RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ICOSQ9Y6W8 199 aa10.26□□□□□ -0.77
HDAC4-204ENST00000446876 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
HDAC4-204ENST00000446876 S100A9P06702 114 aaKnown RBP10.25□□□□□ -0.77
HDAC4-204ENST00000446876 RPL35P42766 123 aaKnown RBP10.25□□□□□ -0.77
HDAC4-204ENST00000446876 FAM3BP58499 235 aaPredicted RBP10.25□□□□□ -0.77
HDAC4-204ENST00000446876 BAGE2Q86Y30 109 aa10.25□□□□□ -0.77
HDAC4-204ENST00000446876 C11orf52Q96A22 123 aa10.25□□□□□ -0.77
HDAC4-204ENST00000446876 LOC100131303A0A0U1RQF7 123 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 RS1O15537 224 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 BCL2P10415 239 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 RPL19P84098 196 aaKnown RBP10.24□□□□□ -0.77
HDAC4-204ENST00000446876 SLAQ13239 276 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 LINC01559Q495D7 138 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 CFAP126Q5VTH2 177 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 PRR27Q6MZM9 219 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 MLST8Q9BVC4 326 aa10.24□□□□□ -0.77
HDAC4-204ENST00000446876 IFNA1P01562 189 aa10.23□□□□□ -0.77
HDAC4-204ENST00000446876 ARMS2P0C7Q2 107 aa10.23□□□□□ -0.77
HDAC4-204ENST00000446876 GYPEP15421 78 aa10.23□□□□□ -0.77
HDAC4-204ENST00000446876 MEF2BQ02080 365 aaPredicted RBP10.23□□□□□ -0.77
HDAC4-204ENST00000446876 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
HDAC4-204ENST00000446876 DNAH17Q9UFH2 4485 aa10.23□□□□□ -0.77
HDAC4-204ENST00000446876 RAB19A4D1S5 217 aa10.22□□□□□ -0.77
HDAC4-204ENST00000446876 K7EQD1 137 aa10.22□□□□□ -0.77
HDAC4-204ENST00000446876 RTL8CO15255 209 aa10.22□□□□□ -0.77
HDAC4-204ENST00000446876 GATA1P15976 413 aaPredicted RBP10.22□□□□□ -0.77
HDAC4-204ENST00000446876 CENPWQ5EE01 88 aa10.22□□□□□ -0.77
HDAC4-204ENST00000446876 PTH2Q96A98 100 aa10.22□□□□□ -0.77
HDAC4-204ENST00000446876 JPT2Q9H910 190 aa10.22□□□□□ -0.77
HDAC4-204ENST00000446876 IL36BQ9NZH7 164 aa10.22□□□□□ -0.77
HDAC4-204ENST00000446876 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.77
HDAC4-204ENST00000446876 MRPL23Q16540 153 aaKnown RBP10.21□□□□□ -0.77
HDAC4-204ENST00000446876 DNLZQ5SXM8 178 aa10.21□□□□□ -0.77
HDAC4-204ENST00000446876 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
HDAC4-204ENST00000446876 PCNPQ8WW12 178 aaKnown RBP10.21□□□□□ -0.77
HDAC4-204ENST00000446876 TXNDC17Q9BRA2 123 aa10.21□□□□□ -0.77
HDAC4-204ENST00000446876 Q9H8V8 135 aa10.21□□□□□ -0.77
HDAC4-204ENST00000446876 FAT2Q9NYQ8 4349 aa10.21□□□□□ -0.78
HDAC4-204ENST00000446876 IGLV2-8P01709 118 aa10.2□□□□□ -0.78
HDAC4-204ENST00000446876 SRIP30626 198 aa10.2□□□□□ -0.78
HDAC4-204ENST00000446876 UPK3BQ9BT76 320 aa10.2□□□□□ -0.78
HDAC4-204ENST00000446876 SAMD10Q9BYL1 202 aa10.2□□□□□ -0.78
HDAC4-204ENST00000446876 KRTAP1-5Q9BYS1 174 aa10.2□□□□□ -0.78
HDAC4-204ENST00000446876 PARLQ9H300 379 aa10.2□□□□□ -0.78
HDAC4-204ENST00000446876 MED9Q9NWA0 146 aa10.2□□□□□ -0.78
HDAC4-204ENST00000446876 VAX2Q9UIW0 290 aa10.2□□□□□ -0.78
HDAC4-204ENST00000446876 TRBV20OR9-2A0A075B6H5 130 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 M0R381 172 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 PDE6DO43924 150 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 MGST1P10620 155 aaKnown RBP10.19□□□□□ -0.78
HDAC4-204ENST00000446876 BLOC1S1P78537 153 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 LYPD5Q6UWN5 251 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 Q6ZSN1 163 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 NEGR1Q7Z3B1 354 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 SLC25A29Q8N8R3 303 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 SCRT2Q9NQ03 307 aa10.19□□□□□ -0.78
HDAC4-204ENST00000446876 NXPH4O95158 308 aa10.18□□□□□ -0.78
HDAC4-204ENST00000446876 GNG4P50150 75 aa10.18□□□□□ -0.78
HDAC4-204ENST00000446876 C1orf134Q5TEV5 83 aa10.18□□□□□ -0.78
HDAC4-204ENST00000446876 SYT8Q8NBV8 401 aa10.18□□□□□ -0.78
HDAC4-204ENST00000446876 PHLDA3Q9Y5J5 127 aa10.18□□□□□ -0.78
HDAC4-204ENST00000446876 HECTD4Q9Y4D8 3996 aa10.17□□□□□ -0.78
HDAC4-204ENST00000446876 MUC21A0A0G2JKD1 596 aa10.17□□□□□ -0.78
HDAC4-204ENST00000446876 MUC21A0A140T8X8 626 aa10.17□□□□□ -0.78
HDAC4-204ENST00000446876 A8MWV9 139 aa10.17□□□□□ -0.78
HDAC4-204ENST00000446876 A0A087WWL8 130 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 RBFOX3A6NFN3 312 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 PRSS29PA6NIE9 313 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 RHOHQ15669 191 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 PIK3CD-AS1Q5SR53 167 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 UFSP1Q6NVU6 142 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 LINC00336Q6ZUF6 198 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 OR10AG1Q8NH19 301 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 LYPD6BQ8NI32 183 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
HDAC4-204ENST00000446876 SIVA1O15304 175 aa10.15□□□□□ -0.78
HDAC4-204ENST00000446876 CIDEAO60543 219 aa10.15□□□□□ -0.78
HDAC4-204ENST00000446876 GZMBP10144 247 aa10.15□□□□□ -0.78
HDAC4-204ENST00000446876 TAGLN2P37802 199 aaKnown RBP10.15□□□□□ -0.78
HDAC4-204ENST00000446876 ZFP2Q6ZN57 461 aa10.15□□□□□ -0.78
HDAC4-204ENST00000446876 WFDC10BQ8IUB3 73 aa10.15□□□□□ -0.78
HDAC4-204ENST00000446876 ZFP82Q8N141 532 aa10.15□□□□□ -0.78
HDAC4-204ENST00000446876 C6orf223Q8N319 242 aa10.15□□□□□ -0.78
HDAC4-204ENST00000446876 C14orf178Q8N769 122 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-204ENST00000446876 Q9UF83 564 aa10.15□□□□□ -0.78
HDAC4-204ENST00000446876 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
HDAC4-204ENST00000446876 CXCL1P09341 107 aa10.14□□□□□ -0.79
HDAC4-204ENST00000446876 MED14OSP0DP75 135 aa10.14□□□□□ -0.79
HDAC4-204ENST00000446876 SSTP61278 116 aa10.14□□□□□ -0.79
HDAC4-204ENST00000446876 TOR2AQ5JU69 321 aa10.14□□□□□ -0.79
HDAC4-204ENST00000446876 SFRP2Q96HF1 295 aa10.14□□□□□ -0.79
HDAC4-204ENST00000446876 A0A1B0GVY2 172 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 GAGE12JA6NER3 117 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 SNAI2O43623 268 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 CRYGDP07320 174 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 GAGE1Q13065 139 aa10.13□□□□□ -0.79
HDAC4-204ENST00000446876 GAGE4Q13068 117 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms