RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 LINC01545Q5VT33 79 aa14.52□□□□□ -0.08
FAM3A-215ENST00000447601 Q8N8P6 123 aa14.52□□□□□ -0.08
FAM3A-215ENST00000447601 TRAV26-2A0A0B4J265 109 aa14.52□□□□□ -0.09
FAM3A-215ENST00000447601 H0Y8G0 127 aa14.52□□□□□ -0.09
FAM3A-215ENST00000447601 MAJINQ3KP22 176 aa14.52□□□□□ -0.09
FAM3A-215ENST00000447601 MRPL52Q86TS9 123 aaKnown RBP14.52□□□□□ -0.09
FAM3A-215ENST00000447601 C16orf95Q9H693 158 aa14.52□□□□□ -0.09
FAM3A-215ENST00000447601 TMEM160Q9NX00 188 aa14.52□□□□□ -0.09
FAM3A-215ENST00000447601 CD7P09564 240 aa14.51□□□□□ -0.09
FAM3A-215ENST00000447601 FLNAP21333 2647 aaKnown RBP14.51□□□□□ -0.09
FAM3A-215ENST00000447601 SPINK13Q1W4C9 94 aa14.5□□□□□ -0.09
FAM3A-215ENST00000447601 TMEM61Q8N0U2 210 aa14.5□□□□□ -0.09
FAM3A-215ENST00000447601 ZNF418Q8TF45 676 aaPredicted RBP14.5□□□□□ -0.09
FAM3A-215ENST00000447601 HELZ2Q9BYK8 2649 aaKnown RBP14.5□□□□□ -0.09
FAM3A-215ENST00000447601 TRAV12-2A0A075B6T6 113 aa14.5□□□□□ -0.09
FAM3A-215ENST00000447601 SPRY2O43597 315 aa14.5□□□□□ -0.09
FAM3A-215ENST00000447601 AMTNQ6UX39 209 aa14.5□□□□□ -0.09
FAM3A-215ENST00000447601 C14orf178Q8N769 122 aaPredicted RBP14.5□□□□□ -0.09
FAM3A-215ENST00000447601 IGLV2-18A0A075B6J9 118 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 HSBP1L1C9JCN9 74 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 M0R143 59 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 IGLL1P15814 213 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 FCER1GP30273 86 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 FXYD7P58549 80 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 DEFB131AP59861 70 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 RAX2Q96IS3 184 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 TLN2Q9Y4G6 2542 aa14.49□□□□□ -0.09
FAM3A-215ENST00000447601 HLA-DRB4P13762 266 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 FHL3Q13643 280 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 DEFB114Q30KQ6 69 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 C2orf88Q9BSF0 95 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 ST20Q9HBF5 79 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 HLA-DRB4X5D2U9 266 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 IGHV1OR15-1A0A075B7D0 117 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 CD28P10747 220 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 LINC01006Q8NI28 216 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 IFI27L1Q96BM0 104 aa14.48□□□□□ -0.09
FAM3A-215ENST00000447601 UNC79Q9P2D8 2635 aa14.47□□□□□ -0.09
FAM3A-215ENST00000447601 A8MTW9 85 aa14.47□□□□□ -0.09
FAM3A-215ENST00000447601 MGPP08493 103 aa14.47□□□□□ -0.09
FAM3A-215ENST00000447601 MCRIP2Q9BUT9 160 aaKnown RBP14.47□□□□□ -0.09
FAM3A-215ENST00000447601 SNHG12Q9BXW3 62 aa14.47□□□□□ -0.09
FAM3A-215ENST00000447601 TSSC4Q9Y5U2 329 aaPredicted RBP14.47□□□□□ -0.09
FAM3A-215ENST00000447601 IGHV3-16A0A0C4DH30 117 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 A0A1W2PRX2 142 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 KNCNA6PVL3 124 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 CCL24O00175 119 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 EREGO14944 169 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 PPP1R17O96001 155 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 SMIM17P0DL12 118 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 HILS1P60008 231 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 LGALS9BQ3B8N2 356 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 LGALS9CQ6DKI2 356 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 HIST2H2BDQ6DRA6 164 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 C11orf44Q8N8P7 122 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 C9orf85Q96MD7 179 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 SPAG8Q99932 426 aaPredicted RBP14.46□□□□□ -0.09
FAM3A-215ENST00000447601 C20orf78Q9BR46 151 aa14.46□□□□□ -0.09
FAM3A-215ENST00000447601 Q6ZN92 141 aa14.45□□□□□ -0.1
FAM3A-215ENST00000447601 POM121L12Q8N7R1 296 aa14.45□□□□□ -0.1
FAM3A-215ENST00000447601 SONP18583 2426 aaKnown RBP14.45□□□□□ -0.1
FAM3A-215ENST00000447601 MYO9AB2RTY4 2548 aa14.45□□□□□ -0.1
FAM3A-215ENST00000447601 H3BMM0 161 aa14.45□□□□□ -0.1
FAM3A-215ENST00000447601 LAGE3Q14657 143 aa14.45□□□□□ -0.1
FAM3A-215ENST00000447601 RASL10AQ92737 203 aa14.45□□□□□ -0.1
FAM3A-215ENST00000447601 SMIM2Q9BVW6 85 aa14.45□□□□□ -0.1
FAM3A-215ENST00000447601 TRAV25A0A0B4J276 109 aa14.44□□□□□ -0.1
FAM3A-215ENST00000447601 hDV102S1A0JD36 115 aa14.44□□□□□ -0.1
FAM3A-215ENST00000447601 HNRNPA3P51991 378 aaKnown RBP14.44□□□□□ -0.1
FAM3A-215ENST00000447601 CD300EQ496F6 205 aaPredicted RBP14.44□□□□□ -0.1
FAM3A-215ENST00000447601 Q8N1Y9 231 aa14.44□□□□□ -0.1
FAM3A-215ENST00000447601 SYT8Q8NBV8 401 aa14.44□□□□□ -0.1
FAM3A-215ENST00000447601 TMEM158Q8WZ71 300 aa14.44□□□□□ -0.1
FAM3A-215ENST00000447601 CITED2Q99967 270 aaPredicted RBP14.44□□□□□ -0.1
FAM3A-215ENST00000447601 PMCHL2Q9BQD1 86 aa14.44□□□□□ -0.1
FAM3A-215ENST00000447601 SUMO2P61956 95 aaKnown RBP14.43□□□□□ -0.1
FAM3A-215ENST00000447601 MAP6D1Q9H9H5 199 aa14.43□□□□□ -0.1
FAM3A-215ENST00000447601 GOLT1BQ9Y3E0 138 aa14.43□□□□□ -0.1
FAM3A-215ENST00000447601 KIF25-AS1Q9Y6Z4 181 aa14.43□□□□□ -0.1
FAM3A-215ENST00000447601 TRGV11A0A075B6L2 103 aa14.43□□□□□ -0.1
FAM3A-215ENST00000447601 MDFICQ9P1T7 246 aa14.42□□□□□ -0.1
FAM3A-215ENST00000447601 K7EMI3 77 aa14.41□□□□□ -0.1
FAM3A-215ENST00000447601 C18orf15Q96N68 181 aa14.41□□□□□ -0.1
FAM3A-215ENST00000447601 JMJD8Q96S16 334 aa14.41□□□□□ -0.1
FAM3A-215ENST00000447601 TCAPO15273 167 aa14.41□□□□□ -0.1
FAM3A-215ENST00000447601 NDUFA7O95182 113 aa14.41□□□□□ -0.1
FAM3A-215ENST00000447601 LINC00315P59091 139 aa14.41□□□□□ -0.1
FAM3A-215ENST00000447601 RPL39LQ96EH5 51 aaKnown RBP14.41□□□□□ -0.1
FAM3A-215ENST00000447601 ATP5LO75964 103 aa14.4□□□□□ -0.1
FAM3A-215ENST00000447601 ORMDL2Q53FV1 153 aa14.4□□□□□ -0.1
FAM3A-215ENST00000447601 ZNF256Q9Y2P7 627 aaPredicted RBP14.4□□□□□ -0.1
FAM3A-215ENST00000447601 CBY3A6NI87 242 aa14.39□□□□□ -0.11
FAM3A-215ENST00000447601 SMR3AQ99954 134 aa14.39□□□□□ -0.11
FAM3A-215ENST00000447601 MRPS16Q9Y3D3 137 aaKnown RBP14.39□□□□□ -0.11
FAM3A-215ENST00000447601 RBMY1BA6NDE4 496 aaKnown RBP14.38□□□□□ -0.11
FAM3A-215ENST00000447601 RBMY1EA6NEQ0 496 aaKnown RBP14.38□□□□□ -0.11
FAM3A-215ENST00000447601 RBMY1DP0C7P1 496 aaKnown RBP14.38□□□□□ -0.11
FAM3A-215ENST00000447601 ZNF124Q15973 351 aa14.38□□□□□ -0.11
FAM3A-215ENST00000447601 JPT2Q9H910 190 aa14.38□□□□□ -0.11
FAM3A-215ENST00000447601 AKAP9Q99996 3911 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms