RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
BRAT1-202ENST00000421712 TRAV4A0A0B4J268 109 aa11.04□□□□□ -0.64
BRAT1-202ENST00000421712 PAX4O43316 350 aa11.04□□□□□ -0.64
BRAT1-202ENST00000421712 IGLV2-8P01709 118 aa11.04□□□□□ -0.64
BRAT1-202ENST00000421712 RPL19P84098 196 aaKnown RBP11.04□□□□□ -0.64
BRAT1-202ENST00000421712 SLAQ13239 276 aa11.04□□□□□ -0.64
BRAT1-202ENST00000421712 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
BRAT1-202ENST00000421712 ZNF479Q96JC4 524 aa11.04□□□□□ -0.64
BRAT1-202ENST00000421712 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
BRAT1-202ENST00000421712 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
BRAT1-202ENST00000421712 TRBV20OR9-2A0A075B6H5 130 aa11.03□□□□□ -0.64
BRAT1-202ENST00000421712 RAB14P61106 215 aa11.03□□□□□ -0.64
BRAT1-202ENST00000421712 SYT8Q8NBV8 401 aa11.03□□□□□ -0.64
BRAT1-202ENST00000421712 PRO0255Q9UI72 69 aa11.03□□□□□ -0.64
BRAT1-202ENST00000421712 FHL2Q14192 279 aa11.02□□□□□ -0.65
BRAT1-202ENST00000421712 PEA15Q15121 130 aa11.02□□□□□ -0.65
BRAT1-202ENST00000421712 DNLZQ5SXM8 178 aa11.02□□□□□ -0.65
BRAT1-202ENST00000421712 POM121L12Q8N7R1 296 aa11.02□□□□□ -0.65
BRAT1-202ENST00000421712 IGHV3-73A0A0B4J1V6 119 aa11.01□□□□□ -0.65
BRAT1-202ENST00000421712 P01737 135 aa11.01□□□□□ -0.65
BRAT1-202ENST00000421712 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
BRAT1-202ENST00000421712 OCC1Q8TAD7 63 aa11.01□□□□□ -0.65
BRAT1-202ENST00000421712 PTH2Q96A98 100 aa11.01□□□□□ -0.65
BRAT1-202ENST00000421712 ZNF727A8MUV8 499 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 H3BNG1 76 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 M0R381 172 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 RS1O15537 224 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
BRAT1-202ENST00000421712 CRYBA4P53673 196 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 SSTP61278 116 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 CFAP126Q5VTH2 177 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 DMRTA1Q5VZB9 504 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 VSIG2Q96IQ7 327 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 SMIM7Q9BQ49 75 aa11□□□□□ -0.65
BRAT1-202ENST00000421712 XKRY2A2RUG3 117 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 C19orf71A6NCJ1 209 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 A8MWV9 139 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 NDUFS6O75380 124 aaKnown RBP10.99□□□□□ -0.65
BRAT1-202ENST00000421712 CXCL1P09341 107 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 CCL18P55774 89 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 RPS20P60866 119 aaKnown RBP10.99□□□□□ -0.65
BRAT1-202ENST00000421712 ZNF575Q86XF7 245 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 ZFP82Q8N141 532 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 TPPP3Q9BW30 176 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 ICOSQ9Y6W8 199 aa10.99□□□□□ -0.65
BRAT1-202ENST00000421712 ALMS1Q8TCU4 4167 aa10.98□□□□□ -0.65
BRAT1-202ENST00000421712 CIDEAO60543 219 aa10.98□□□□□ -0.65
BRAT1-202ENST00000421712 MED14OSP0DP75 135 aa10.98□□□□□ -0.65
BRAT1-202ENST00000421712 GZMBP10144 247 aa10.98□□□□□ -0.65
BRAT1-202ENST00000421712 NUDT10Q8NFP7 164 aa10.98□□□□□ -0.65
BRAT1-202ENST00000421712 NUDT11Q96G61 164 aa10.98□□□□□ -0.65
BRAT1-202ENST00000421712 SCRT2Q9NQ03 307 aa10.98□□□□□ -0.65
BRAT1-202ENST00000421712 LYSTQ99698 3801 aa10.98□□□□□ -0.65
BRAT1-202ENST00000421712 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 MUC21A0A0G2JKD1 596 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 MUC21A0A140T8X8 626 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 K7EN84 100 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 GYPEP15421 78 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 RNF212Q495C1 297 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 PIK3CD-AS1Q5SR53 167 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 SPANXN1Q5VSR9 72 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 RNASE7Q9H1E1 156 aaKnown RBP10.97□□□□□ -0.65
BRAT1-202ENST00000421712 JPT2Q9H910 190 aa10.97□□□□□ -0.65
BRAT1-202ENST00000421712 A0A096LPF7 62 aa10.96□□□□□ -0.65
BRAT1-202ENST00000421712 SRSF3P84103 164 aaKnown RBP10.96□□□□□ -0.65
BRAT1-202ENST00000421712 MRPL23Q16540 153 aaKnown RBP10.96□□□□□ -0.65
BRAT1-202ENST00000421712 FAM74A4Q5TZK3 123 aa10.96□□□□□ -0.65
BRAT1-202ENST00000421712 A0A087WWL8 130 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 C9JQL5 133 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
BRAT1-202ENST00000421712 ERVFC1-1P60608 527 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 OR10AG1Q8NH19 301 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 SAMD10Q9BYL1 202 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 SMDT1Q9H4I9 107 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 RPP21Q9H633 154 aaKnown RBP10.95□□□□□ -0.66
BRAT1-202ENST00000421712 LY96Q9Y6Y9 160 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 DNAH1Q9P2D7 4330 aa10.95□□□□□ -0.66
BRAT1-202ENST00000421712 SNAI2O43623 268 aa10.94□□□□□ -0.66
BRAT1-202ENST00000421712 GATCO43716 136 aaKnown RBP10.94□□□□□ -0.66
BRAT1-202ENST00000421712 OR5AL1P0C617 328 aa10.94□□□□□ -0.66
BRAT1-202ENST00000421712 SRIP30626 198 aa10.94□□□□□ -0.66
BRAT1-202ENST00000421712 TMEM241Q24JQ0 296 aa10.94□□□□□ -0.66
BRAT1-202ENST00000421712 FAM74A3Q4VXF1 159 aa10.94□□□□□ -0.66
BRAT1-202ENST00000421712 ZFP2Q6ZN57 461 aa10.94□□□□□ -0.66
BRAT1-202ENST00000421712 SLC25A29Q8N8R3 303 aa10.94□□□□□ -0.66
BRAT1-202ENST00000421712 SFRP2Q96HF1 295 aa10.94□□□□□ -0.66
BRAT1-202ENST00000421712 IGLV2-18A0A075B6J9 118 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 LOC100131303A0A0U1RQF7 123 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 K7EQD1 137 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 RHODO00212 210 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 RHOHQ15669 191 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 ESRGQ1W209 222 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 NEGR1Q7Z3B1 354 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 LINC01551Q86U37 167 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 SSBP4Q9BWG4 385 aaPredicted RBP10.93□□□□□ -0.66
BRAT1-202ENST00000421712 LINC00588Q9Y4M8 146 aa10.93□□□□□ -0.66
BRAT1-202ENST00000421712 TRBV6-4A0A1B0GX49 114 aa10.92□□□□□ -0.66
BRAT1-202ENST00000421712 M0R2N4 97 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms