RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 C11orf21Q9P2W6 132 aa8.5□□□□□ -1.05
LINC00339-203ENST00000420503 Q9UF83 564 aa8.5□□□□□ -1.05
LINC00339-203ENST00000420503 RBAKDNA6NC62 111 aa8.49□□□□□ -1.05
LINC00339-203ENST00000420503 BCL2L11O43521 198 aa8.49□□□□□ -1.05
LINC00339-203ENST00000420503 TIRAPP58753 221 aa8.49□□□□□ -1.05
LINC00339-203ENST00000420503 TDRG1Q3Y452 100 aa8.49□□□□□ -1.05
LINC00339-203ENST00000420503 LGALSLQ3ZCW2 172 aaPredicted RBP8.49□□□□□ -1.05
LINC00339-203ENST00000420503 TMEM75Q8N9X5 138 aa8.49□□□□□ -1.05
LINC00339-203ENST00000420503 OR10G9Q8NGN4 311 aa8.49□□□□□ -1.05
LINC00339-203ENST00000420503 OR10G7Q8NGN6 311 aa8.49□□□□□ -1.05
LINC00339-203ENST00000420503 PLA2G1BP04054 148 aaKnown RBP8.48□□□□□ -1.05
LINC00339-203ENST00000420503 CSN1S1P47710 185 aa8.48□□□□□ -1.05
LINC00339-203ENST00000420503 ZNF80P51504 273 aaPredicted RBP8.48□□□□□ -1.05
LINC00339-203ENST00000420503 KHDC3LQ587J8 217 aa8.48□□□□□ -1.05
LINC00339-203ENST00000420503 CFAP126Q5VTH2 177 aa8.48□□□□□ -1.05
LINC00339-203ENST00000420503 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
LINC00339-203ENST00000420503 TMUB2Q71RG4 321 aa8.48□□□□□ -1.05
LINC00339-203ENST00000420503 TRAV8-6A0A0B4J262 113 aa8.47□□□□□ -1.05
LINC00339-203ENST00000420503 A0A1W2PPV4 95 aa8.47□□□□□ -1.05
LINC00339-203ENST00000420503 FBLL1A6NHQ2 334 aaKnown RBP8.47□□□□□ -1.05
LINC00339-203ENST00000420503 MBP02144 154 aa8.47□□□□□ -1.05
LINC00339-203ENST00000420503 CDC34P49427 236 aaPredicted RBP8.47□□□□□ -1.05
LINC00339-203ENST00000420503 TAS2R45P59539 299 aa8.47□□□□□ -1.05
LINC00339-203ENST00000420503 DAZ4Q86SG3 579 aaKnown RBP8.47□□□□□ -1.05
LINC00339-203ENST00000420503 BAALCQ8WXS3 180 aa8.47□□□□□ -1.05
LINC00339-203ENST00000420503 DAZ3Q9NR90 486 aaKnown RBP8.47□□□□□ -1.05
LINC00339-203ENST00000420503 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
LINC00339-203ENST00000420503 KANTRA0A1W2PQU2 76 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 RS1O15537 224 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 STAG3L2P0CL84 134 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 STAG3L3P0CL85 134 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 ZNF726P1Q15940 193 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 LELP1Q5T871 98 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 PQLC2Q6ZP29 291 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 STOML3Q8TAV4 291 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 DEFB104AQ8WTQ1 72 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 RAB24Q969Q5 203 aa8.46□□□□□ -1.06
LINC00339-203ENST00000420503 PGPA6NDG6 321 aa8.45□□□□□ -1.06
LINC00339-203ENST00000420503 PGPEP1LA6NFU8 196 aa8.45□□□□□ -1.06
LINC00339-203ENST00000420503 HMGB3O15347 200 aaKnown RBP8.45□□□□□ -1.06
LINC00339-203ENST00000420503 SEC11BP0C7V7 166 aa8.45□□□□□ -1.06
LINC00339-203ENST00000420503 ZNF876PQ49A33 203 aa8.45□□□□□ -1.06
LINC00339-203ENST00000420503 SUN5Q8TC36 379 aa8.45□□□□□ -1.06
LINC00339-203ENST00000420503 ZNF471Q9BX82 626 aaPredicted RBP8.45□□□□□ -1.06
LINC00339-203ENST00000420503 SDF2L1Q9HCN8 221 aa8.45□□□□□ -1.06
LINC00339-203ENST00000420503 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
LINC00339-203ENST00000420503 TRAV21A0A0B4J279 112 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 GAGE12JA6NER3 117 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 PFDN1O60925 122 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 PFN1P07737 140 aaKnown RBP8.44□□□□□ -1.06
LINC00339-203ENST00000420503 ARL14EPLP0DKL9 152 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
LINC00339-203ENST00000420503 GAGE1Q13065 139 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 GAGE4Q13068 117 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 GAGE5Q13069 117 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 RHOHQ15669 191 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 GAGE13Q4V321 117 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 ZNF506Q5JVG8 444 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 SH2D6Q7Z4S9 175 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 C9orf62Q8N4C0 152 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 ATP6V0E2Q8NHE4 81 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 ACTR3CQ9C0K3 210 aaPredicted RBP8.44□□□□□ -1.06
LINC00339-203ENST00000420503 GTSF1LQ9H1H1 148 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 TREM1Q9NP99 234 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 OTORQ9NRC9 128 aa8.44□□□□□ -1.06
LINC00339-203ENST00000420503 CTXND1A0A1B0GTU2 59 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 LINC00694P0DN24 101 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 TPT1P13693 172 aaKnown RBP8.43□□□□□ -1.06
LINC00339-203ENST00000420503 ZFP69Q49AA0 526 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 AKR1C8PQ5T2L2 129 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 PRADC1Q9BSG0 188 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 SAMD10Q9BYL1 202 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 JPT2Q9H910 190 aa8.43□□□□□ -1.06
LINC00339-203ENST00000420503 TRBV6-4A0A1B0GX49 114 aa8.42□□□□□ -1.06
LINC00339-203ENST00000420503 CXorf1O96002 111 aa8.42□□□□□ -1.06
LINC00339-203ENST00000420503 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
LINC00339-203ENST00000420503 GCHFRP30047 84 aa8.42□□□□□ -1.06
LINC00339-203ENST00000420503 FHITP49789 147 aa8.42□□□□□ -1.06
LINC00339-203ENST00000420503 EIF5AP63241 154 aaKnown RBP8.42□□□□□ -1.06
LINC00339-203ENST00000420503 LAGE3Q14657 143 aa8.42□□□□□ -1.06
LINC00339-203ENST00000420503 CMTM2Q8TAZ6 248 aa8.42□□□□□ -1.06
LINC00339-203ENST00000420503 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
LINC00339-203ENST00000420503 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
LINC00339-203ENST00000420503 SLC51BQ86UW2 128 aa8.41□□□□□ -1.06
LINC00339-203ENST00000420503 C14orf178Q8N769 122 aaPredicted RBP8.41□□□□□ -1.06
LINC00339-203ENST00000420503 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
LINC00339-203ENST00000420503 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
LINC00339-203ENST00000420503 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
LINC00339-203ENST00000420503 IGLV2-8P01709 118 aa8.4□□□□□ -1.06
LINC00339-203ENST00000420503 SERTAD4-AS1Q5TG53 156 aa8.4□□□□□ -1.06
LINC00339-203ENST00000420503 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.06
LINC00339-203ENST00000420503 PARLQ9H300 379 aa8.4□□□□□ -1.06
LINC00339-203ENST00000420503 TMEM167BQ9NRX6 74 aa8.4□□□□□ -1.06
LINC00339-203ENST00000420503 MAP1LC3B2A6NCE7 125 aa8.39□□□□□ -1.07
LINC00339-203ENST00000420503 RBFOX3A6NFN3 312 aa8.39□□□□□ -1.07
LINC00339-203ENST00000420503 GCGP01275 180 aa8.39□□□□□ -1.07
LINC00339-203ENST00000420503 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
LINC00339-203ENST00000420503 FGF8P55075 233 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms