RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 IGHV1-24A0A0C4DH33 117 aa14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 RBMY1BA6NDE4 496 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 RBMY1EA6NEQ0 496 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 NCR2O95944 276 aa14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 SCGB1D1O95968 90 aa14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 NPYP01303 97 aa14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 PPBPP02775 128 aa14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 RBMY1DP0C7P1 496 aaKnown RBP14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 NSUN5P1Q3KNT7 163 aa14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 NDUFA11Q86Y39 141 aa14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.2□□□□□ -0.14
RAB3IP-205ENST00000417413 MUC4Q99102 2169 aa14.19□□□□□ -0.14
RAB3IP-205ENST00000417413 GAS8-AS1O95177 125 aa14.19□□□□□ -0.14
RAB3IP-205ENST00000417413 S100A12P80511 92 aa14.19□□□□□ -0.14
RAB3IP-205ENST00000417413 SMIM15Q7Z3B0 74 aa14.19□□□□□ -0.14
RAB3IP-205ENST00000417413 PHLDA3Q9Y5J5 127 aa14.19□□□□□ -0.14
RAB3IP-205ENST00000417413 NXPH4O95158 308 aa14.19□□□□□ -0.14
RAB3IP-205ENST00000417413 PMCHL1Q16048 86 aa14.19□□□□□ -0.14
RAB3IP-205ENST00000417413 Q8N976 141 aa14.19□□□□□ -0.14
RAB3IP-205ENST00000417413 M0R381 172 aa14.18□□□□□ -0.14
RAB3IP-205ENST00000417413 CRXO43186 299 aaPredicted RBP14.18□□□□□ -0.14
RAB3IP-205ENST00000417413 CD7P09564 240 aa14.18□□□□□ -0.14
RAB3IP-205ENST00000417413 IFI27P40305 119 aaPredicted RBP14.18□□□□□ -0.14
RAB3IP-205ENST00000417413 KRTDAPP60985 99 aa14.18□□□□□ -0.14
RAB3IP-205ENST00000417413 ODF3L2Q3SX64 289 aa14.18□□□□□ -0.14
RAB3IP-205ENST00000417413 PRSS3P2Q8NHM4 247 aa14.18□□□□□ -0.14
RAB3IP-205ENST00000417413 C3orf79P0CE67 100 aa14.17□□□□□ -0.14
RAB3IP-205ENST00000417413 FXYD7P58549 80 aa14.17□□□□□ -0.14
RAB3IP-205ENST00000417413 LAMTOR2Q9Y2Q5 125 aa14.17□□□□□ -0.14
RAB3IP-205ENST00000417413 WNK1Q9H4A3 2382 aa14.17□□□□□ -0.14
RAB3IP-205ENST00000417413 IGHV1OR15-1A0A075B7D0 117 aa14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 IGHV3-16A0A0C4DH30 117 aa14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 LOC389332A0A1B0GUA5 103 aa14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 RBMY1A1P0DJD3 496 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 RBMY1CP0DJD4 496 aa14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 RBMY1FQ15415 496 aaKnown RBP14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 FA2HQ7L5A8 372 aa14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 AP5S1Q9NUS5 200 aa14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 C2CD3Q4AC94 2353 aa14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 MAST4O15021 2626 aa14.16□□□□□ -0.14
RAB3IP-205ENST00000417413 GATA1P15976 413 aaPredicted RBP14.15□□□□□ -0.14
RAB3IP-205ENST00000417413 C9orf85Q96MD7 179 aa14.15□□□□□ -0.14
RAB3IP-205ENST00000417413 CLUHP3Q96NS8 147 aa14.15□□□□□ -0.14
RAB3IP-205ENST00000417413 SAP30O75446 220 aa14.15□□□□□ -0.14
RAB3IP-205ENST00000417413 TNFRSF6BO95407 300 aa14.15□□□□□ -0.14
RAB3IP-205ENST00000417413 Q8N1Y9 231 aa14.15□□□□□ -0.14
RAB3IP-205ENST00000417413 IGLV1-51P01701 117 aa14.14□□□□□ -0.15
RAB3IP-205ENST00000417413 NRACQ8N912 160 aa14.14□□□□□ -0.15
RAB3IP-205ENST00000417413 DPH3P1Q9H4G8 78 aa14.14□□□□□ -0.15
RAB3IP-205ENST00000417413 MDFICQ9P1T7 246 aa14.14□□□□□ -0.15
RAB3IP-205ENST00000417413 MAP1LC3AQ9H492 121 aa14.13□□□□□ -0.15
RAB3IP-205ENST00000417413 JMJD1CQ15652 2540 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 TRAV26-2A0A0B4J265 109 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 LINC01546A6NGU7 62 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 TEX43Q6ZNM6 134 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 LINC00173Q6ZV60 143 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 ZNF664Q8N3J9 261 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 C14orf178Q8N769 122 aaPredicted RBP14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 OR2K2Q8NGT1 345 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 MRAP2Q96G30 205 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 KIF25-AS1Q9Y6Z4 181 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 PRSS47A8MTI9 375 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 LEPROTL1O95214 131 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 POM121L12Q8N7R1 296 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 AP1S3Q96PC3 154 aa14.12□□□□□ -0.15
RAB3IP-205ENST00000417413 A0A096LNJ9 63 aa14.11□□□□□ -0.15
RAB3IP-205ENST00000417413 OR11H12B2RN74 326 aa14.11□□□□□ -0.15
RAB3IP-205ENST00000417413 BTF3P20290 206 aaKnown RBP14.11□□□□□ -0.15
RAB3IP-205ENST00000417413 PKIAP61925 76 aa14.11□□□□□ -0.15
RAB3IP-205ENST00000417413 DEFB125Q8N687 156 aa14.11□□□□□ -0.15
RAB3IP-205ENST00000417413 PF4P02776 101 aa14.1□□□□□ -0.15
RAB3IP-205ENST00000417413 LINC00315P59091 139 aa14.1□□□□□ -0.15
RAB3IP-205ENST00000417413 PRO1933Q9H354 126 aa14.1□□□□□ -0.15
RAB3IP-205ENST00000417413 TRGV11A0A075B6L2 103 aa14.09□□□□□ -0.15
RAB3IP-205ENST00000417413 BEAN1Q3B7T3 259 aa14.09□□□□□ -0.15
RAB3IP-205ENST00000417413 LINC00482Q8N8I6 264 aa14.09□□□□□ -0.15
RAB3IP-205ENST00000417413 CITED1Q99966 193 aa14.09□□□□□ -0.15
RAB3IP-205ENST00000417413 SETD2Q9BYW2 2564 aaPredicted RBP14.09□□□□□ -0.15
RAB3IP-205ENST00000417413 IGLV2-18A0A075B6J9 118 aa14.08□□□□□ -0.15
RAB3IP-205ENST00000417413 CMC4P56277 68 aaPredicted RBP14.08□□□□□ -0.15
RAB3IP-205ENST00000417413 SPATA12Q7Z6I5 190 aa14.08□□□□□ -0.15
RAB3IP-205ENST00000417413 TRPT1Q86TN4 253 aaKnown RBP14.08□□□□□ -0.15
RAB3IP-205ENST00000417413 JPT2Q9H910 190 aa14.08□□□□□ -0.15
RAB3IP-205ENST00000417413 NXT2Q9NPJ8 142 aaKnown RBP14.08□□□□□ -0.15
RAB3IP-205ENST00000417413 KRTAP24-1Q3LI83 254 aa14.08□□□□□ -0.16
RAB3IP-205ENST00000417413 Q8N8P6 123 aa14.08□□□□□ -0.16
RAB3IP-205ENST00000417413 TMEM158Q8WZ71 300 aa14.08□□□□□ -0.16
RAB3IP-205ENST00000417413 TMEM70Q9BUB7 260 aa14.08□□□□□ -0.16
RAB3IP-205ENST00000417413 CBY3A6NI87 242 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 LINC00587B1AMM8 73 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 STHQ8IWL8 128 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 RASL10AQ92737 203 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 FAM110AQ9BQ89 295 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 C20orf144Q9BQM9 153 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 LINC00467Q9BRT7 94 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 C19orf73Q9NVV2 129 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 HSPB8Q9UJY1 196 aa14.07□□□□□ -0.16
RAB3IP-205ENST00000417413 SYS1-DBNDD2H3BUS1 97 aa14.06□□□□□ -0.16
RAB3IP-205ENST00000417413 MGPP08493 103 aa14.06□□□□□ -0.16
RAB3IP-205ENST00000417413 ZNF747Q9BV97 191 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms