RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 GCGP01275 180 aa12.35□□□□□ -0.43
AC004540.1-203ENST00000421862 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
AC004540.1-203ENST00000421862 ATP6V0E2Q8NHE4 81 aa12.35□□□□□ -0.43
AC004540.1-203ENST00000421862 SSNA1O43805 119 aa12.34□□□□□ -0.43
AC004540.1-203ENST00000421862 Q8N3U1 123 aa12.34□□□□□ -0.43
AC004540.1-203ENST00000421862 TM2D2Q9BX73 214 aa12.34□□□□□ -0.43
AC004540.1-203ENST00000421862 PSG8Q9UQ74 426 aa12.34□□□□□ -0.43
AC004540.1-203ENST00000421862 GGTLC3B5MD39 225 aa12.33□□□□□ -0.44
AC004540.1-203ENST00000421862 PIK3CD-AS1Q5SR53 167 aa12.33□□□□□ -0.44
AC004540.1-203ENST00000421862 PARLQ9H300 379 aa12.33□□□□□ -0.44
AC004540.1-203ENST00000421862 K7EQM0 130 aa12.32□□□□□ -0.44
AC004540.1-203ENST00000421862 FLI1Q01543 452 aaPredicted RBP12.32□□□□□ -0.44
AC004540.1-203ENST00000421862 ZFP69Q49AA0 526 aa12.32□□□□□ -0.44
AC004540.1-203ENST00000421862 SMUG1Q53HV7 270 aa12.32□□□□□ -0.44
AC004540.1-203ENST00000421862 ZFP2Q6ZN57 461 aa12.32□□□□□ -0.44
AC004540.1-203ENST00000421862 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
AC004540.1-203ENST00000421862 GCHFRP30047 84 aa12.31□□□□□ -0.44
AC004540.1-203ENST00000421862 CYB561D1Q8N8Q1 229 aa12.31□□□□□ -0.44
AC004540.1-203ENST00000421862 RAB24Q969Q5 203 aa12.31□□□□□ -0.44
AC004540.1-203ENST00000421862 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
AC004540.1-203ENST00000421862 UFSP1Q6NVU6 142 aa12.3□□□□□ -0.44
AC004540.1-203ENST00000421862 LINC00479Q96M42 142 aa12.3□□□□□ -0.44
AC004540.1-203ENST00000421862 SH3BGRL3Q9H299 93 aa12.3□□□□□ -0.44
AC004540.1-203ENST00000421862 IGKV3D-20A0A0C4DH25 116 aa12.29□□□□□ -0.44
AC004540.1-203ENST00000421862 A8MWV9 139 aa12.29□□□□□ -0.44
AC004540.1-203ENST00000421862 PLA2G1BP04054 148 aaKnown RBP12.29□□□□□ -0.44
AC004540.1-203ENST00000421862 LINC00528Q8N1L1 170 aa12.29□□□□□ -0.44
AC004540.1-203ENST00000421862 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
AC004540.1-203ENST00000421862 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
AC004540.1-203ENST00000421862 KRTAP29-1A8MX34 341 aaPredicted RBP12.28□□□□□ -0.44
AC004540.1-203ENST00000421862 TOR2AQ5JU69 321 aa12.28□□□□□ -0.44
AC004540.1-203ENST00000421862 SAPCD1Q5SSQ6 148 aa12.28□□□□□ -0.44
AC004540.1-203ENST00000421862 PRNTQ86SH4 94 aa12.28□□□□□ -0.44
AC004540.1-203ENST00000421862 TMEM167BQ9NRX6 74 aa12.28□□□□□ -0.44
AC004540.1-203ENST00000421862 GAGE12JA6NER3 117 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 J3QL48 77 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 ATP6V0CP27449 155 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 SUMO1P63165 101 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 GAGE1Q13065 139 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 GAGE4Q13068 117 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 GAGE5Q13069 117 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 GAGE13Q4V321 117 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 AQP10Q96PS8 301 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 Q9UF83 564 aa12.27□□□□□ -0.45
AC004540.1-203ENST00000421862 A0A087WWC5 75 aa12.26□□□□□ -0.45
AC004540.1-203ENST00000421862 CXorf1O96002 111 aa12.26□□□□□ -0.45
AC004540.1-203ENST00000421862 MBP02144 154 aa12.26□□□□□ -0.45
AC004540.1-203ENST00000421862 DEFA1P59665 94 aa12.26□□□□□ -0.45
AC004540.1-203ENST00000421862 DEFA3P59666 94 aa12.26□□□□□ -0.45
AC004540.1-203ENST00000421862 SERF2P84101 59 aa12.26□□□□□ -0.45
AC004540.1-203ENST00000421862 IL36BQ9NZH7 164 aa12.26□□□□□ -0.45
AC004540.1-203ENST00000421862 LRP1Q07954 4544 aaKnown RBP12.25□□□□□ -0.45
AC004540.1-203ENST00000421862 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
AC004540.1-203ENST00000421862 LECT2O14960 151 aa12.25□□□□□ -0.45
AC004540.1-203ENST00000421862 COX11Q9Y6N1 276 aa12.25□□□□□ -0.45
AC004540.1-203ENST00000421862 ARL2-SNX15V9GYD0 113 aa12.25□□□□□ -0.45
AC004540.1-203ENST00000421862 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 ASIPP42127 132 aa12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 DNLZQ5SXM8 178 aa12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 SCXQ7RTU7 201 aa12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 Q86TA4 180 aa12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 C14orf178Q8N769 122 aaPredicted RBP12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 SAMD10Q9BYL1 202 aa12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 JPT2Q9H910 190 aa12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 TNFSF18Q9UNG2 199 aa12.24□□□□□ -0.45
AC004540.1-203ENST00000421862 A6NHS1 94 aa12.23□□□□□ -0.45
AC004540.1-203ENST00000421862 RHODO00212 210 aa12.23□□□□□ -0.45
AC004540.1-203ENST00000421862 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
AC004540.1-203ENST00000421862 FGF8P55075 233 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-203ENST00000421862 KRTAP10-4P60372 401 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-203ENST00000421862 LGALSLQ3ZCW2 172 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-203ENST00000421862 NIT1Q86X76 327 aa12.23□□□□□ -0.45
AC004540.1-203ENST00000421862 DEFB104AQ8WTQ1 72 aa12.23□□□□□ -0.45
AC004540.1-203ENST00000421862 FABP5P3A8MUU1 101 aa12.22□□□□□ -0.45
AC004540.1-203ENST00000421862 OR2T35Q8NGX2 323 aa12.22□□□□□ -0.45
AC004540.1-203ENST00000421862 BAALCQ8WXS3 180 aa12.22□□□□□ -0.45
AC004540.1-203ENST00000421862 ACTR3CQ9C0K3 210 aaPredicted RBP12.22□□□□□ -0.45
AC004540.1-203ENST00000421862 FAT3Q8TDW7 4589 aa12.22□□□□□ -0.45
AC004540.1-203ENST00000421862 HMCN2Q8NDA2 5059 aa12.22□□□□□ -0.45
AC004540.1-203ENST00000421862 TRAV34A0A0B4J273 112 aa12.21□□□□□ -0.45
AC004540.1-203ENST00000421862 H3BVH4 76 aa12.21□□□□□ -0.45
AC004540.1-203ENST00000421862 DMRTA1Q5VZB9 504 aa12.21□□□□□ -0.45
AC004540.1-203ENST00000421862 ATRAIDQ6UW56 229 aa12.21□□□□□ -0.45
AC004540.1-203ENST00000421862 COX8CQ7Z4L0 72 aa12.21□□□□□ -0.45
AC004540.1-203ENST00000421862 RMI2Q96E14 147 aa12.21□□□□□ -0.45
AC004540.1-203ENST00000421862 CHCHD7Q9BUK0 85 aa12.21□□□□□ -0.45
AC004540.1-203ENST00000421862 ALG5Q9Y673 324 aa12.21□□□□□ -0.45
AC004540.1-203ENST00000421862 B4DEV8 164 aa12.2□□□□□ -0.46
AC004540.1-203ENST00000421862 ZNF726P1Q15940 193 aa12.2□□□□□ -0.46
AC004540.1-203ENST00000421862 LINC01620Q4KN68 170 aa12.2□□□□□ -0.46
AC004540.1-203ENST00000421862 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
AC004540.1-203ENST00000421862 PKHD1L1Q86WI1 4243 aa12.19□□□□□ -0.46
AC004540.1-203ENST00000421862 RNF222A6NCQ9 220 aa12.19□□□□□ -0.46
AC004540.1-203ENST00000421862 KRBOX1C9JBD0 128 aa12.19□□□□□ -0.46
AC004540.1-203ENST00000421862 PEX7O00628 323 aa12.19□□□□□ -0.46
AC004540.1-203ENST00000421862 SEC11BP0C7V7 166 aa12.19□□□□□ -0.46
AC004540.1-203ENST00000421862 Q8N976 141 aa12.19□□□□□ -0.46
AC004540.1-203ENST00000421862 ZC2HC1AQ96GY0 325 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms