RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 LYPD5Q6UWN5 251 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 MBD3L1Q8WWY6 194 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 TXNDC17Q9BRA2 123 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 ZFP30Q9Y2G7 519 aa14.45□□□□□ -0.1
CDKN3-204ENST00000442975 SH2D1AO60880 128 aa14.44□□□□□ -0.1
CDKN3-204ENST00000442975 H2AFB1P0C5Y9 115 aa14.44□□□□□ -0.1
CDKN3-204ENST00000442975 GATA1P15976 413 aaPredicted RBP14.44□□□□□ -0.1
CDKN3-204ENST00000442975 FAM162BQ5T6X4 162 aa14.44□□□□□ -0.1
CDKN3-204ENST00000442975 PGPEP1LA6NFU8 196 aa14.43□□□□□ -0.1
CDKN3-204ENST00000442975 H3BVH4 76 aa14.43□□□□□ -0.1
CDKN3-204ENST00000442975 RS1O15537 224 aa14.43□□□□□ -0.1
CDKN3-204ENST00000442975 SCO2A0A1W2PP80 73 aa14.42□□□□□ -0.1
CDKN3-204ENST00000442975 LTAP01374 205 aa14.42□□□□□ -0.1
CDKN3-204ENST00000442975 CRIP1P50238 77 aa14.42□□□□□ -0.1
CDKN3-204ENST00000442975 ZNF575Q86XF7 245 aa14.42□□□□□ -0.1
CDKN3-204ENST00000442975 TCTE3Q8IZS6 198 aa14.42□□□□□ -0.1
CDKN3-204ENST00000442975 TMSB15BA0A087X1C1 80 aa14.41□□□□□ -0.1
CDKN3-204ENST00000442975 LINC00315P59091 139 aa14.41□□□□□ -0.1
CDKN3-204ENST00000442975 LGALSLQ3ZCW2 172 aaPredicted RBP14.41□□□□□ -0.1
CDKN3-204ENST00000442975 SLC25A29Q8N8R3 303 aa14.41□□□□□ -0.1
CDKN3-204ENST00000442975 TRBV6-1A0A0K0K1D8 114 aa14.4□□□□□ -0.1
CDKN3-204ENST00000442975 GRIFINA4D1Z8 144 aa14.4□□□□□ -0.1
CDKN3-204ENST00000442975 RHOHQ15669 191 aa14.4□□□□□ -0.1
CDKN3-204ENST00000442975 WFDC10BQ8IUB3 73 aa14.4□□□□□ -0.1
CDKN3-204ENST00000442975 PRADC1Q9BSG0 188 aa14.4□□□□□ -0.1
CDKN3-204ENST00000442975 hCG_2014768A0A024R1R8 64 aa14.39□□□□□ -0.11
CDKN3-204ENST00000442975 KRBOX1C9JBD0 128 aa14.39□□□□□ -0.11
CDKN3-204ENST00000442975 EIF5AL1Q6IS14 154 aaKnown RBP14.39□□□□□ -0.11
CDKN3-204ENST00000442975 COX8CQ7Z4L0 72 aa14.39□□□□□ -0.11
CDKN3-204ENST00000442975 PTH2Q96A98 100 aa14.39□□□□□ -0.11
CDKN3-204ENST00000442975 IL36BQ9NZH7 164 aa14.39□□□□□ -0.11
CDKN3-204ENST00000442975 GNG13Q9P2W3 67 aa14.39□□□□□ -0.11
CDKN3-204ENST00000442975 CIDEAO60543 219 aa14.38□□□□□ -0.11
CDKN3-204ENST00000442975 SH2D6Q7Z4S9 175 aa14.38□□□□□ -0.11
CDKN3-204ENST00000442975 LY96Q9Y6Y9 160 aa14.38□□□□□ -0.11
CDKN3-204ENST00000442975 TRBV6-4A0A1B0GX49 114 aa14.37□□□□□ -0.11
CDKN3-204ENST00000442975 A8MWV9 139 aa14.37□□□□□ -0.11
CDKN3-204ENST00000442975 ARMS2P0C7Q2 107 aa14.37□□□□□ -0.11
CDKN3-204ENST00000442975 MGST1P10620 155 aaKnown RBP14.37□□□□□ -0.11
CDKN3-204ENST00000442975 ZNF674Q2M3X9 581 aa14.37□□□□□ -0.11
CDKN3-204ENST00000442975 Q6ZNX1 250 aa14.37□□□□□ -0.11
CDKN3-204ENST00000442975 SYT8Q8NBV8 401 aa14.37□□□□□ -0.11
CDKN3-204ENST00000442975 PARLQ9H300 379 aa14.37□□□□□ -0.11
CDKN3-204ENST00000442975 S100A9P06702 114 aaKnown RBP14.36□□□□□ -0.11
CDKN3-204ENST00000442975 RAB5CP51148 216 aa14.36□□□□□ -0.11
CDKN3-204ENST00000442975 LINC01559Q495D7 138 aa14.36□□□□□ -0.11
CDKN3-204ENST00000442975 MANBALQ9NQG1 85 aa14.36□□□□□ -0.11
CDKN3-204ENST00000442975 C16orf90A8MZG2 172 aa14.35□□□□□ -0.11
CDKN3-204ENST00000442975 C1QBP02746 253 aa14.35□□□□□ -0.11
CDKN3-204ENST00000442975 BTF3P20290 206 aaKnown RBP14.35□□□□□ -0.11
CDKN3-204ENST00000442975 CCL20P78556 96 aa14.35□□□□□ -0.11
CDKN3-204ENST00000442975 AKAP14Q86UN6 197 aa14.35□□□□□ -0.11
CDKN3-204ENST00000442975 BAGE2Q86Y30 109 aa14.35□□□□□ -0.11
CDKN3-204ENST00000442975 PHLDA3Q9Y5J5 127 aa14.35□□□□□ -0.11
CDKN3-204ENST00000442975 TRAV9-2A0A087WT02 112 aa14.34□□□□□ -0.11
CDKN3-204ENST00000442975 TEX46H3BTG2 121 aa14.34□□□□□ -0.11
CDKN3-204ENST00000442975 M0R381 172 aa14.34□□□□□ -0.11
CDKN3-204ENST00000442975 MED14OSP0DP75 135 aa14.34□□□□□ -0.11
CDKN3-204ENST00000442975 EVI2AP22794 236 aa14.34□□□□□ -0.11
CDKN3-204ENST00000442975 DMRTA1Q5VZB9 504 aa14.34□□□□□ -0.11
CDKN3-204ENST00000442975 PRR27Q6MZM9 219 aa14.34□□□□□ -0.11
CDKN3-204ENST00000442975 JPT2Q9H910 190 aa14.34□□□□□ -0.11
CDKN3-204ENST00000442975 PIK3CD-AS1Q5SR53 167 aa14.33□□□□□ -0.12
CDKN3-204ENST00000442975 FAM74A4Q5TZK3 123 aa14.33□□□□□ -0.12
CDKN3-204ENST00000442975 ZFP2Q6ZN57 461 aa14.33□□□□□ -0.12
CDKN3-204ENST00000442975 SLC51BQ86UW2 128 aa14.33□□□□□ -0.12
CDKN3-204ENST00000442975 SAMD10Q9BYL1 202 aa14.33□□□□□ -0.12
CDKN3-204ENST00000442975 LRP1BQ9NZR2 4599 aa14.33□□□□□ -0.12
CDKN3-204ENST00000442975 RPL35P42766 123 aaKnown RBP14.32□□□□□ -0.12
CDKN3-204ENST00000442975 SULT1A2P50226 295 aa14.32□□□□□ -0.12
CDKN3-204ENST00000442975 TIRAPP58753 221 aa14.32□□□□□ -0.12
CDKN3-204ENST00000442975 RPL19P84098 196 aaKnown RBP14.32□□□□□ -0.12
CDKN3-204ENST00000442975 OR10J3Q5JRS4 329 aa14.32□□□□□ -0.12
CDKN3-204ENST00000442975 DNLZQ5SXM8 178 aa14.32□□□□□ -0.12
CDKN3-204ENST00000442975 Q6ZSN1 163 aa14.32□□□□□ -0.12
CDKN3-204ENST00000442975 SPATA12Q7Z6I5 190 aa14.32□□□□□ -0.12
CDKN3-204ENST00000442975 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
CDKN3-204ENST00000442975 TRAV1-1A0A0B4J248 108 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 GAGE12JA6NER3 117 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 RHODO00212 210 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 CRYGDP07320 174 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 DNAH10OSP0CZ25 163 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 GAGE1Q13065 139 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 GAGE4Q13068 117 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 GAGE5Q13069 117 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 GAGE13Q4V321 117 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 ZFP82Q8N141 532 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 DERL1Q9BUN8 251 aa14.31□□□□□ -0.12
CDKN3-204ENST00000442975 A0A087WWL8 130 aa14.3□□□□□ -0.12
CDKN3-204ENST00000442975 TRAV8-6A0A0B4J262 113 aa14.3□□□□□ -0.12
CDKN3-204ENST00000442975 Q6ZRN7 208 aaPredicted RBP14.3□□□□□ -0.12
CDKN3-204ENST00000442975 SCRT2Q9NQ03 307 aa14.3□□□□□ -0.12
CDKN3-204ENST00000442975 IGHV3-38A0A0C4DH36 116 aa14.29□□□□□ -0.12
CDKN3-204ENST00000442975 CENPWQ5EE01 88 aa14.29□□□□□ -0.12
CDKN3-204ENST00000442975 UFSP1Q6NVU6 142 aa14.29□□□□□ -0.12
CDKN3-204ENST00000442975 NFE4Q86UQ8 179 aa14.29□□□□□ -0.12
CDKN3-204ENST00000442975 C14orf178Q8N769 122 aaPredicted RBP14.29□□□□□ -0.12
CDKN3-204ENST00000442975 ATP6V0E2Q8NHE4 81 aa14.29□□□□□ -0.12
CDKN3-204ENST00000442975 C11orf52Q96A22 123 aa14.29□□□□□ -0.12
CDKN3-204ENST00000442975 MLST8Q9BVC4 326 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms