RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 VSIG2Q96IQ7 327 aa16.69■□□□□ 0.26
C9orf3-207ENST00000445181 DNAH6Q9C0G6 4158 aa16.68■□□□□ 0.26
C9orf3-207ENST00000445181 H3BVH4 76 aa16.68■□□□□ 0.26
C9orf3-207ENST00000445181 GNG4P50150 75 aa16.68■□□□□ 0.26
C9orf3-207ENST00000445181 CCL18P55774 89 aa16.68■□□□□ 0.26
C9orf3-207ENST00000445181 DNAH10Q8IVF4 4471 aa16.67■□□□□ 0.26
C9orf3-207ENST00000445181 RAB19A4D1S5 217 aa16.67■□□□□ 0.26
C9orf3-207ENST00000445181 RBFOX3A6NFN3 312 aa16.67■□□□□ 0.26
C9orf3-207ENST00000445181 PGPEP1LA6NFU8 196 aa16.67■□□□□ 0.26
C9orf3-207ENST00000445181 MGST1P10620 155 aaKnown RBP16.67■□□□□ 0.26
C9orf3-207ENST00000445181 CRYBA4P53673 196 aa16.67■□□□□ 0.26
C9orf3-207ENST00000445181 ZNF506Q5JVG8 444 aa16.67■□□□□ 0.26
C9orf3-207ENST00000445181 LYPD6BQ8NI32 183 aa16.67■□□□□ 0.26
C9orf3-207ENST00000445181 IL36BQ9NZH7 164 aa16.67■□□□□ 0.26
C9orf3-207ENST00000445181 PTH2Q96A98 100 aa16.66■□□□□ 0.26
C9orf3-207ENST00000445181 ARMS2P0C7Q2 107 aa16.65■□□□□ 0.26
C9orf3-207ENST00000445181 ICOSQ9Y6W8 199 aa16.65■□□□□ 0.26
C9orf3-207ENST00000445181 FRAS1Q86XX4 4008 aa16.65■□□□□ 0.26
C9orf3-207ENST00000445181 A0A096LPF7 62 aa16.64■□□□□ 0.25
C9orf3-207ENST00000445181 DNLZQ5SXM8 178 aa16.64■□□□□ 0.25
C9orf3-207ENST00000445181 CFAP126Q5VTH2 177 aa16.64■□□□□ 0.25
C9orf3-207ENST00000445181 SYT8Q8NBV8 401 aa16.64■□□□□ 0.25
C9orf3-207ENST00000445181 NACAE9PAV3 2078 aa16.63■□□□□ 0.25
C9orf3-207ENST00000445181 RS1O15537 224 aa16.63■□□□□ 0.25
C9orf3-207ENST00000445181 FAM3BP58499 235 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-207ENST00000445181 RPL19P84098 196 aaKnown RBP16.63■□□□□ 0.25
C9orf3-207ENST00000445181 PCNPQ8WW12 178 aaKnown RBP16.63■□□□□ 0.25
C9orf3-207ENST00000445181 DAZAP1Q96EP5 407 aaKnown RBP16.63■□□□□ 0.25
C9orf3-207ENST00000445181 EIF5A2Q9GZV4 153 aaKnown RBP16.63■□□□□ 0.25
C9orf3-207ENST00000445181 PHLDA3Q9Y5J5 127 aa16.63■□□□□ 0.25
C9orf3-207ENST00000445181 IGLV2-18A0A075B6J9 118 aa16.62■□□□□ 0.25
C9orf3-207ENST00000445181 TOR2AQ5JU69 321 aa16.62■□□□□ 0.25
C9orf3-207ENST00000445181 TEX261Q6UWH6 196 aa16.62■□□□□ 0.25
C9orf3-207ENST00000445181 SMIM12Q96EX1 92 aa16.62■□□□□ 0.25
C9orf3-207ENST00000445181 LINC00588Q9Y4M8 146 aa16.62■□□□□ 0.25
C9orf3-207ENST00000445181 IGHV3-73A0A0B4J1V6 119 aa16.61■□□□□ 0.25
C9orf3-207ENST00000445181 CIDEAO60543 219 aa16.61■□□□□ 0.25
C9orf3-207ENST00000445181 IGLV2-8P01709 118 aa16.61■□□□□ 0.25
C9orf3-207ENST00000445181 A8MWV9 139 aa16.6■□□□□ 0.25
C9orf3-207ENST00000445181 M0R2N4 97 aa16.6■□□□□ 0.25
C9orf3-207ENST00000445181 CEBPGP53567 150 aa16.6■□□□□ 0.25
C9orf3-207ENST00000445181 MRPL23Q16540 153 aaKnown RBP16.6■□□□□ 0.25
C9orf3-207ENST00000445181 PIK3CD-AS1Q5SR53 167 aa16.6■□□□□ 0.25
C9orf3-207ENST00000445181 ZNF575Q86XF7 245 aa16.6■□□□□ 0.25
C9orf3-207ENST00000445181 BIN3Q9NQY0 253 aa16.6■□□□□ 0.25
C9orf3-207ENST00000445181 TRBV20OR9-2A0A075B6H5 130 aa16.59■□□□□ 0.25
C9orf3-207ENST00000445181 TMEM250H0YL14 139 aa16.59■□□□□ 0.25
C9orf3-207ENST00000445181 M0R381 172 aa16.59■□□□□ 0.25
C9orf3-207ENST00000445181 GYPEP15421 78 aa16.59■□□□□ 0.25
C9orf3-207ENST00000445181 GATA1P15976 413 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-207ENST00000445181 ESRGQ1W209 222 aa16.59■□□□□ 0.25
C9orf3-207ENST00000445181 DMRTA1Q5VZB9 504 aa16.59■□□□□ 0.25
C9orf3-207ENST00000445181 SRIP30626 198 aa16.58■□□□□ 0.24
C9orf3-207ENST00000445181 FAM210AQ96ND0 272 aa16.58■□□□□ 0.24
C9orf3-207ENST00000445181 SCRT2Q9NQ03 307 aa16.58■□□□□ 0.24
C9orf3-207ENST00000445181 K7EQD1 137 aa16.57■□□□□ 0.24
C9orf3-207ENST00000445181 CXCL1P09341 107 aa16.57■□□□□ 0.24
C9orf3-207ENST00000445181 MED14OSP0DP75 135 aa16.57■□□□□ 0.24
C9orf3-207ENST00000445181 ZFP82Q8N141 532 aa16.57■□□□□ 0.24
C9orf3-207ENST00000445181 PARLQ9H300 379 aa16.57■□□□□ 0.24
C9orf3-207ENST00000445181 LINC00336Q6ZUF6 198 aa16.56■□□□□ 0.24
C9orf3-207ENST00000445181 JPT2Q9H910 190 aa16.56■□□□□ 0.24
C9orf3-207ENST00000445181 P01737 135 aa16.55■□□□□ 0.24
C9orf3-207ENST00000445181 ZFP2Q6ZN57 461 aa16.55■□□□□ 0.24
C9orf3-207ENST00000445181 NEGR1Q7Z3B1 354 aa16.55■□□□□ 0.24
C9orf3-207ENST00000445181 SLC25A29Q8N8R3 303 aa16.55■□□□□ 0.24
C9orf3-207ENST00000445181 OR2D3Q8NGH3 330 aa16.55■□□□□ 0.24
C9orf3-207ENST00000445181 ZNRF2Q8NHG8 242 aa16.55■□□□□ 0.24
C9orf3-207ENST00000445181 PRADC1Q9BSG0 188 aa16.55■□□□□ 0.24
C9orf3-207ENST00000445181 C19orf71A6NCJ1 209 aa16.54■□□□□ 0.24
C9orf3-207ENST00000445181 RPS20P60866 119 aaKnown RBP16.54■□□□□ 0.24
C9orf3-207ENST00000445181 RHOHQ15669 191 aa16.54■□□□□ 0.24
C9orf3-207ENST00000445181 MRPS16Q9Y3D3 137 aaKnown RBP16.54■□□□□ 0.24
C9orf3-207ENST00000445181 LOC100131303A0A0U1RQF7 123 aa16.53■□□□□ 0.24
C9orf3-207ENST00000445181 TRBV6-4A0A1B0GX49 114 aa16.53■□□□□ 0.24
C9orf3-207ENST00000445181 FAM74A4Q5TZK3 123 aa16.53■□□□□ 0.24
C9orf3-207ENST00000445181 SAMD10Q9BYL1 202 aa16.53■□□□□ 0.24
C9orf3-207ENST00000445181 XKRY2A2RUG3 117 aa16.52■□□□□ 0.24
C9orf3-207ENST00000445181 RHODO00212 210 aa16.52■□□□□ 0.24
C9orf3-207ENST00000445181 SPANXN1Q5VSR9 72 aa16.52■□□□□ 0.24
C9orf3-207ENST00000445181 OR10AG1Q8NH19 301 aa16.52■□□□□ 0.24
C9orf3-207ENST00000445181 OCC1Q8TAD7 63 aa16.52■□□□□ 0.24
C9orf3-207ENST00000445181 SFRP2Q96HF1 295 aa16.52■□□□□ 0.24
C9orf3-207ENST00000445181 TPPP3Q9BW30 176 aa16.52■□□□□ 0.24
C9orf3-207ENST00000445181 Q9H8V8 135 aa16.52■□□□□ 0.24
C9orf3-207ENST00000445181 A0A087WWL8 130 aa16.51■□□□□ 0.23
C9orf3-207ENST00000445181 MUC21A0A0G2JKD1 596 aa16.51■□□□□ 0.23
C9orf3-207ENST00000445181 MUC21A0A140T8X8 626 aa16.51■□□□□ 0.23
C9orf3-207ENST00000445181 GZMBP10144 247 aa16.51■□□□□ 0.23
C9orf3-207ENST00000445181 SSTP61278 116 aa16.51■□□□□ 0.23
C9orf3-207ENST00000445181 LYPD5Q6UWN5 251 aa16.51■□□□□ 0.23
C9orf3-207ENST00000445181 UPK3BQ9BT76 320 aa16.51■□□□□ 0.23
C9orf3-207ENST00000445181 K7EN84 100 aa16.5■□□□□ 0.23
C9orf3-207ENST00000445181 SNAI2O43623 268 aa16.5■□□□□ 0.23
C9orf3-207ENST00000445181 NDUFS6O75380 124 aaKnown RBP16.5■□□□□ 0.23
C9orf3-207ENST00000445181 OR5AL1P0C617 328 aa16.5■□□□□ 0.23
C9orf3-207ENST00000445181 SH2D6Q7Z4S9 175 aa16.5■□□□□ 0.23
C9orf3-207ENST00000445181 SMIM7Q9BQ49 75 aa16.5■□□□□ 0.23
C9orf3-207ENST00000445181 SSBP4Q9BWG4 385 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-207ENST00000445181 DNAH2Q9P225 4427 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms