RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 ZNF503Q96F45 646 aa11.3□□□□□ -0.6
CHRD-204ENST00000420973 ZNF56Q15929 161 aa11.29□□□□□ -0.6
CHRD-204ENST00000420973 PATE2Q6UY27 113 aa11.29□□□□□ -0.6
CHRD-204ENST00000420973 HELZ2Q9BYK8 2649 aaKnown RBP11.29□□□□□ -0.6
CHRD-204ENST00000420973 JMJD1CQ15652 2540 aa11.29□□□□□ -0.6
CHRD-204ENST00000420973 G3V318 75 aa11.29□□□□□ -0.6
CHRD-204ENST00000420973 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
CHRD-204ENST00000420973 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
CHRD-204ENST00000420973 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
CHRD-204ENST00000420973 PRORYQ9H606 182 aa11.29□□□□□ -0.6
CHRD-204ENST00000420973 NDUFA3O95167 84 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 ASIPP42127 132 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 EFNA4P52798 201 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 HRCT1Q6UXD1 115 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 LINC00311Q8N616 119 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 GATD1Q8NB37 220 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 NDPQ00604 133 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 TMEM101Q96IK0 257 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 C17orf77Q96MU5 243 aa11.28□□□□□ -0.6
CHRD-204ENST00000420973 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
CHRD-204ENST00000420973 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
CHRD-204ENST00000420973 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
CHRD-204ENST00000420973 SLC25A20O43772 301 aa11.27□□□□□ -0.61
CHRD-204ENST00000420973 CD7P09564 240 aa11.27□□□□□ -0.61
CHRD-204ENST00000420973 SLC25A2Q9BXI2 301 aa11.27□□□□□ -0.61
CHRD-204ENST00000420973 A0A096LNJ9 63 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 MYMXA0A1B0GTQ4 84 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 DPM2O94777 84 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 TCL1BO95988 128 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 IGHV4-39P01824 125 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 CKS2P33552 79 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 GOLT1AQ6ZVE7 132 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 FAM236AA0A1B0GUQ0 79 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 FAM236BA0A1B0GV22 79 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 M0R3E3 92 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 TWIST1Q15672 202 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 MORN3Q6PF18 240 aaPredicted RBP11.26□□□□□ -0.61
CHRD-204ENST00000420973 TEX15Q9BXT5 2789 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 WIPF1O43516 503 aa11.26□□□□□ -0.61
CHRD-204ENST00000420973 IGHV4-61A0A0C4DH41 118 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 RPL11P62913 178 aaKnown RBP11.25□□□□□ -0.61
CHRD-204ENST00000420973 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 LINC01587Q99440 93 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 ZNF256Q9Y2P7 627 aaPredicted RBP11.25□□□□□ -0.61
CHRD-204ENST00000420973 HIVEP2P31629 2446 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 IGKV1D-37A0A075B6S9 117 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 LEPP41159 167 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 PMVKQ15126 192 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 NDUFA7O95182 113 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 C11orf71Q6IPW1 123 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 ZNF329Q86UD4 541 aa11.25□□□□□ -0.61
CHRD-204ENST00000420973 C2CD3Q4AC94 2353 aa11.24□□□□□ -0.61
CHRD-204ENST00000420973 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
CHRD-204ENST00000420973 C7orf69Q9H7B7 122 aa11.24□□□□□ -0.61
CHRD-204ENST00000420973 TEX22C9J3V5 150 aa11.24□□□□□ -0.61
CHRD-204ENST00000420973 OR11H6Q8NGC7 330 aa11.24□□□□□ -0.61
CHRD-204ENST00000420973 PKIGQ9Y2B9 76 aa11.24□□□□□ -0.61
CHRD-204ENST00000420973 HOXB4P17483 251 aaPredicted RBP11.23□□□□□ -0.61
CHRD-204ENST00000420973 BEX4Q9NWD9 120 aaPredicted RBP11.23□□□□□ -0.61
CHRD-204ENST00000420973 Q1RN00 199 aa11.23□□□□□ -0.61
CHRD-204ENST00000420973 GAGE2AQ6NT46 116 aa11.23□□□□□ -0.61
CHRD-204ENST00000420973 MRPL32Q9BYC8 188 aaKnown RBP11.23□□□□□ -0.61
CHRD-204ENST00000420973 Q71RC1 249 aaPredicted RBP11.23□□□□□ -0.61
CHRD-204ENST00000420973 FLNBO75369 2602 aaKnown RBP11.23□□□□□ -0.61
CHRD-204ENST00000420973 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
CHRD-204ENST00000420973 Q9H3A6 140 aa11.22□□□□□ -0.61
CHRD-204ENST00000420973 IGHV4-30-2A0A087WSY4 118 aa11.22□□□□□ -0.61
CHRD-204ENST00000420973 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
CHRD-204ENST00000420973 TAL2Q16559 108 aa11.22□□□□□ -0.61
CHRD-204ENST00000420973 TMEM158Q8WZ71 300 aa11.22□□□□□ -0.61
CHRD-204ENST00000420973 FAM167A-AS1Q96KT0 104 aa11.22□□□□□ -0.61
CHRD-204ENST00000420973 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
CHRD-204ENST00000420973 MRGPRG-AS1Q2M3A8 158 aa11.22□□□□□ -0.61
CHRD-204ENST00000420973 FLNAP21333 2647 aaKnown RBP11.21□□□□□ -0.61
CHRD-204ENST00000420973 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.61
CHRD-204ENST00000420973 HAX1O00165 279 aa11.21□□□□□ -0.61
CHRD-204ENST00000420973 ATP5LO75964 103 aa11.21□□□□□ -0.61
CHRD-204ENST00000420973 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
CHRD-204ENST00000420973 LRRC75A-AS1Q8N1F1 130 aa11.21□□□□□ -0.61
CHRD-204ENST00000420973 SLC25A39Q9BZJ4 359 aaPredicted RBP11.21□□□□□ -0.61
CHRD-204ENST00000420973 FN1P02751 2386 aaKnown RBP11.21□□□□□ -0.61
CHRD-204ENST00000420973 NPYP01303 97 aa11.21□□□□□ -0.62
CHRD-204ENST00000420973 HIST2H2BCQ6DN03 193 aa11.21□□□□□ -0.62
CHRD-204ENST00000420973 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.62
CHRD-204ENST00000420973 HHLA3Q9XRX5 114 aa11.21□□□□□ -0.62
CHRD-204ENST00000420973 TEX49A0A1B0GTD5 131 aa11.21□□□□□ -0.62
CHRD-204ENST00000420973 ATP6V0E1O15342 81 aa11.21□□□□□ -0.62
CHRD-204ENST00000420973 C15orf32Q32M92 178 aa11.21□□□□□ -0.62
CHRD-204ENST00000420973 Q8N1Y9 231 aa11.21□□□□□ -0.62
CHRD-204ENST00000420973 RNF125Q96EQ8 232 aa11.21□□□□□ -0.62
CHRD-204ENST00000420973 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
CHRD-204ENST00000420973 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
CHRD-204ENST00000420973 IGHV4-38-2P0DP08 117 aa11.2□□□□□ -0.62
CHRD-204ENST00000420973 DTX2Q86UW9 622 aa11.2□□□□□ -0.62
CHRD-204ENST00000420973 BBC3Q96PG8 261 aaPredicted RBP11.2□□□□□ -0.62
CHRD-204ENST00000420973 TMEM213A2RRL7 107 aa11.2□□□□□ -0.62
CHRD-204ENST00000420973 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
CHRD-204ENST00000420973 ZNF785A8K8V0 405 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms