aaKnown RBP1.78□□□□□ -2.12
PMS1-216ENST00000447734 UNC13CQ8NB66 2214 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 TRAV23DV6A0A075B6W5 121 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 IGLV3-32A0A0A0MS00 114 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 CXorf51AA0A1B0GTR3 108 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 OOSP1A8MZH6 123 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 M0R2N4 97 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 INE1O15225 51 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 SPINK8P0C7L1 97 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 NPC2P61916 151 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 UBE2G1P62253 170 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 DEFB103AP81534 67 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 TSKUQ8WUA8 353 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 ATG5Q9H1Y0 275 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 GBF1Q92538 1859 aa1.77□□□□□ -2.13
PMS1-216ENST00000447734 COL5A3P25940 1745 aaPredicted RBP1.77□□□□□ -2.13
PMS1-216ENST00000447734 SIP14410 1827 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 TRBV10-1A0A0K0K1A3 114 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 TCRBV3S1A0A5B6 114 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 NUPR2A6NF83 97 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 IGHV3-30P01768 117 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 IGHV3-30-5P0DP03 117 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 CBLN1P23435 193 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 PKIAP61925 76 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 SPRNQ5BIV9 151 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 C9orf116Q5BN46 136 aaPredicted RBP1.76□□□□□ -2.13
PMS1-216ENST00000447734 NCMAPQ5T1S8 102 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 LINC00322Q6ZN03 302 aaPredicted RBP1.76□□□□□ -2.13
PMS1-216ENST00000447734 DMAC1Q96GE9 116 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 QRICH2Q9H0J4 1663 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 MAPKBP1O60336 1514 aa1.76□□□□□ -2.13
PMS1-216ENST00000447734 CR1P17927 2039 aa1.75□□□□□ -2.13
PMS1-216ENST00000447734 FAM24AA6NFZ4 105 aa1.75□□□□□ -2.13
PMS1-216ENST00000447734 IGLV3-1P01715 115 aa1.75□□□□□ -2.13
PMS1-216ENST00000447734 PDE6GP18545 87 aa1.75□□□□□ -2.13
PMS1-216ENST00000447734 S100A10P60903 97 aa1.75□□□□□ -2.13
PMS1-216ENST00000447734 RBM3P98179 157 aaKnown RBP1.75□□□□□ -2.13
PMS1-216ENST00000447734 Q8N8P6 123 aa1.75□□□□□ -2.13
PMS1-216ENST00000447734 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
PMS1-216ENST00000447734 TNRC6AQ8NDV7 1962 aaKnown RBP1.75□□□□□ -2.13
PMS1-216ENST00000447734 DAPK1P53355 1430 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 PTPRDP23468 1912 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 NRKQ7Z2Y5 1582 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 LOC110117498A0A087WWA1 95 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 HCRTO43612 131 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 INSL4Q14641 139 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 NDUFA11Q86Y39 141 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 SPTSSBQ8NFR3 76 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 AQP10Q96PS8 301 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 ODF3Q96PU9 254 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 DSCR8Q96T75 97 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 LCE3DQ9BYE3 92 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 MRPL35Q9NZE8 188 aaKnown RBP1.74□□□□□ -2.13
PMS1-216ENST00000447734 ZFYVE16Q7Z3T8 1539 aa1.74□□□□□ -2.13
PMS1-216ENST00000447734 PLXNA2O75051 1894 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 MYO18AQ92614 2054 aaKnown RBP1.73□□□□□ -2.13
PMS1-216ENST00000447734 MCM3APO60318 1980 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 IGKV3-7A0A075B6H7 116 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 CCKP06307 115 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 KRTAP10-10P60014 251 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 SPATA45Q537H7 98 aa1.73□□□□□ -2.13
PMS1-216ENST00000447734 TTC9CQ8N5M4 171 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms