RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 SFTA3P0C7M3 94 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 SLAQ13239 276 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 FHL2Q14192 279 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 POM121L12Q8N7R1 296 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 OR4C5Q8NGB2 326 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 FAM210AQ96ND0 272 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 KMT2AQ03164 3969 aa17.56■□□□□ 0.4
HERPUD2-205ENST00000427455 DNAH6Q9C0G6 4158 aa17.55■□□□□ 0.4
HERPUD2-205ENST00000427455 GRIFINA4D1Z8 144 aa17.55■□□□□ 0.4
HERPUD2-205ENST00000427455 MGST1P10620 155 aaKnown RBP17.55■□□□□ 0.4
HERPUD2-205ENST00000427455 VSIG2Q96IQ7 327 aa17.55■□□□□ 0.4
HERPUD2-205ENST00000427455 EIF5A2Q9GZV4 153 aaKnown RBP17.55■□□□□ 0.4
HERPUD2-205ENST00000427455 PRO0255Q9UI72 69 aa17.55■□□□□ 0.4
HERPUD2-205ENST00000427455 TRGV4A0A0C4DH28 118 aa17.54■□□□□ 0.4
HERPUD2-205ENST00000427455 PGPEP1LA6NFU8 196 aa17.54■□□□□ 0.4
HERPUD2-205ENST00000427455 CXCL1P09341 107 aa17.54■□□□□ 0.4
HERPUD2-205ENST00000427455 ARMS2P0C7Q2 107 aa17.54■□□□□ 0.4
HERPUD2-205ENST00000427455 PIK3CD-AS1Q5SR53 167 aa17.54■□□□□ 0.4
HERPUD2-205ENST00000427455 ZNF575Q86XF7 245 aa17.54■□□□□ 0.4
HERPUD2-205ENST00000427455 UBE2DNLQ8IWF7 75 aa17.54■□□□□ 0.4
HERPUD2-205ENST00000427455 NDUFS6O75380 124 aaKnown RBP17.53■□□□□ 0.4
HERPUD2-205ENST00000427455 RNF212Q495C1 297 aa17.53■□□□□ 0.4
HERPUD2-205ENST00000427455 PARLQ9H300 379 aa17.53■□□□□ 0.4
HERPUD2-205ENST00000427455 HHLA3Q9XRX5 114 aa17.53■□□□□ 0.4
HERPUD2-205ENST00000427455 PAX4O43316 350 aa17.52■□□□□ 0.4
HERPUD2-205ENST00000427455 CRYBA4P53673 196 aa17.52■□□□□ 0.4
HERPUD2-205ENST00000427455 RPL19P84098 196 aaKnown RBP17.52■□□□□ 0.4
HERPUD2-205ENST00000427455 PCNPQ8WW12 178 aaKnown RBP17.52■□□□□ 0.4
HERPUD2-205ENST00000427455 BIN3Q9NQY0 253 aa17.52■□□□□ 0.4
HERPUD2-205ENST00000427455 RS1O15537 224 aa17.51■□□□□ 0.39
HERPUD2-205ENST00000427455 MED14OSP0DP75 135 aa17.51■□□□□ 0.39
HERPUD2-205ENST00000427455 CFAP126Q5VTH2 177 aa17.51■□□□□ 0.39
HERPUD2-205ENST00000427455 SYT8Q8NBV8 401 aa17.51■□□□□ 0.39
HERPUD2-205ENST00000427455 SCRT2Q9NQ03 307 aa17.51■□□□□ 0.39
HERPUD2-205ENST00000427455 CIDEAO60543 219 aa17.5■□□□□ 0.39
HERPUD2-205ENST00000427455 DAZAP1Q96EP5 407 aaKnown RBP17.5■□□□□ 0.39
HERPUD2-205ENST00000427455 PHLDA3Q9Y5J5 127 aa17.5■□□□□ 0.39
HERPUD2-205ENST00000427455 NACAE9PAV3 2078 aa17.49■□□□□ 0.39
HERPUD2-205ENST00000427455 C19orf71A6NCJ1 209 aa17.49■□□□□ 0.39
HERPUD2-205ENST00000427455 A8MWV9 139 aa17.48■□□□□ 0.39
HERPUD2-205ENST00000427455 CEBPGP53567 150 aa17.48■□□□□ 0.39
HERPUD2-205ENST00000427455 CCL18P55774 89 aa17.48■□□□□ 0.39
HERPUD2-205ENST00000427455 ICOSQ9Y6W8 199 aa17.48■□□□□ 0.39
HERPUD2-205ENST00000427455 A0A096LPF7 62 aa17.47■□□□□ 0.39
HERPUD2-205ENST00000427455 FAM3BP58499 235 aaPredicted RBP17.47■□□□□ 0.39
HERPUD2-205ENST00000427455 DMRTA1Q5VZB9 504 aa17.47■□□□□ 0.39
HERPUD2-205ENST00000427455 GATA1P15976 413 aaPredicted RBP17.46■□□□□ 0.39
HERPUD2-205ENST00000427455 ZFP82Q8N141 532 aa17.46■□□□□ 0.39
HERPUD2-205ENST00000427455 P01737 135 aa17.45■□□□□ 0.38
HERPUD2-205ENST00000427455 M0R381 172 aa17.44■□□□□ 0.38
HERPUD2-205ENST00000427455 SNAI2O43623 268 aa17.44■□□□□ 0.38
HERPUD2-205ENST00000427455 SRP19P09132 144 aaKnown RBP17.44■□□□□ 0.38
HERPUD2-205ENST00000427455 RPS20P60866 119 aaKnown RBP17.44■□□□□ 0.38
HERPUD2-205ENST00000427455 ZFP2Q6ZN57 461 aa17.44■□□□□ 0.38
HERPUD2-205ENST00000427455 OR2D3Q8NGH3 330 aa17.44■□□□□ 0.38
HERPUD2-205ENST00000427455 OCC1Q8TAD7 63 aa17.44■□□□□ 0.38
HERPUD2-205ENST00000427455 K7EN84 100 aa17.43■□□□□ 0.38
HERPUD2-205ENST00000427455 OR5AL1P0C617 328 aa17.43■□□□□ 0.38
HERPUD2-205ENST00000427455 MRPL23Q16540 153 aaKnown RBP17.43■□□□□ 0.38
HERPUD2-205ENST00000427455 SMIM7Q9BQ49 75 aa17.43■□□□□ 0.38
HERPUD2-205ENST00000427455 SSBP4Q9BWG4 385 aaPredicted RBP17.43■□□□□ 0.38
HERPUD2-205ENST00000427455 LINC00588Q9Y4M8 146 aa17.43■□□□□ 0.38
HERPUD2-205ENST00000427455 IGHV3-73A0A0B4J1V6 119 aa17.42■□□□□ 0.38
HERPUD2-205ENST00000427455 XKRY2A2RUG3 117 aa17.42■□□□□ 0.38
HERPUD2-205ENST00000427455 NXPH4O95158 308 aa17.42■□□□□ 0.38
HERPUD2-205ENST00000427455 GYPEP15421 78 aa17.42■□□□□ 0.38
HERPUD2-205ENST00000427455 OR10AG1Q8NH19 301 aa17.42■□□□□ 0.38
HERPUD2-205ENST00000427455 TRBV6-4A0A1B0GX49 114 aa17.41■□□□□ 0.38
HERPUD2-205ENST00000427455 K7EQD1 137 aa17.41■□□□□ 0.38
HERPUD2-205ENST00000427455 RHODO00212 210 aa17.41■□□□□ 0.38
HERPUD2-205ENST00000427455 RHOHQ15669 191 aa17.41■□□□□ 0.38
HERPUD2-205ENST00000427455 JPT2Q9H910 190 aa17.41■□□□□ 0.38
HERPUD2-205ENST00000427455 LY96Q9Y6Y9 160 aa17.41■□□□□ 0.38
HERPUD2-205ENST00000427455 SRIP30626 198 aa17.4■□□□□ 0.38
HERPUD2-205ENST00000427455 ESRGQ1W209 222 aa17.4■□□□□ 0.38
HERPUD2-205ENST00000427455 UFSP1Q6NVU6 142 aa17.4■□□□□ 0.38
HERPUD2-205ENST00000427455 SLC25A29Q8N8R3 303 aa17.4■□□□□ 0.38
HERPUD2-205ENST00000427455 NUDT10Q8NFP7 164 aa17.4■□□□□ 0.38
HERPUD2-205ENST00000427455 NUDT11Q96G61 164 aa17.4■□□□□ 0.38
HERPUD2-205ENST00000427455 SFRP2Q96HF1 295 aa17.4■□□□□ 0.38
HERPUD2-205ENST00000427455 ZNF727A8MUV8 499 aa17.39■□□□□ 0.37
HERPUD2-205ENST00000427455 IGLC6P0CF74 106 aa17.39■□□□□ 0.37
HERPUD2-205ENST00000427455 GZMBP10144 247 aa17.39■□□□□ 0.37
HERPUD2-205ENST00000427455 PEA15Q15121 130 aa17.39■□□□□ 0.37
HERPUD2-205ENST00000427455 PRADC1Q9BSG0 188 aa17.39■□□□□ 0.37
HERPUD2-205ENST00000427455 SAMD10Q9BYL1 202 aa17.39■□□□□ 0.37
HERPUD2-205ENST00000427455 RNASE7Q9H1E1 156 aaKnown RBP17.39■□□□□ 0.37
HERPUD2-205ENST00000427455 SMDT1Q9H4I9 107 aa17.39■□□□□ 0.37
HERPUD2-205ENST00000427455 RAB14P61106 215 aa17.38■□□□□ 0.37
HERPUD2-205ENST00000427455 SPANXN1Q5VSR9 72 aa17.38■□□□□ 0.37
HERPUD2-205ENST00000427455 NEGR1Q7Z3B1 354 aa17.38■□□□□ 0.37
HERPUD2-205ENST00000427455 FER1L6-AS1Q8NA97 138 aa17.38■□□□□ 0.37
HERPUD2-205ENST00000427455 ZNRF2Q8NHG8 242 aa17.38■□□□□ 0.37
HERPUD2-205ENST00000427455 RPP21Q9H633 154 aaKnown RBP17.38■□□□□ 0.37
HERPUD2-205ENST00000427455 MRPS16Q9Y3D3 137 aaKnown RBP17.38■□□□□ 0.37
HERPUD2-205ENST00000427455 FAM74A4Q5TZK3 123 aa17.37■□□□□ 0.37
HERPUD2-205ENST00000427455 UPK3BQ9BT76 320 aa17.37■□□□□ 0.37
HERPUD2-205ENST00000427455 TPPP3Q9BW30 176 aa17.37■□□□□ 0.37
HERPUD2-205ENST00000427455 A0A087WWL8 130 aa17.36■□□□□ 0.37
HERPUD2-205ENST00000427455 LOC100131303A0A0U1RQF7 123 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms