RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 INSP01308 110 aa13.78□□□□□ -0.2
SMPD4-202ENST00000409031 HAMPP81172 84 aa13.78□□□□□ -0.2
SMPD4-202ENST00000409031 Q6ZS92 163 aa13.78□□□□□ -0.2
SMPD4-202ENST00000409031 UBE2E1P51965 193 aa13.78□□□□□ -0.2
SMPD4-202ENST00000409031 RPL32P62910 135 aaKnown RBP13.78□□□□□ -0.2
SMPD4-202ENST00000409031 TIMM17AQ99595 171 aa13.78□□□□□ -0.2
SMPD4-202ENST00000409031 H3BUX3 64 aa13.77□□□□□ -0.2
SMPD4-202ENST00000409031 Q71RC1 249 aaPredicted RBP13.77□□□□□ -0.21
SMPD4-202ENST00000409031 IGKV1D-37A0A075B6S9 117 aa13.77□□□□□ -0.21
SMPD4-202ENST00000409031 A0A1B0GX51 115 aa13.77□□□□□ -0.21
SMPD4-202ENST00000409031 C11orf86A6NJI1 115 aa13.76□□□□□ -0.21
SMPD4-202ENST00000409031 GNRH2O43555 120 aa13.76□□□□□ -0.21
SMPD4-202ENST00000409031 MRPL23Q16540 153 aaKnown RBP13.76□□□□□ -0.21
SMPD4-202ENST00000409031 KLK9Q9UKQ9 250 aa13.76□□□□□ -0.21
SMPD4-202ENST00000409031 A0A0J9YXV3 536 aa13.76□□□□□ -0.21
SMPD4-202ENST00000409031 Q8N1Y9 231 aa13.76□□□□□ -0.21
SMPD4-202ENST00000409031 EIF4EBP1Q13541 118 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-202ENST00000409031 CLUHP3Q96NS8 147 aa13.75□□□□□ -0.21
SMPD4-202ENST00000409031 RS1O15537 224 aa13.75□□□□□ -0.21
SMPD4-202ENST00000409031 MSRB2Q9Y3D2 182 aa13.75□□□□□ -0.21
SMPD4-202ENST00000409031 WI2-2373I1.2A0A1W2PRP0 233 aa13.75□□□□□ -0.21
SMPD4-202ENST00000409031 E7EUB6 86 aa13.75□□□□□ -0.21
SMPD4-202ENST00000409031 TMEM258P61165 79 aa13.75□□□□□ -0.21
SMPD4-202ENST00000409031 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
SMPD4-202ENST00000409031 IGHV3-53P01767 116 aa13.74□□□□□ -0.21
SMPD4-202ENST00000409031 LINC00643Q86TS7 51 aa13.74□□□□□ -0.21
SMPD4-202ENST00000409031 RBM3P98179 157 aaKnown RBP13.74□□□□□ -0.21
SMPD4-202ENST00000409031 COL4A4P53420 1690 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-202ENST00000409031 TINCRA0A1B0GVN0 87 aa13.74□□□□□ -0.21
SMPD4-202ENST00000409031 COL6A6A6NMZ7 2263 aa13.74□□□□□ -0.21
SMPD4-202ENST00000409031 CMC4P56277 68 aaPredicted RBP13.74□□□□□ -0.21
SMPD4-202ENST00000409031 IGLV11-55A0A075B6I3 123 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 PFN2P35080 140 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 UFSP1Q6NVU6 142 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 Q9H8V8 135 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 C1orf43Q9BWL3 253 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 IGKV2D-26A0A0A0MRZ7 120 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 IGLV2-23P01705 113 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 SS18Q15532 418 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 IGFBPL1Q8WX77 278 aa13.73□□□□□ -0.21
SMPD4-202ENST00000409031 LY6HO94772 140 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 PCNX3Q9H6A9 2034 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 PCNX2A6NKB5 2137 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 NUP210Q8TEM1 1887 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-202ENST00000409031 CTSZQ9UBR2 303 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 BUB3O43684 328 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 DEFB131AP59861 70 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 PLXNB1O43157 2135 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 CTSGP08311 255 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 SUMO4Q6EEV6 95 aa13.72□□□□□ -0.21
SMPD4-202ENST00000409031 BRD3OSQ6XYD6 125 aa13.71□□□□□ -0.21
SMPD4-202ENST00000409031 H0YGX0 51 aa13.71□□□□□ -0.22
SMPD4-202ENST00000409031 LGALS9O00182 355 aa13.7□□□□□ -0.22
SMPD4-202ENST00000409031 TRAV12-2A0A075B6T6 113 aa13.7□□□□□ -0.22
SMPD4-202ENST00000409031 RNASE13Q5GAN3 156 aaKnown RBP13.7□□□□□ -0.22
SMPD4-202ENST00000409031 TEX22C9J3V5 150 aa13.7□□□□□ -0.22
SMPD4-202ENST00000409031 RITA1Q96K30 269 aa13.7□□□□□ -0.22
SMPD4-202ENST00000409031 UQCRQO14949 82 aa13.7□□□□□ -0.22
SMPD4-202ENST00000409031 SPRY2O43597 315 aa13.7□□□□□ -0.22
SMPD4-202ENST00000409031 ZNRF2Q8NHG8 242 aa13.7□□□□□ -0.22
SMPD4-202ENST00000409031 ADAMTS9Q9P2N4 1935 aa13.7□□□□□ -0.22
SMPD4-202ENST00000409031 IGLC6P0CF74 106 aa13.69□□□□□ -0.22
SMPD4-202ENST00000409031 MED14OSP0DP75 135 aa13.69□□□□□ -0.22
SMPD4-202ENST00000409031 SPRNQ5BIV9 151 aa13.69□□□□□ -0.22
SMPD4-202ENST00000409031 TMEM243Q9BU79 118 aa13.69□□□□□ -0.22
SMPD4-202ENST00000409031 IGHV3-38A0A0C4DH36 116 aa13.69□□□□□ -0.22
SMPD4-202ENST00000409031 ORMDL1Q9P0S3 153 aa13.69□□□□□ -0.22
SMPD4-202ENST00000409031 RPL39P62891 51 aaKnown RBP13.69□□□□□ -0.22
SMPD4-202ENST00000409031 C9orf47Q6ZRZ4 202 aa13.69□□□□□ -0.22
SMPD4-202ENST00000409031 IGHV7-4-1A0A0J9YVY3 117 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 PRAC2D3DTV9 90 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 DSCAML1Q8TD84 2053 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 IGHV3-16A0A0C4DH30 117 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 CRLF1O75462 422 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 CGB3P0DN86 165 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 CGB7P0DN87 165 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 NPBQ8NG41 125 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 DYSFO75923 2080 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 U3KQK5 164 aa13.68□□□□□ -0.22
SMPD4-202ENST00000409031 F6UB75 175 aa13.67□□□□□ -0.22
SMPD4-202ENST00000409031 MYCNOSP40205 109 aa13.67□□□□□ -0.22
SMPD4-202ENST00000409031 MAPKAPK5-AS1Q8N8E1 139 aa13.67□□□□□ -0.22
SMPD4-202ENST00000409031 DSCR8Q96T75 97 aa13.67□□□□□ -0.22
SMPD4-202ENST00000409031 IGKV3D-7A0A0C4DH55 119 aa13.67□□□□□ -0.22
SMPD4-202ENST00000409031 MRAPQ8TCY5 172 aa13.67□□□□□ -0.22
SMPD4-202ENST00000409031 CFAP126Q5VTH2 177 aa13.66□□□□□ -0.22
SMPD4-202ENST00000409031 COX6B1P14854 86 aa13.66□□□□□ -0.22
SMPD4-202ENST00000409031 SLC25A29Q8N8R3 303 aa13.66□□□□□ -0.22
SMPD4-202ENST00000409031 PRSS33Q8NF86 280 aa13.66□□□□□ -0.22
SMPD4-202ENST00000409031 UBE2E2Q96LR5 201 aa13.66□□□□□ -0.22
SMPD4-202ENST00000409031 C5orf47Q569G3 176 aa13.65□□□□□ -0.22
SMPD4-202ENST00000409031 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
SMPD4-202ENST00000409031 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
SMPD4-202ENST00000409031 Q8N7P7 452 aa13.65□□□□□ -0.22
SMPD4-202ENST00000409031 PF4P02776 101 aa13.65□□□□□ -0.22
SMPD4-202ENST00000409031 IGHV1-69P01742 117 aa13.64□□□□□ -0.23
SMPD4-202ENST00000409031 TEX49A0A1B0GTD5 131 aa13.64□□□□□ -0.23
SMPD4-202ENST00000409031 FAM215AQ9Y5M1 114 aa13.64□□□□□ -0.23
SMPD4-202ENST00000409031 KIF26AQ9ULI4 1882 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 266.8 ms