RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 UNQ9165/PRO28630Q6UXU0 137 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 Q8N8P6 123 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 APRG1Q8IVJ8 170 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 ZNF503Q96F45 646 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
TCOF1-205ENST00000439160 IGHV3-38A0A0C4DH36 116 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 RHODO00212 210 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 IGHV4OR15-8A0A075B7B6 117 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 A0A087WW49 117 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 AZU1P20160 251 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 NPC2P61916 151 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 C11orf71Q6IPW1 123 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 IGF2BP2-AS1Q96M15 143 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 SPXQ9BT56 116 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 C16orf54Q6UWD8 224 aa9.51□□□□□ -0.89
TCOF1-205ENST00000439160 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
TCOF1-205ENST00000439160 TSSC4Q9Y5U2 329 aaPredicted RBP9.51□□□□□ -0.89
TCOF1-205ENST00000439160 TRBV7-9A0A0J9YWB2 115 aa9.5□□□□□ -0.89
TCOF1-205ENST00000439160 GATA1P15976 413 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-205ENST00000439160 FOXI2Q6ZQN5 318 aa9.5□□□□□ -0.89
TCOF1-205ENST00000439160 SEC11AP67812 179 aa9.5□□□□□ -0.89
TCOF1-205ENST00000439160 SMIM2Q9BVW6 85 aa9.5□□□□□ -0.89
TCOF1-205ENST00000439160 MRPS16Q9Y3D3 137 aaKnown RBP9.5□□□□□ -0.89
TCOF1-205ENST00000439160 A8MWV9 139 aa9.5□□□□□ -0.89
TCOF1-205ENST00000439160 CRPP02741 224 aa9.5□□□□□ -0.89
TCOF1-205ENST00000439160 HIST2H2BCQ6DN03 193 aa9.5□□□□□ -0.89
TCOF1-205ENST00000439160 WIPF2Q8TF74 440 aaPredicted RBP9.5□□□□□ -0.89
TCOF1-205ENST00000439160 MRPL53Q96EL3 112 aaKnown RBP9.5□□□□□ -0.89
TCOF1-205ENST00000439160 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
TCOF1-205ENST00000439160 ZNRF2Q8NHG8 242 aa9.49□□□□□ -0.89
TCOF1-205ENST00000439160 EML5Q05BV3 1969 aa9.49□□□□□ -0.89
TCOF1-205ENST00000439160 A6NDX4 124 aa9.49□□□□□ -0.89
TCOF1-205ENST00000439160 LENEPQ9Y5L5 61 aa9.49□□□□□ -0.89
TCOF1-205ENST00000439160 EYSQ5T1H1 3165 aa9.49□□□□□ -0.89
TCOF1-205ENST00000439160 GTSF1Q8WW33 167 aa9.48□□□□□ -0.89
TCOF1-205ENST00000439160 ACANP16112 2415 aa9.48□□□□□ -0.89
TCOF1-205ENST00000439160 TNFRSF13BO14836 293 aaPredicted RBP9.48□□□□□ -0.89
TCOF1-205ENST00000439160 FSTL3O95633 263 aa9.48□□□□□ -0.89
TCOF1-205ENST00000439160 LINC00158P58513 81 aa9.48□□□□□ -0.89
TCOF1-205ENST00000439160 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
TCOF1-205ENST00000439160 ZNF843Q8N446 348 aa9.48□□□□□ -0.89
TCOF1-205ENST00000439160 KLF12Q9Y4X4 402 aa9.48□□□□□ -0.89
TCOF1-205ENST00000439160 WFDC11Q8NEX6 87 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 ZNF479Q96JC4 524 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 CCDC140Q96MF4 163 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 KIR2DL5BA0A0G2JN68 375 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 KIR2DL5BA0A0G2JPC4 375 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 MRPL52Q86TS9 123 aaKnown RBP9.47□□□□□ -0.89
TCOF1-205ENST00000439160 KIR2DL5AQ8N109 375 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 I3L3M4 83 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 LOXL1Q08397 574 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-205ENST00000439160 SZT2Q5T011 3432 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 F5H768 121 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 PLEKHB2Q96CS7 222 aa9.47□□□□□ -0.89
TCOF1-205ENST00000439160 C2orf70A6NJV1 201 aa9.46□□□□□ -0.89
TCOF1-205ENST00000439160 KIR3DS1Q14943 382 aa9.46□□□□□ -0.89
TCOF1-205ENST00000439160 CHAC1Q9BUX1 264 aa9.46□□□□□ -0.89
TCOF1-205ENST00000439160 MRPL35Q9NZE8 188 aaKnown RBP9.46□□□□□ -0.89
TCOF1-205ENST00000439160 LY6LH3BQJ8 138 aa9.46□□□□□ -0.89
TCOF1-205ENST00000439160 ZNF625Q96I27 306 aaPredicted RBP9.46□□□□□ -0.89
TCOF1-205ENST00000439160 TMEM238C9JI98 176 aa9.46□□□□□ -0.9
TCOF1-205ENST00000439160 MORN3Q6PF18 240 aaPredicted RBP9.46□□□□□ -0.9
TCOF1-205ENST00000439160 SPAG8Q99932 426 aaPredicted RBP9.46□□□□□ -0.9
TCOF1-205ENST00000439160 TIMM21Q9BVV7 248 aa9.46□□□□□ -0.9
TCOF1-205ENST00000439160 CD5LO43866 347 aa9.45□□□□□ -0.9
TCOF1-205ENST00000439160 DAD1P61803 113 aa9.45□□□□□ -0.9
TCOF1-205ENST00000439160 CRYGBP07316 175 aa9.45□□□□□ -0.9
TCOF1-205ENST00000439160 ESDP10768 282 aa9.45□□□□□ -0.9
TCOF1-205ENST00000439160 GPHB5Q86YW7 130 aa9.45□□□□□ -0.9
TCOF1-205ENST00000439160 CKS1BP61024 79 aa9.45□□□□□ -0.9
TCOF1-205ENST00000439160 ZNF48Q96MX3 618 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-205ENST00000439160 COL5A1P20908 1838 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-205ENST00000439160 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
TCOF1-205ENST00000439160 NOP10Q9NPE3 64 aaKnown RBP9.44□□□□□ -0.9
TCOF1-205ENST00000439160 PMVKQ15126 192 aa9.44□□□□□ -0.9
TCOF1-205ENST00000439160 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
TCOF1-205ENST00000439160 U3KQE9 123 aa9.44□□□□□ -0.9
TCOF1-205ENST00000439160 PRIMA1Q86XR5 153 aa9.44□□□□□ -0.9
TCOF1-205ENST00000439160 K7EMT4 169 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 M0R2P5 195 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 RASL10AQ92737 203 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 DKK2Q9UBU2 259 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 DSCAML1Q8TD84 2053 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 A0A096LPF7 62 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 RNASE13Q5GAN3 156 aaKnown RBP9.43□□□□□ -0.9
TCOF1-205ENST00000439160 TMEM61Q8N0U2 210 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 RPL39LQ96EH5 51 aaKnown RBP9.43□□□□□ -0.9
TCOF1-205ENST00000439160 ZNF747Q9BV97 191 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 C20orf78Q9BR46 151 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
TCOF1-205ENST00000439160 IGHV4-31P0DP07 118 aa9.42□□□□□ -0.9
TCOF1-205ENST00000439160 HLA-DRB4P13762 266 aa9.42□□□□□ -0.9
TCOF1-205ENST00000439160 PAX2Q02962 417 aa9.42□□□□□ -0.9
TCOF1-205ENST00000439160 EBI3Q14213 229 aa9.42□□□□□ -0.9
TCOF1-205ENST00000439160 LINC00322Q6ZN03 302 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-205ENST00000439160 LINC00173Q6ZV60 143 aa9.42□□□□□ -0.9
TCOF1-205ENST00000439160 CITED2Q99967 270 aaPredicted RBP9.42□□□□□ -0.9
TCOF1-205ENST00000439160 HLA-DRB4X5D2U9 266 aa9.42□□□□□ -0.9
TCOF1-205ENST00000439160 LGALS9BQ3B8N2 356 aa9.42□□□□□ -0.9
TCOF1-205ENST00000439160 OCIAD2Q56VL3 154 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms