RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 RNASE3P12724 160 aaKnown RBP4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 TCL1AP56279 114 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 ZFAND6Q6FIF0 208 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 ZNF493Q6ZR52 646 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 Q6ZTC4 211 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 Q6ZTI0 123 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 LINC01551Q86U37 167 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 COMMD7Q86VX2 200 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 C11orf45Q8TAV5 145 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 WWC2-AS2Q96NR7 200 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 RNASE7Q9H1E1 156 aaKnown RBP4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 SDF2L1Q9HCN8 221 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 MRPL16Q9NX20 251 aaKnown RBP4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 TIMM8BQ9Y5J9 83 aaPredicted RBP4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 DNAH7Q8WXX0 4024 aa4.05□□□□□ -1.76
HERPUD2-204ENST00000426180 TRGV1A0A0A0MS02 117 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 MUC21A0A0G2JKD1 596 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 MUC21A0A140T8X8 626 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 GAGE12BA1L429 117 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 LYRM9A8MSI8 78 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 SNURFLB1AK76 121 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 H3BVH4 76 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 GAGE7O76087 117 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 GAGE12FP0CL80 117 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 GAGE12GP0CL81 117 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 GAGE12IP0CL82 117 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 SPART-AS1P0CW21 52 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 ADCYAP1P18509 176 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 RPL23P62829 140 aaKnown RBP4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 ZNF415Q09FC8 603 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 DAZ2Q13117 558 aaKnown RBP4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 TMEM241Q24JQ0 296 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 SOHLH1Q5JUK2 328 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 IBA57Q5T440 356 aaKnown RBP4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 LINC00612Q8N6U2 182 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 NUDT10Q8NFP7 164 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 MUC7Q8TAX7 377 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 SMIM12Q96EX1 92 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 NUDT11Q96G61 164 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 KCNS1Q96KK3 526 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 C9orf85Q96MD7 179 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 SMDT1Q9H4I9 107 aa4.04□□□□□ -1.76
HERPUD2-204ENST00000426180 P01737 135 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 IGHV3-53P01767 116 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 ARMS2P0C7Q2 107 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 ASIPP42127 132 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 DAD1P61803 113 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 ADIRFQ15847 76 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 FAM74A3Q4VXF1 159 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 DNLZQ5SXM8 178 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 OR2D3Q8NGH3 330 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 ISOC2Q96AB3 205 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 DAZAP1Q96EP5 407 aaKnown RBP4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 SPXQ9BT56 116 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 JPT2Q9H910 190 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 SCRT2Q9NQ03 307 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 NAT8Q9UHE5 227 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 LY96Q9Y6Y9 160 aa4.03□□□□□ -1.76
HERPUD2-204ENST00000426180 CSMD3Q7Z407 3707 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 TMEM218A2RU14 115 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 M0R2P5 195 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 GATCO43716 136 aaKnown RBP4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 IGLC6P0CF74 106 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 HTN3P15516 51 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 S100A1P23297 94 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 S100A4P26447 101 aaKnown RBP4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 SSTP61278 116 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 UQCC3Q6UW78 93 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 FAM231DQ6ZW35 169 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 OR10AG1Q8NH19 301 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 PHLDA1Q8WV24 401 aaPredicted RBP4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 RPP21Q9H633 154 aaKnown RBP4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 BIN3Q9NQY0 253 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 STARD9Q9P2P6 4700 aa4.02□□□□□ -1.77
HERPUD2-204ENST00000426180 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 DEFB131BA0A096LNP1 70 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 IGHV3-73A0A0B4J1V6 119 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 TRAV10A0A0B4J240 114 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 TEX48A0A1B0GUV7 120 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 RS1O15537 224 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 SNAI2O43623 268 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 CXCL1P09341 107 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 ERVFC1-1P60608 527 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 LGALS9BQ3B8N2 356 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 ZNF876PQ49A33 203 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 CASC10Q5T4H9 136 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 CFAP126Q5VTH2 177 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 CEMP1Q6PRD7 247 aaPredicted RBP4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 LYZL1Q6UWQ5 148 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 Q6ZSN1 163 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 SLC7A5P1Q8MH63 180 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 GTSF1Q8WW33 167 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 RASL10AQ92737 203 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 PTH2Q96A98 100 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 SFRP2Q96HF1 295 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 ZNF479Q96JC4 524 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 TPPP3Q9BW30 176 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 SAMD10Q9BYL1 202 aa4.01□□□□□ -1.77
HERPUD2-204ENST00000426180 OSTCQ9NRP0 149 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms