RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CENPWQ5EE01 88 aa5.24□□□□□ -1.57
LINC01049-201ENST00000426840 FAM162BQ5T6X4 162 aa5.24□□□□□ -1.57
LINC01049-201ENST00000426840 Q6ZTI0 123 aa5.24□□□□□ -1.57
LINC01049-201ENST00000426840 SDF2L1Q9HCN8 221 aa5.24□□□□□ -1.57
LINC01049-201ENST00000426840 NAGKQ9UJ70 344 aa5.24□□□□□ -1.57
LINC01049-201ENST00000426840 MUC4Q99102 2169 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
LINC01049-201ENST00000426840 TRAV10A0A0B4J240 114 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 GAGE12BA1L429 117 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 C19orf71A6NCJ1 209 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 PGPEP1LA6NFU8 196 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 KRBOX1C9JBD0 128 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 GAGE7O76087 117 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 ORM1P02763 201 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 GAGE12FP0CL80 117 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 GAGE12GP0CL81 117 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 GAGE12IP0CL82 117 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 DEFB130BP0DP73 79 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 DEFB130AP0DP74 79 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 RNASE3P12724 160 aaKnown RBP5.23□□□□□ -1.57
LINC01049-201ENST00000426840 DAD1P61803 113 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 ZNF415Q09FC8 603 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 CLLU1Q5K131 121 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 DNLZQ5SXM8 178 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 OCC1Q8TAD7 63 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 SMIM12Q96EX1 92 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 SPXQ9BT56 116 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 PARLQ9H300 379 aa5.23□□□□□ -1.57
LINC01049-201ENST00000426840 DEFB131BA0A096LNP1 70 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 GRIFINA4D1Z8 144 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 B4DEV8 164 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 C9JCJ5 164 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 M0R036 132 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 MALP21145 153 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 GNG4P50150 75 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 RAB14P61106 215 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 PEA15Q15121 130 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 LGALS9BQ3B8N2 356 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 RASL10AQ92737 203 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 PTH2Q96A98 100 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 C9orf85Q96MD7 179 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 C18orf15Q96N68 181 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 KRTAP4-5Q9BYR2 181 aa5.22□□□□□ -1.57
LINC01049-201ENST00000426840 MRPL16Q9NX20 251 aaKnown RBP5.22□□□□□ -1.57
LINC01049-201ENST00000426840 CSMD3Q7Z407 3707 aa5.21□□□□□ -1.57
LINC01049-201ENST00000426840 TRGV1A0A0A0MS02 117 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 NUPR2A6NF83 97 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 K7EN84 100 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 M0R2P5 195 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 ATP5G1P05496 136 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 MGST1P10620 155 aaKnown RBP5.21□□□□□ -1.58
LINC01049-201ENST00000426840 RPL19P84098 196 aaKnown RBP5.21□□□□□ -1.58
LINC01049-201ENST00000426840 OR5I1Q13606 314 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 PRR27Q6MZM9 219 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 POM121L12Q8N7R1 296 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 SMDT1Q9H4I9 107 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 IL36BQ9NZH7 164 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 APLNQ9ULZ1 77 aa5.21□□□□□ -1.58
LINC01049-201ENST00000426840 KLK5Q9Y337 293 aaPredicted RBP5.21□□□□□ -1.58
LINC01049-201ENST00000426840 TMSB15BA0A087X1C1 80 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 ZNF727A8MUV8 499 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 IGLL5B9A064 214 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 SLPIP03973 132 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 CXCL1P09341 107 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 ARMS2P0C7Q2 107 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 HTN3P15516 51 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 ASIPP42127 132 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 CEBPGP53567 150 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 PTTG1IPP53801 180 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 SMIM7Q9BQ49 75 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 SCRT2Q9NQ03 307 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 BIN3Q9NQY0 253 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 LY96Q9Y6Y9 160 aa5.2□□□□□ -1.58
LINC01049-201ENST00000426840 NACAE9PAV3 2078 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 TRGV2A0A075B6R0 118 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 IGHV4-4A0A075B6R2 117 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 PRSS29PA6NIE9 313 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 F5H768 121 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 RS1O15537 224 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 GYPEP15421 78 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 S100A4P26447 101 aaKnown RBP5.19□□□□□ -1.58
LINC01049-201ENST00000426840 FHL2Q14192 279 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 TMEM241Q24JQ0 296 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 ZNF876PQ49A33 203 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 FAM74A3Q4VXF1 159 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 OR2D3Q8NGH3 330 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 DAZAP1Q96EP5 407 aaKnown RBP5.19□□□□□ -1.58
LINC01049-201ENST00000426840 ZNF479Q96JC4 524 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 FAM210BQ96KR6 192 aa5.19□□□□□ -1.58
LINC01049-201ENST00000426840 H3BVH4 76 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 SNAI2O43623 268 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 P01737 135 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 IGHV3-53P01767 116 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 SFTA3P0C7M3 94 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 IGLC6P0CF74 106 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 GZMBP10144 247 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 TCTAP57738 103 aa5.18□□□□□ -1.58
LINC01049-201ENST00000426840 RPS20P60866 119 aaKnown RBP5.18□□□□□ -1.58
LINC01049-201ENST00000426840 PIK3CD-AS1Q5SR53 167 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms