RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 PRSS33Q8NF86 280 aa4.63□□□□□ -1.67
CHD2-202ENST00000420239 TMEM263Q8WUH6 116 aaKnown RBP4.63□□□□□ -1.67
CHD2-202ENST00000420239 NRGNQ92686 78 aa4.63□□□□□ -1.67
CHD2-202ENST00000420239 TMEM126AQ9H061 195 aa4.63□□□□□ -1.67
CHD2-202ENST00000420239 C21orf62Q9NYP8 219 aa4.63□□□□□ -1.67
CHD2-202ENST00000420239 CADP27708 2225 aa4.63□□□□□ -1.67
CHD2-202ENST00000420239 AHCTF1Q8WYP5 2266 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 TRAV2A0A0B4J234 112 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 LGALS9O00182 355 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 TIMM23O14925 209 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 P0DMU3 169 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 FAM231AP0DMU4 169 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 FAM231CP0DMU5 169 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 EMP1P54849 157 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 ORMDL2Q53FV1 153 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 C14orf178Q8N769 122 aaPredicted RBP4.62□□□□□ -1.67
CHD2-202ENST00000420239 C11orf44Q8N8P7 122 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 NPBQ8NG41 125 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 TIMD4Q96H15 378 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 A4D1N5 150 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 CCL8P80075 99 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 KLK9Q2XQG4 91 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 C2orf66Q6UXQ4 117 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 SLC25A29Q8N8R3 303 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 RPL39LQ96EH5 51 aaKnown RBP4.62□□□□□ -1.67
CHD2-202ENST00000420239 MRPL53Q96EL3 112 aaKnown RBP4.62□□□□□ -1.67
CHD2-202ENST00000420239 SLC50A1Q9BRV3 221 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 SPANXA1Q9NS26 97 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 KLK9Q9UKQ9 250 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 WDR87Q6ZQQ6 2873 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 VPS13AQ96RL7 3174 aa4.62□□□□□ -1.67
CHD2-202ENST00000420239 TRBV10-2A0A0K0K1G8 114 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 H3BMM0 161 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 H7C2G1 150 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 DUSP14O95147 198 aaKnown RBP4.61□□□□□ -1.67
CHD2-202ENST00000420239 TSHBP01222 138 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 IGHV4-39P01824 125 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 LINC00694P0DN24 101 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 FDCSPQ8NFU4 85 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 UBE2WQ96B02 151 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 FAM215AQ9Y5M1 114 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 TRBV7-7A0A0K0K1E9 115 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 M0R381 172 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 SPRY2O43597 315 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 SUMO2P61956 95 aaKnown RBP4.61□□□□□ -1.67
CHD2-202ENST00000420239 MRPL23Q16540 153 aaKnown RBP4.61□□□□□ -1.67
CHD2-202ENST00000420239 RNF182Q8N6D2 247 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 Q8NA96 180 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 DNAJC30Q96LL9 226 aa4.61□□□□□ -1.67
CHD2-202ENST00000420239 A0A0B4J2C4 111 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 LOC107984640A0A0U1RRK4 108 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 NBR2O15453 112 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 EBI3Q14213 229 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 ATXN8Q156A1 80 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 PAPPA-AS1Q5QFB9 102 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 POM121L12Q8N7R1 296 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 IGHV3OR16-8A0A075B7F1 116 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 IGHV1-69DA0A0B4J2H0 117 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 TRIAP1O43715 76 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 IGHV3-23P01764 117 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 HERVK_113P61574 105 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 ZNF56Q15929 161 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 C5orf47Q569G3 176 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 SPANXN1Q5VSR9 72 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 CITED2Q99967 270 aaPredicted RBP4.6□□□□□ -1.67
CHD2-202ENST00000420239 AGPAT4-IT1Q9H0P7 198 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 ABCA1O95477 2261 aa4.6□□□□□ -1.67
CHD2-202ENST00000420239 PLCE1Q9P212 2302 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 M0R2P5 195 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 CTSGP08311 255 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 FAM27E3Q08E93 113 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 XP32Q5T750 250 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 PRR9Q5T870 116 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 CEMP1Q6PRD7 247 aaPredicted RBP4.59□□□□□ -1.67
CHD2-202ENST00000420239 C9orf47Q6ZRZ4 202 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 ZNRF2Q8NHG8 242 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 KLK5Q9Y337 293 aaPredicted RBP4.59□□□□□ -1.67
CHD2-202ENST00000420239 LENEPQ9Y5L5 61 aa4.59□□□□□ -1.67
CHD2-202ENST00000420239 ZGRF1Q86YA3 2104 aa4.59□□□□□ -1.68
CHD2-202ENST00000420239 FAM236AA0A1B0GUQ0 79 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 FAM236BA0A1B0GV22 79 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 SMIM9A6NGZ8 99 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 OOSP1A8MZH6 123 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 H7C423 109 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 J3QQQ9 107 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 MED14OSP0DP75 135 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 MUSTN1Q8IVN3 82 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 LY6G5BQ8NDX9 201 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 CCL17Q92583 94 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 RNASE6Q93091 150 aaKnown RBP4.58□□□□□ -1.68
CHD2-202ENST00000420239 BEX4Q9NWD9 120 aaPredicted RBP4.58□□□□□ -1.68
CHD2-202ENST00000420239 TECTAO75443 2155 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 FAM240AA0A1B0GVK7 77 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 IGIPA6NJ69 53 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 F5H697 171 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 BUB3O43684 328 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 NDUFA7O95182 113 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 LY6DQ14210 128 aa4.58□□□□□ -1.68
CHD2-202ENST00000420239 Q1RN00 199 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms