RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 LINC00322Q6ZN03 302 aaPredicted RBP4.01□□□□□ -1.77
SCN11A-202ENST00000444237 RPL36ALQ969Q0 106 aaKnown RBP4.01□□□□□ -1.77
SCN11A-202ENST00000444237 AJUBAQ96IF1 538 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 GTF3C1Q12789 2109 aa4.01□□□□□ -1.77
SCN11A-202ENST00000444237 ABCA7Q8IZY2 2146 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 PAX8Q06710 450 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 PHF3Q92576 2039 aaKnown RBP4□□□□□ -1.77
SCN11A-202ENST00000444237 IGKV1OR2-108A0A075B7D4 117 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 KLK5Q9Y337 293 aaPredicted RBP4□□□□□ -1.77
SCN11A-202ENST00000444237 SNRNP200O75643 2136 aaKnown RBP4□□□□□ -1.77
SCN11A-202ENST00000444237 WIPF1O43516 503 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 FUSP35637 526 aaKnown RBP eCLIP4□□□□□ -1.77
SCN11A-202ENST00000444237 KRTAP27-1Q3LI81 207 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 TMEM61Q8N0U2 210 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 GAFA1Q96PS6 74 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 Q9H8V8 135 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 KIAA2026Q5HYC2 2103 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 NXPH4O95158 308 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-8P0DP01 117 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 ZNF491Q8N8L2 437 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C1orf159Q96HA4 380 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C15orf32Q32M92 178 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C6orf226Q5I0X4 101 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 WDR86Q86TI4 376 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C17orf77Q96MU5 243 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
SCN11A-202ENST00000444237 ZNF134P52741 427 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 C17orf58Q2M2W7 97 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 HELZP42694 1942 aaKnown RBP3.99□□□□□ -1.77
SCN11A-202ENST00000444237 A0A0J9YXV3 536 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 A0A0J9YXY3 114 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 C17orf100A8MU93 164 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 H7C423 109 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 PDE6GP18545 87 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 BLCAPP62952 87 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 KIR2DL5BQ8NHK3 375 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 RPL39LQ96EH5 51 aaKnown RBP3.99□□□□□ -1.77
SCN11A-202ENST00000444237 PRO0461Q9UI25 63 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 HHLA3Q9XRX5 114 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 LINC00311Q8N616 119 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 ZMAT4Q9H898 229 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 DENND4CQ5VZ89 1909 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 C2orf16Q68DN1 1984 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 MED12Q93074 2177 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 RTTNQ86VV8 2226 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-58A0A0C4DH39 117 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 B3GALT5-AS1P59052 145 aa3.99□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1OR15-1A0A075B7D0 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MED14OSP0DP75 135 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 WFDC9Q8NEX5 89 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 SPTSSBQ8NFR3 76 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 TMEM263Q8WUH6 116 aaKnown RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 LINC01587Q99440 93 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 WI2-2373I1.2A0A1W2PRP0 233 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MBD3L4A6NDZ8 208 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MBD3L3A6NE82 208 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MBD3L5A6NJ08 208 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 HOXD3P31249 432 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 PLA2G2CQ5R387 149 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 FDCSPQ8NFU4 85 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 DPH3Q96FX2 82 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 KIF26AQ9ULI4 1882 aaPredicted RBP3.98□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-18A0A0C4DH31 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 ARHGAP21Q5T5U3 1957 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV3OR16-12A0A075B7B8 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 TMEM256-PLSCR3K7ERE1 68 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV1-46P01743 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV3-30-3P0DP02 117 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 MYCNOSP40205 109 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 COL4A3Q01955 1670 aa3.98□□□□□ -1.77
SCN11A-202ENST00000444237 LECT2O14960 151 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 FOXE3Q13461 319 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 CRIP3Q6Q6R5 217 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 Q6ZPA2 131 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 FGF23Q9GZV9 251 aaPredicted RBP3.97□□□□□ -1.77
SCN11A-202ENST00000444237 PROK2Q9HC23 129 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 PYGO1Q9Y3Y4 419 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 PLXNB3Q9ULL4 1909 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 BUB1B-PAK6H3BSN5 160 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 HIST2H2BCQ6DN03 193 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 HIST2H2BDQ6DRA6 164 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 SND1-IT1Q9HBX3 110 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 RNF138Q8WVD3 245 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 IGHV3-73A0A0B4J1V6 119 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 SUMO4Q6EEV6 95 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 ENHOQ6UWT2 76 aa3.97□□□□□ -1.77
SCN11A-202ENST00000444237 MRPL36Q9P0J6 103 aaKnown RBP3.97□□□□□ -1.77
SCN11A-202ENST00000444237 TRAV7A0A075B6U4 112 aa3.96□□□□□ -1.77
SCN11A-202ENST00000444237 TIRAPP58753 221 aa3.96□□□□□ -1.77
SCN11A-202ENST00000444237 ODF3Q96PU9 254 aa3.96□□□□□ -1.77
SCN11A-202ENST00000444237 PTPRSQ13332 1948 aa3.96□□□□□ -1.77
SCN11A-202ENST00000444237 TMEM223A0PJW6 202 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 RPL39P62891 51 aaKnown RBP3.96□□□□□ -1.78
SCN11A-202ENST00000444237 PRB3Q04118 309 aaPredicted RBP3.96□□□□□ -1.78
SCN11A-202ENST00000444237 Q8N7P7 452 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 MED12LQ86YW9 2145 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 ANAPC1Q9H1A4 1944 aa3.96□□□□□ -1.78
SCN11A-202ENST00000444237 ARHGEF17Q96PE2 2063 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms