RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 ZNF345Q14585 488 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 FAM122CQ6P4D5 195 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 PQLC2Q6ZP29 291 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 KCNRGQ8N5I3 272 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 CIRBP-AS1Q8TBR5 109 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 SUN5Q8TC36 379 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 RAB24Q969Q5 203 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 ZNF479Q96JC4 524 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 SPXQ9BT56 116 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 SH3BGRL3Q9H299 93 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 TP53TG3Q9ULZ0 132 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.78
HMGN1P20-201ENST00000411849 TRAV8-3A0A0A6YYJ7 113 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 A0A0D9SG52 128 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 PGPA6NDG6 321 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 RBFOX3A6NFN3 312 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 DIRC3C9JPN6 131 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 LECT2O14960 151 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 IGLV2-11P01706 119 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 IGHV3-30P01768 117 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 IGHV3-33P01772 117 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 PFN1P07737 140 aaKnown RBP3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 ARL14EPLP0DKL9 152 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 IGHV3-30-3P0DP02 117 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 IGHV3-30-5P0DP03 117 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 RPL37AP61513 92 aaKnown RBP3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 UBE2L3P68036 154 aaKnown RBP3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 WFDC2Q14508 124 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 ZNF726P1Q15940 193 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 LINC01620Q4KN68 170 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 TMEM78Q5T7P6 136 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 ARL6IP6Q8N6S5 226 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 Q8N976 141 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 OR4C5Q8NGB2 326 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 RASL10AQ92737 203 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 ACTR3CQ9C0K3 210 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 OTORQ9NRC9 128 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 ZNF492Q9P255 531 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 COX11Q9Y6N1 276 aa3.95□□□□□ -1.78
HMGN1P20-201ENST00000411849 IGKV2-40A0A087WW87 121 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 TRAV4A0A0B4J268 109 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 TRBV7-9A0A0J9YWB2 115 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 CTXND1A0A1B0GTU2 59 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 RBAKDNA6NC62 111 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 CXorf1O96002 111 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 IGKV2D-40P01614 121 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 GCHFRP30047 84 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 CSN1S1P47710 185 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 ZNF138P52744 262 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 LGALSLQ3ZCW2 172 aaPredicted RBP3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 TOR2AQ5JU69 321 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 TMUB2Q71RG4 321 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 TCTE3Q8IZS6 198 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 ZFAND2AQ8N6M9 145 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 ATP6V0E2Q8NHE4 81 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 RMI2Q96E14 147 aa3.94□□□□□ -1.78
HMGN1P20-201ENST00000411849 TRGV11A0A075B6L2 103 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 LOC100131303A0A0U1RQF7 123 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 BCL2L11O43521 198 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 SEC11BP0C7V7 166 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 MT1HL1P0DM35 61 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 SUMO1P63165 101 aaKnown RBP3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 FAM74A1Q5RGS3 127 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 AKR1C8PQ5T2L2 129 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 PRR9Q5T870 116 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 LELP1Q5T871 98 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 FAM159AQ6UWV7 190 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 Q6ZQT7 251 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 TMED6Q8WW62 240 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 HYLS1Q96M11 299 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 PRADC1Q9BSG0 188 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 TMEM167BQ9NRX6 74 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 LENEPQ9Y5L5 61 aa3.93□□□□□ -1.78
HMGN1P20-201ENST00000411849 TRAV8-1A0A0A6YYK1 113 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 KANTRA0A1W2PQU2 76 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 A0A1W2PRE2 83 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 FBLL1A6NHQ2 334 aaKnown RBP3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 GGTLC3B5MD39 225 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 EIF4EBP3O60516 100 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 TCRAP04437 139 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 GATA1P15976 413 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 ASIPP42127 132 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 FHITP49789 147 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 FGF8P55075 233 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 TMEM183BQ1AE95 376 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 MUC21Q5SSG8 566 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 Q6ZRU5 148 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 TMEM183AQ8IXX5 376 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 C5orf17Q8NAS9 161 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 Q8TAT8 98 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 CMTM2Q8TAZ6 248 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 MBD3L1Q8WWY6 194 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 BAALCQ8WXS3 180 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 DAZAP1Q96EP5 407 aaKnown RBP3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 TVP23CQ96ET8 276 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 ZNF471Q9BX82 626 aaPredicted RBP3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 GTSF1LQ9H1H1 148 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 EPDR1Q9UM22 224 aa3.92□□□□□ -1.78
HMGN1P20-201ENST00000411849 IGHV3-16A0A0C4DH30 117 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms