RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 DNLZQ5SXM8 178 aa7.17□□□□□ -1.26
SMPD4-203ENST00000412570 C9orf47Q6ZRZ4 202 aa7.17□□□□□ -1.26
SMPD4-203ENST00000412570 MRPL16Q9NX20 251 aaKnown RBP7.17□□□□□ -1.26
SMPD4-203ENST00000412570 TRAV21A0A0B4J279 112 aa7.17□□□□□ -1.26
SMPD4-203ENST00000412570 KLK9Q2XQG4 91 aa7.17□□□□□ -1.26
SMPD4-203ENST00000412570 COA6Q5JTJ3 125 aaKnown RBP7.17□□□□□ -1.26
SMPD4-203ENST00000412570 HTN3P15516 51 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 SPAG8Q99932 426 aaPredicted RBP7.16□□□□□ -1.26
SMPD4-203ENST00000412570 C7orf71A4D174 169 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 BRI3O95415 125 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 DEFB130BP0DP73 79 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 DEFB130AP0DP74 79 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 ASIPP42127 132 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 HBBP68871 147 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 RETNQ9HD89 108 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 SMIM27A0A1W2PRY6 76 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 CRISP2P16562 243 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 PKIAP61925 76 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 CITED1Q99966 193 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 PRO1933Q9H354 126 aa7.16□□□□□ -1.26
SMPD4-203ENST00000412570 NPIPB6E9PJ23 425 aa7.15□□□□□ -1.26
SMPD4-203ENST00000412570 JOSD1Q15040 202 aaPredicted RBP7.15□□□□□ -1.26
SMPD4-203ENST00000412570 RCHY1Q96PM5 261 aa7.15□□□□□ -1.26
SMPD4-203ENST00000412570 IGLV1-51P01701 117 aa7.15□□□□□ -1.26
SMPD4-203ENST00000412570 FOXI2Q6ZQN5 318 aa7.15□□□□□ -1.26
SMPD4-203ENST00000412570 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
SMPD4-203ENST00000412570 ATP6V0BQ99437 205 aa7.15□□□□□ -1.26
SMPD4-203ENST00000412570 SAMD10Q9BYL1 202 aa7.15□□□□□ -1.26
SMPD4-203ENST00000412570 D6R8Y8 96 aa7.15□□□□□ -1.27
SMPD4-203ENST00000412570 LY96Q9Y6Y9 160 aa7.15□□□□□ -1.27
SMPD4-203ENST00000412570 TRGV1A0A0A0MS02 117 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 ZNF876PQ49A33 203 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 TRAV9-1A0A075B6T8 112 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 CKS2P33552 79 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 ZNF56Q15929 161 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 A0A1B0GV90 55 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 P0DMU3 169 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 FAM231CP0DMU5 169 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 HLA-DRB4P13762 266 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 TMEM158Q8WZ71 300 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 HLA-DRB4X5D2U9 266 aa7.14□□□□□ -1.27
SMPD4-203ENST00000412570 SERF1AO75920 110 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 RIGQ13278 110 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 DUSP14O95147 198 aaKnown RBP7.13□□□□□ -1.27
SMPD4-203ENST00000412570 BATFQ16520 125 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 PMCHL2Q9BQD1 86 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 NOP10Q9NPE3 64 aaKnown RBP7.13□□□□□ -1.27
SMPD4-203ENST00000412570 IGHV1OR15-1A0A075B7D0 117 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 A0A096LPF7 62 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 DDTP30046 118 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 TSPOP30536 169 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 FAM231DQ6ZW35 169 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 Q9UF83 564 aa7.13□□□□□ -1.27
SMPD4-203ENST00000412570 GAGE12BA1L429 117 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 CRXO43186 299 aaPredicted RBP7.12□□□□□ -1.27
SMPD4-203ENST00000412570 GAGE7O76087 117 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 GAGE12FP0CL80 117 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 GAGE12GP0CL81 117 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 GAGE12IP0CL82 117 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 C18orf15Q96N68 181 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 SCGB1D1O95968 90 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 SMIM17P0DL12 118 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 LEPP41159 167 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
SMPD4-203ENST00000412570 IGHV3-38A0A0C4DH36 116 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 NUTF2P61970 127 aaKnown RBP7.12□□□□□ -1.27
SMPD4-203ENST00000412570 C9orf66Q5T8R8 295 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 AMTNQ6UX39 209 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 LURAP1LQ8IV03 231 aa7.12□□□□□ -1.27
SMPD4-203ENST00000412570 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
SMPD4-203ENST00000412570 RBAKDNA6NC62 111 aa7.11□□□□□ -1.27
SMPD4-203ENST00000412570 SMIM15Q7Z3B0 74 aa7.11□□□□□ -1.27
SMPD4-203ENST00000412570 ATOH7Q8N100 152 aa7.11□□□□□ -1.27
SMPD4-203ENST00000412570 PRSS3P2Q8NHM4 247 aa7.11□□□□□ -1.27
SMPD4-203ENST00000412570 INSP01308 110 aa7.11□□□□□ -1.27
SMPD4-203ENST00000412570 RNASE3P12724 160 aaKnown RBP7.11□□□□□ -1.27
SMPD4-203ENST00000412570 TCAPO15273 167 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 AMTP48728 403 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 KRTDAPP60985 99 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 ZNF575Q86XF7 245 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 TGP01266 2768 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 TRGV2A0A075B6R0 118 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 KRTAP10-11P60412 298 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 MRPL51Q4U2R6 128 aaKnown RBP7.1□□□□□ -1.27
SMPD4-203ENST00000412570 PHLDA1Q8WV24 401 aaPredicted RBP7.1□□□□□ -1.27
SMPD4-203ENST00000412570 HSBP1O75506 76 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 WDR73Q6P4I2 378 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 Q6ZTI0 123 aa7.1□□□□□ -1.27
SMPD4-203ENST00000412570 ZNF324O75467 553 aaPredicted RBP7.09□□□□□ -1.27
SMPD4-203ENST00000412570 NPYP01303 97 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 IFI27P40305 119 aaPredicted RBP7.09□□□□□ -1.27
SMPD4-203ENST00000412570 MRPL53Q96EL3 112 aaKnown RBP7.09□□□□□ -1.27
SMPD4-203ENST00000412570 C14orf144Q96I85 54 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 PRELID3AQ96N28 172 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 KLLNB2CW77 178 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 HLA-DQA1P01909 254 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 COX19Q49B96 90 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 C1orf158Q8N1D5 194 aa7.09□□□□□ -1.27
SMPD4-203ENST00000412570 MT-ND6P03923 174 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms