RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 IGHV3-33P01772 117 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 IGHV3-30-3P0DP02 117 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 IGHV3-30-5P0DP03 117 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 CDC34P49427 236 aaPredicted RBP6.22□□□□□ -1.41
LINC01238-201ENST00000416204 TCL1AP56279 114 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
LINC01238-201ENST00000416204 FLI1Q01543 452 aaPredicted RBP6.22□□□□□ -1.41
LINC01238-201ENST00000416204 PRR9Q5T870 116 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 TVP23CQ96ET8 276 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 ZNF479Q96JC4 524 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 SLC50A1Q9BRV3 221 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 PRELID1Q9Y255 219 aa6.22□□□□□ -1.41
LINC01238-201ENST00000416204 A0A1W2PPV4 95 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 COX7A2P2O60397 106 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 MT-ND4LP03901 98 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 SLC25A5P05141 298 aaKnown RBP6.21□□□□□ -1.42
LINC01238-201ENST00000416204 PLP1P60201 277 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 MEF2BQ02080 365 aaPredicted RBP6.21□□□□□ -1.42
LINC01238-201ENST00000416204 FAM122CQ6P4D5 195 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 Q6ZSA8 131 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 CBLN2Q8IUK8 224 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 CYB561D1Q8N8Q1 229 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 RAB24Q969Q5 203 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 MGST2Q99735 147 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 VGLL1Q99990 258 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 TMEM242Q9NWH2 141 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 PXMP4Q9Y6I8 212 aa6.21□□□□□ -1.42
LINC01238-201ENST00000416204 TNXBP22105 4242 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 COLCA2A8K830 154 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 F6UZH7 168 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 CXorf1O96002 111 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 OXTP01178 125 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 IGLV2-8P01709 118 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 IGLC2P0DOY2 106 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 FGF8P55075 233 aaPredicted RBP6.2□□□□□ -1.42
LINC01238-201ENST00000416204 SELENOTP62341 195 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 ANXA2RQ3ZCQ2 193 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 MUC21Q5SSG8 566 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 BPIFA4PQ86YQ2 179 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 Q8N3U1 123 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 C10orf126Q8N4M7 172 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 NHLRC2Q8NBF2 726 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 TMEM37Q8WXS4 190 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 MRPL32Q9BYC8 188 aaKnown RBP6.2□□□□□ -1.42
LINC01238-201ENST00000416204 CTDSP1Q9GZU7 261 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 AGPAT4-IT1Q9H0P7 198 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 ARL2-SNX15V9GYD0 113 aa6.2□□□□□ -1.42
LINC01238-201ENST00000416204 IGKV2-40A0A087WW87 121 aaPredicted RBP6.19□□□□□ -1.42
LINC01238-201ENST00000416204 IGHV3-16A0A0C4DH30 117 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 IGHV3-38A0A0C4DH36 116 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 KLLNB2CW77 178 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 PDE6DO43924 150 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 IGKV2D-40P01614 121 aaPredicted RBP6.19□□□□□ -1.42
LINC01238-201ENST00000416204 GPX1P07203 203 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 STAG3L2P0CL84 134 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 STAG3L3P0CL85 134 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 HNRNPA3P51991 378 aaKnown RBP6.19□□□□□ -1.42
LINC01238-201ENST00000416204 SLAQ13239 276 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 C10orf113Q5VZT2 155 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 BLNKQ8WV28 456 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 LINC00477Q96M19 166 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 ODF3Q96PU9 254 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 SDF2L1Q9HCN8 221 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 NAT8Q9UHE5 227 aa6.19□□□□□ -1.42
LINC01238-201ENST00000416204 IGHV1OR15-1A0A075B7D0 117 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 ZNF727A8MUV8 499 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 IBA57-AS1B1ANH7 110 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 CEBPGP53567 150 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 OR10J3Q5JRS4 329 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 MIC13Q5XKP0 118 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 S100A7AQ86SG5 101 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 EXOC3-AS1Q8N2X6 119 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 HIST1H2BAQ96A08 127 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 FAM19A4Q96LR4 140 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 DNAJC4Q9NNZ3 241 aa6.18□□□□□ -1.42
LINC01238-201ENST00000416204 C1orf196B1AJZ1 125 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 K7EP13 123 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 TAS2R45P59539 299 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 RAB5BP61020 215 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 TMEM241Q24JQ0 296 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 IBA57Q5T440 356 aaKnown RBP6.17□□□□□ -1.42
LINC01238-201ENST00000416204 PQLC2Q6ZP29 291 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 ZFAND2AQ8N6M9 145 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 OR1L4Q8NGR5 311 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 Q8TAT8 98 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 SMIM7Q9BQ49 75 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 TMEM167BQ9NRX6 74 aa6.17□□□□□ -1.42
LINC01238-201ENST00000416204 C9JCJ5 164 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 PAGE4O60829 102 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 PYYP10082 97 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 RAB5AP20339 215 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 GCHFRP30047 84 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 TMEM183BQ1AE95 376 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 LINC01556Q5JQF7 62 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 IQCF2Q8IXL9 164 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 TMEM183AQ8IXX5 376 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 CIRBP-AS1Q8TBR5 109 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 BAALCQ8WXS3 180 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
LINC01238-201ENST00000416204 YPEL4Q96NS1 127 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms