RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 C6orf223Q8N319 242 aa16.54■□□□□ 0.24
CPNE1-217ENST00000439669 GNG13Q9P2W3 67 aa16.54■□□□□ 0.24
CPNE1-217ENST00000439669 RS1O15537 224 aa16.53■□□□□ 0.24
CPNE1-217ENST00000439669 S100A9P06702 114 aaKnown RBP16.53■□□□□ 0.24
CPNE1-217ENST00000439669 SULT1A2P50226 295 aa16.53■□□□□ 0.24
CPNE1-217ENST00000439669 CFAP126Q5VTH2 177 aa16.53■□□□□ 0.24
CPNE1-217ENST00000439669 NHLRC2Q8NBF2 726 aa16.53■□□□□ 0.24
CPNE1-217ENST00000439669 MANBALQ9NQG1 85 aa16.53■□□□□ 0.24
CPNE1-217ENST00000439669 IGHV3-73A0A0B4J1V6 119 aa16.52■□□□□ 0.24
CPNE1-217ENST00000439669 TEX46H3BTG2 121 aa16.52■□□□□ 0.24
CPNE1-217ENST00000439669 NXPH4O95158 308 aa16.52■□□□□ 0.24
CPNE1-217ENST00000439669 GATA1P15976 413 aaPredicted RBP16.52■□□□□ 0.24
CPNE1-217ENST00000439669 CCL20P78556 96 aa16.52■□□□□ 0.24
CPNE1-217ENST00000439669 LYPD5Q6UWN5 251 aa16.52■□□□□ 0.24
CPNE1-217ENST00000439669 PTH2Q96A98 100 aa16.52■□□□□ 0.24
CPNE1-217ENST00000439669 TRAV1-1A0A0B4J248 108 aa16.51■□□□□ 0.23
CPNE1-217ENST00000439669 LOC100131303A0A0U1RQF7 123 aa16.51■□□□□ 0.23
CPNE1-217ENST00000439669 A0A1B0GVY2 172 aa16.51■□□□□ 0.23
CPNE1-217ENST00000439669 KRBOX1C9JBD0 128 aa16.51■□□□□ 0.23
CPNE1-217ENST00000439669 H3BVH4 76 aa16.51■□□□□ 0.23
CPNE1-217ENST00000439669 ZNF674Q2M3X9 581 aa16.51■□□□□ 0.23
CPNE1-217ENST00000439669 TXNDC17Q9BRA2 123 aa16.51■□□□□ 0.23
CPNE1-217ENST00000439669 TMSB15BA0A087X1C1 80 aa16.5■□□□□ 0.23
CPNE1-217ENST00000439669 GRIFINA4D1Z8 144 aa16.5■□□□□ 0.23
CPNE1-217ENST00000439669 CIDEAO60543 219 aa16.5■□□□□ 0.23
CPNE1-217ENST00000439669 KRTAP1-5Q9BYS1 174 aa16.5■□□□□ 0.23
CPNE1-217ENST00000439669 IL36BQ9NZH7 164 aa16.5■□□□□ 0.23
CPNE1-217ENST00000439669 SIVA1O15304 175 aa16.49■□□□□ 0.23
CPNE1-217ENST00000439669 BAGE2Q86Y30 109 aa16.49■□□□□ 0.23
CPNE1-217ENST00000439669 A0A1W2PPQ1 181 aa16.48■□□□□ 0.23
CPNE1-217ENST00000439669 LINC01559Q495D7 138 aa16.48■□□□□ 0.23
CPNE1-217ENST00000439669 C9orf62Q8N4C0 152 aa16.48■□□□□ 0.23
CPNE1-217ENST00000439669 PRADC1Q9BSG0 188 aa16.48■□□□□ 0.23
CPNE1-217ENST00000439669 ARMS2P0C7Q2 107 aa16.47■□□□□ 0.23
CPNE1-217ENST00000439669 RHOHQ15669 191 aa16.47■□□□□ 0.23
CPNE1-217ENST00000439669 SLC25A29Q8N8R3 303 aa16.47■□□□□ 0.23
CPNE1-217ENST00000439669 SYT8Q8NBV8 401 aa16.47■□□□□ 0.23
CPNE1-217ENST00000439669 A8MWV9 139 aa16.46■□□□□ 0.23
CPNE1-217ENST00000439669 DNLZQ5SXM8 178 aa16.46■□□□□ 0.23
CPNE1-217ENST00000439669 PARLQ9H300 379 aa16.46■□□□□ 0.23
CPNE1-217ENST00000439669 DNAH2Q9P225 4427 aa16.46■□□□□ 0.22
CPNE1-217ENST00000439669 TRBV6-4A0A1B0GX49 114 aa16.45■□□□□ 0.22
CPNE1-217ENST00000439669 MGST1P10620 155 aaKnown RBP16.45■□□□□ 0.22
CPNE1-217ENST00000439669 PIK3CD-AS1Q5SR53 167 aa16.45■□□□□ 0.22
CPNE1-217ENST00000439669 SH2D6Q7Z4S9 175 aa16.45■□□□□ 0.22
CPNE1-217ENST00000439669 C11orf52Q96A22 123 aa16.45■□□□□ 0.22
CPNE1-217ENST00000439669 IFNA1P01562 189 aa16.44■□□□□ 0.22
CPNE1-217ENST00000439669 RPL35P42766 123 aaKnown RBP16.44■□□□□ 0.22
CPNE1-217ENST00000439669 TNP2Q05952 138 aa16.44■□□□□ 0.22
CPNE1-217ENST00000439669 PHLDA3Q9Y5J5 127 aa16.44■□□□□ 0.22
CPNE1-217ENST00000439669 DMRTA1Q5VZB9 504 aa16.43■□□□□ 0.22
CPNE1-217ENST00000439669 PRR27Q6MZM9 219 aa16.43■□□□□ 0.22
CPNE1-217ENST00000439669 DERL1Q9BUN8 251 aa16.43■□□□□ 0.22
CPNE1-217ENST00000439669 MLST8Q9BVC4 326 aa16.43■□□□□ 0.22
CPNE1-217ENST00000439669 JPT2Q9H910 190 aa16.43■□□□□ 0.22
CPNE1-217ENST00000439669 RPL19P84098 196 aaKnown RBP16.42■□□□□ 0.22
CPNE1-217ENST00000439669 ZFP2Q6ZN57 461 aa16.42■□□□□ 0.22
CPNE1-217ENST00000439669 DNAH17Q9UFH2 4485 aa16.42■□□□□ 0.22
CPNE1-217ENST00000439669 FAT2Q9NYQ8 4349 aa16.41■□□□□ 0.22
CPNE1-217ENST00000439669 M0R381 172 aa16.41■□□□□ 0.22
CPNE1-217ENST00000439669 MEF2BQ02080 365 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-217ENST00000439669 WFDC10BQ8IUB3 73 aa16.41■□□□□ 0.22
CPNE1-217ENST00000439669 HECTD4Q9Y4D8 3996 aa16.41■□□□□ 0.22
CPNE1-217ENST00000439669 BCL2P10415 239 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 LINC00315P59091 139 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 CENPWQ5EE01 88 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 Q6ZSN1 163 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 ZNF575Q86XF7 245 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 ZFP82Q8N141 532 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 SAMD10Q9BYL1 202 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 SCRT2Q9NQ03 307 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 LY96Q9Y6Y9 160 aa16.4■□□□□ 0.22
CPNE1-217ENST00000439669 BTF3P20290 206 aaKnown RBP16.39■□□□□ 0.21
CPNE1-217ENST00000439669 FAM74A4Q5TZK3 123 aa16.39■□□□□ 0.21
CPNE1-217ENST00000439669 A0A1B0GVG6 124 aa16.38■□□□□ 0.21
CPNE1-217ENST00000439669 RHODO00212 210 aa16.38■□□□□ 0.21
CPNE1-217ENST00000439669 PDE6DO43924 150 aa16.38■□□□□ 0.21
CPNE1-217ENST00000439669 ALKAL2Q6UX46 152 aa16.38■□□□□ 0.21
CPNE1-217ENST00000439669 TRAV9-2A0A087WT02 112 aa16.37■□□□□ 0.21
CPNE1-217ENST00000439669 MED14OSP0DP75 135 aa16.37■□□□□ 0.21
CPNE1-217ENST00000439669 TIRAPP58753 221 aa16.37■□□□□ 0.21
CPNE1-217ENST00000439669 VAX2Q9UIW0 290 aa16.37■□□□□ 0.21
CPNE1-217ENST00000439669 A0A087WWL8 130 aa16.36■□□□□ 0.21
CPNE1-217ENST00000439669 CXCL1P09341 107 aa16.36■□□□□ 0.21
CPNE1-217ENST00000439669 EVI2AP22794 236 aa16.36■□□□□ 0.21
CPNE1-217ENST00000439669 UFSP1Q6NVU6 142 aa16.36■□□□□ 0.21
CPNE1-217ENST00000439669 SFRP2Q96HF1 295 aa16.36■□□□□ 0.21
CPNE1-217ENST00000439669 MED9Q9NWA0 146 aa16.36■□□□□ 0.21
CPNE1-217ENST00000439669 RAB19A4D1S5 217 aa16.35■□□□□ 0.21
CPNE1-217ENST00000439669 GAGE12JA6NER3 117 aa16.35■□□□□ 0.21
CPNE1-217ENST00000439669 GNG4P50150 75 aa16.35■□□□□ 0.21
CPNE1-217ENST00000439669 NKX2-5P52952 324 aaPredicted RBP16.35■□□□□ 0.21
CPNE1-217ENST00000439669 GAGE1Q13065 139 aa16.35■□□□□ 0.21
CPNE1-217ENST00000439669 GAGE4Q13068 117 aa16.35■□□□□ 0.21
CPNE1-217ENST00000439669 GAGE5Q13069 117 aa16.35■□□□□ 0.21
CPNE1-217ENST00000439669 GAGE13Q4V321 117 aa16.35■□□□□ 0.21
CPNE1-217ENST00000439669 ATP6V0E2Q8NHE4 81 aa16.35■□□□□ 0.21
CPNE1-217ENST00000439669 DNAH10OSP0CZ25 163 aa16.34■□□□□ 0.21
CPNE1-217ENST00000439669 TAGLN2P37802 199 aaKnown RBP16.34■□□□□ 0.21
CPNE1-217ENST00000439669 C14orf178Q8N769 122 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms