RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SLAQ13239 276 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 Q1RN00 199 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 Q6AWC8 147 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 C20orf173Q96LM9 149 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 CSTL1Q9H114 145 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 HIVEP1P15822 2718 aa8.64□□□□□ -1.03
SNX13-202ENST00000409604 MYCNOSP40205 109 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 IFI27P40305 119 aaPredicted RBP8.63□□□□□ -1.03
SNX13-202ENST00000409604 CLPSL2Q6UWE3 100 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 TMEM86BQ8N661 226 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 ZNRF2Q8NHG8 242 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 C14orf144Q96I85 54 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 LINC00614P0C842 121 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX13-202ENST00000409604 IGF2BP2-AS1Q96M15 143 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 ATP6V0BQ99437 205 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 FBLL1A6NHQ2 334 aaKnown RBP8.63□□□□□ -1.03
SNX13-202ENST00000409604 ZNF80P51504 273 aaPredicted RBP8.63□□□□□ -1.03
SNX13-202ENST00000409604 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
SNX13-202ENST00000409604 MDFICQ9P1T7 246 aa8.63□□□□□ -1.03
SNX13-202ENST00000409604 DEFB114Q30KQ6 69 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 FOXI2Q6ZQN5 318 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 ZFAND3Q9H8U3 227 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 TP53TG3Q9ULZ0 132 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 TRAV13-1A0A0B4J241 112 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 IFITM10A6NMD0 228 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 COTL1Q14019 142 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 TRBV9A0A0B4J1U6 114 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 UBE2DNLQ8IWF7 75 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 Q8N1Y9 231 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 OR11H2Q8NH07 326 aa8.62□□□□□ -1.03
SNX13-202ENST00000409604 INS-IGF2F8WCM5 200 aa8.61□□□□□ -1.03
SNX13-202ENST00000409604 DPH3P1Q9H4G8 78 aa8.61□□□□□ -1.03
SNX13-202ENST00000409604 MAP6D1Q9H9H5 199 aa8.61□□□□□ -1.03
SNX13-202ENST00000409604 SMAD5-AS1Q9Y6J3 95 aa8.61□□□□□ -1.03
SNX13-202ENST00000409604 PLP1P60201 277 aa8.61□□□□□ -1.03
SNX13-202ENST00000409604 CMC4P56277 68 aaPredicted RBP8.61□□□□□ -1.03
SNX13-202ENST00000409604 TRBV24-1A0A075B6N3 115 aa8.61□□□□□ -1.03
SNX13-202ENST00000409604 RPL36AP83881 106 aaKnown RBP8.61□□□□□ -1.03
SNX13-202ENST00000409604 RPL36ALQ969Q0 106 aaKnown RBP8.61□□□□□ -1.03
SNX13-202ENST00000409604 CACNG7P62955 275 aa8.6□□□□□ -1.03
SNX13-202ENST00000409604 LTAP01374 205 aa8.6□□□□□ -1.03
SNX13-202ENST00000409604 APOC4P55056 127 aa8.59□□□□□ -1.03
SNX13-202ENST00000409604 C11orf52Q96A22 123 aa8.59□□□□□ -1.03
SNX13-202ENST00000409604 POLR3KQ9Y2Y1 108 aaPredicted RBP8.59□□□□□ -1.03
SNX13-202ENST00000409604 LOC102724200A0A096LPH7 203 aaPredicted RBP8.59□□□□□ -1.03
SNX13-202ENST00000409604 GNB1LQ9BYB4 327 aa8.59□□□□□ -1.03
SNX13-202ENST00000409604 VCX2Q9H322 139 aa8.59□□□□□ -1.03
SNX13-202ENST00000409604 K7EMT4 169 aa8.59□□□□□ -1.03
SNX13-202ENST00000409604 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
SNX13-202ENST00000409604 TNFRSF6BO95407 300 aa8.58□□□□□ -1.04
SNX13-202ENST00000409604 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
SNX13-202ENST00000409604 PRADC1Q9BSG0 188 aa8.58□□□□□ -1.04
SNX13-202ENST00000409604 TMEM70Q9BUB7 260 aa8.58□□□□□ -1.04
SNX13-202ENST00000409604 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.58□□□□□ -1.04
SNX13-202ENST00000409604 MRGPRG-AS1Q2M3A8 158 aa8.58□□□□□ -1.04
SNX13-202ENST00000409604 A0A0J9YX75 114 aa8.58□□□□□ -1.04
SNX13-202ENST00000409604 MRPL51Q4U2R6 128 aaKnown RBP8.57□□□□□ -1.04
SNX13-202ENST00000409604 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 OR2K2Q8NGT1 345 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 LYPD6BQ8NI32 183 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 RPL39LQ96EH5 51 aaKnown RBP8.57□□□□□ -1.04
SNX13-202ENST00000409604 NPYP01303 97 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 GAGE6Q13070 117 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 SPATA45Q537H7 98 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 SDHAF1A6NFY7 115 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 SFTA2Q6UW10 78 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 NDUFA11Q86Y39 141 aa8.57□□□□□ -1.04
SNX13-202ENST00000409604 HERVK_113P61574 105 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 GTSF1Q8WW33 167 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 TMEM242Q9NWH2 141 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 KLF12Q9Y4X4 402 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 F8W735 103 aaPredicted RBP8.56□□□□□ -1.04
SNX13-202ENST00000409604 ZNF625Q96I27 306 aaPredicted RBP8.56□□□□□ -1.04
SNX13-202ENST00000409604 CYSLTR1Q9Y271 337 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 K7EQG2 157 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 ZNF25P17030 456 aaPredicted RBP8.56□□□□□ -1.04
SNX13-202ENST00000409604 KLF5Q13887 457 aaPredicted RBP8.56□□□□□ -1.04
SNX13-202ENST00000409604 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
SNX13-202ENST00000409604 FBN2P35556 2912 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 ADARB2-AS1A8MUL3 147 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 NPC2P61916 151 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 TMEM97Q5BJF2 176 aa8.56□□□□□ -1.04
SNX13-202ENST00000409604 HINT1P49773 126 aaPredicted RBP8.55□□□□□ -1.04
SNX13-202ENST00000409604 FAM104BQ5XKR9 115 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 MIEN1Q9BRT3 115 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 LY96Q9Y6Y9 160 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 HBDP02042 147 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 TYMSP04818 313 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 P0DMU3 169 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 FAM231AP0DMU4 169 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 FAM231CP0DMU5 169 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 RAB37Q96AX2 223 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 ZMAT4Q9H898 229 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 A8MWP6 167 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 PPP1R17O96001 155 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 SCGB1C2P0DMR2 95 aa8.55□□□□□ -1.04
SNX13-202ENST00000409604 ERASQ7Z444 233 aa8.54□□□□□ -1.04
SNX13-202ENST00000409604 IFI27L1Q96BM0 104 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms