RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 ZFAND2AQ8N6M9 145 aa5.43□□□□□ -1.54
COL28A1-202ENST00000430711 C5orf56Q8N8D9 126 aa5.43□□□□□ -1.54
COL28A1-202ENST00000430711 OR1N2Q8NGR9 330 aa5.43□□□□□ -1.54
COL28A1-202ENST00000430711 RASL10AQ92737 203 aa5.43□□□□□ -1.54
COL28A1-202ENST00000430711 NHP2Q9NX24 153 aaKnown RBP5.43□□□□□ -1.54
COL28A1-202ENST00000430711 SPCS1Q9Y6A9 102 aa5.43□□□□□ -1.54
COL28A1-202ENST00000430711 IGHV4-38-2P0DP08 117 aa5.42□□□□□ -1.54
COL28A1-202ENST00000430711 HIST2H2BDQ6DRA6 164 aa5.42□□□□□ -1.54
COL28A1-202ENST00000430711 C14orf178Q8N769 122 aaPredicted RBP5.42□□□□□ -1.54
COL28A1-202ENST00000430711 Q8N8P6 123 aa5.42□□□□□ -1.54
COL28A1-202ENST00000430711 DPF1Q92782 380 aa5.42□□□□□ -1.54
COL28A1-202ENST00000430711 TNP2Q05952 138 aa5.42□□□□□ -1.54
COL28A1-202ENST00000430711 SFTA2Q6UW10 78 aa5.42□□□□□ -1.54
COL28A1-202ENST00000430711 ITLN2Q8WWU7 325 aaPredicted RBP5.42□□□□□ -1.54
COL28A1-202ENST00000430711 NPFFR1Q9GZQ6 430 aa5.42□□□□□ -1.54
COL28A1-202ENST00000430711 U3KQE9 123 aa5.42□□□□□ -1.54
COL28A1-202ENST00000430711 TEX48A0A1B0GUV7 120 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 INSL3P51460 131 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 BLCAPP62952 87 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 C19orf54Q5BKX5 351 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 CCDC144NLQ6NUI1 221 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 OR9G4Q8NGQ1 327 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 PLEKHB2Q96CS7 222 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 ITPR2Q14571 2701 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 NF1P21359 2839 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.41□□□□□ -1.54
COL28A1-202ENST00000430711 SOCS3O14543 225 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 NPFFO15130 113 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 UBE2E1P51965 193 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 RPS20P60866 119 aaKnown RBP5.41□□□□□ -1.54
COL28A1-202ENST00000430711 WFDC2Q14508 124 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 ANXA2RQ3ZCQ2 193 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 TMEM78Q5T7P6 136 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 SAMD5Q5TGI4 173 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 MINOS1Q5TGZ0 78 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 C16orf92Q96LL3 132 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 CSTL1Q9H114 145 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 MINOS1-NBL1R4GNA1 71 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 F8P00451 2351 aa5.41□□□□□ -1.54
COL28A1-202ENST00000430711 DPM2O94777 84 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 TSHBP01222 138 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 IGHV4-39P01824 125 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 SPANXN1Q5VSR9 72 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 C9orf47Q6ZRZ4 202 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 SH2D6Q7Z4S9 175 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 KLHL30-AS1Q8NEE0 82 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 OR4X2Q8NGF9 303 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 NRGNQ92686 78 aa5.4□□□□□ -1.54
COL28A1-202ENST00000430711 IGHV4-61A0A0C4DH41 118 aa5.4□□□□□ -1.55
COL28A1-202ENST00000430711 A6NDN8 102 aa5.4□□□□□ -1.55
COL28A1-202ENST00000430711 G3V4G9 280 aa5.4□□□□□ -1.55
COL28A1-202ENST00000430711 RNASE3P12724 160 aaKnown RBP5.4□□□□□ -1.55
COL28A1-202ENST00000430711 RNASE4P34096 147 aaKnown RBP5.4□□□□□ -1.55
COL28A1-202ENST00000430711 LAGE3Q14657 143 aa5.4□□□□□ -1.55
COL28A1-202ENST00000430711 METTL26Q96S19 204 aa5.4□□□□□ -1.55
COL28A1-202ENST00000430711 NXT2Q9NPJ8 142 aaKnown RBP5.4□□□□□ -1.55
COL28A1-202ENST00000430711 TRAV41A0A0B4J266 112 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 RBAKDNA6NC62 111 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 H3BMG7 143 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 DUSP14O95147 198 aaKnown RBP5.39□□□□□ -1.55
COL28A1-202ENST00000430711 PRM2P04554 102 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 CRYGDP07320 174 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 MGPP08493 103 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
COL28A1-202ENST00000430711 ARL3P36405 182 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 RPL39P62891 51 aaKnown RBP5.39□□□□□ -1.55
COL28A1-202ENST00000430711 SRSF2Q01130 221 aaKnown RBP5.39□□□□□ -1.55
COL28A1-202ENST00000430711 C1orf122Q6ZSJ8 110 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 CEND1Q8N111 149 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 SMIM2Q9BVW6 85 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 TRBV7-3A0A075B6L6 115 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 A0A087WWL8 130 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 A0A087WX48 190 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 SIVA1O15304 175 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 LINC00315P59091 139 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 KLK9Q2XQG4 91 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 EEF1AKMT3Q96AZ1 226 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
COL28A1-202ENST00000430711 SLC50A1Q9BRV3 221 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 KLK9Q9UKQ9 250 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 CYSLTR1Q9Y271 337 aa5.39□□□□□ -1.55
COL28A1-202ENST00000430711 IGLL5B9A064 214 aa5.38□□□□□ -1.55
COL28A1-202ENST00000430711 SMIM13P0DJ93 91 aa5.38□□□□□ -1.55
COL28A1-202ENST00000430711 RPL11P62913 178 aaKnown RBP5.38□□□□□ -1.55
COL28A1-202ENST00000430711 ATP5G2Q06055 141 aa5.38□□□□□ -1.55
COL28A1-202ENST00000430711 MORN3Q6PF18 240 aaPredicted RBP5.38□□□□□ -1.55
COL28A1-202ENST00000430711 BAALCQ8WXS3 180 aa5.38□□□□□ -1.55
COL28A1-202ENST00000430711 AP1S3Q96PC3 154 aa5.38□□□□□ -1.55
COL28A1-202ENST00000430711 IGHV4-4A0A075B6R2 117 aa5.37□□□□□ -1.55
COL28A1-202ENST00000430711 OOSP1A8MZH6 123 aa5.37□□□□□ -1.55
COL28A1-202ENST00000430711 IGKV3-20P01619 116 aa5.37□□□□□ -1.55
COL28A1-202ENST00000430711 LGALS1P09382 135 aaKnown RBP5.37□□□□□ -1.55
COL28A1-202ENST00000430711 RPL24P83731 157 aaKnown RBP5.37□□□□□ -1.55
COL28A1-202ENST00000430711 KLRB1Q12918 225 aa5.37□□□□□ -1.55
COL28A1-202ENST00000430711 COTL1Q14019 142 aa5.37□□□□□ -1.55
COL28A1-202ENST00000430711 C12orf74Q32Q52 190 aa5.37□□□□□ -1.55
COL28A1-202ENST00000430711 NEXN-AS1Q8NBZ9 246 aa5.37□□□□□ -1.55
COL28A1-202ENST00000430711 TM2D2Q9BX73 214 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms