RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 IGHV3-64A0A075B6Q5 118 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 FGF6P10767 208 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 FAM159AQ6UWV7 190 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 U3KQK5 164 aa9.67□□□□□ -0.86
PPP4R1-202ENST00000400555 TRAV21A0A0B4J279 112 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 IGHV1-69DA0A0B4J2H0 117 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 IGHV1-69P01742 117 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 PIMREGQ9BSJ6 248 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 DOPEY1Q5JWR5 2465 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 LOC107984156A0A0G2JMH3 177 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 C10orf99Q6UWK7 81 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 ARL17AQ8IVW1 177 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 MAPKAPK5-AS1Q8N8E1 139 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 APOMO95445 188 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 PSMG4Q5JS54 123 aa9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 CHTOPQ9Y3Y2 248 aaKnown RBP9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 PRRC2AP48634 2157 aaKnown RBP9.66□□□□□ -0.86
PPP4R1-202ENST00000400555 H3BRM9 83 aa9.65□□□□□ -0.86
PPP4R1-202ENST00000400555 H7C2G1 150 aa9.65□□□□□ -0.86
PPP4R1-202ENST00000400555 EBI3Q14213 229 aa9.65□□□□□ -0.86
PPP4R1-202ENST00000400555 ZNF48Q96MX3 618 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-202ENST00000400555 TMEM170BQ5T4T1 132 aa9.65□□□□□ -0.86
PPP4R1-202ENST00000400555 SUMO2P61956 95 aaKnown RBP9.65□□□□□ -0.87
PPP4R1-202ENST00000400555 IGHV4-30-2A0A087WSY4 118 aa9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 ZNF56Q15929 161 aa9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 KLK9Q9UKQ9 250 aa9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 C9orf139Q6ZV77 190 aa9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 C2orf66Q6UXQ4 117 aa9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 ITLN2Q8WWU7 325 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 SMIM2Q9BVW6 85 aa9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 CELSR2Q9HCU4 2923 aa9.64□□□□□ -0.87
PPP4R1-202ENST00000400555 A0A1W2PPM0 123 aa9.63□□□□□ -0.87
PPP4R1-202ENST00000400555 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
PPP4R1-202ENST00000400555 FN1P02751 2386 aaKnown RBP9.63□□□□□ -0.87
PPP4R1-202ENST00000400555 ADAMTSL5Q6ZMM2 481 aa9.62□□□□□ -0.87
PPP4R1-202ENST00000400555 AJUBAQ96IF1 538 aa9.62□□□□□ -0.87
PPP4R1-202ENST00000400555 ZNF815PA8K554 130 aa9.62□□□□□ -0.87
PPP4R1-202ENST00000400555 CDKN1BP46527 198 aa9.62□□□□□ -0.87
PPP4R1-202ENST00000400555 ZNF479Q96JC4 524 aa9.62□□□□□ -0.87
PPP4R1-202ENST00000400555 DPH3P1Q9H4G8 78 aa9.62□□□□□ -0.87
PPP4R1-202ENST00000400555 H3BMG7 143 aa9.62□□□□□ -0.87
PPP4R1-202ENST00000400555 HHLA3Q9XRX5 114 aa9.62□□□□□ -0.87
PPP4R1-202ENST00000400555 K7EP34 96 aa9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 RPL39P62891 51 aaKnown RBP9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 SPINK13Q1W4C9 94 aa9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 SPOCK3Q9BQ16 436 aa9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 SLC25A16P16260 332 aa9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 ZNF575Q86XF7 245 aa9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 C11orf44Q8N8P7 122 aa9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 NRACQ8N912 160 aa9.61□□□□□ -0.87
PPP4R1-202ENST00000400555 IGHV4-59P01825 116 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 SYNJ2BPP57105 145 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 GATD1Q8NB37 220 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 HIVEP2P31629 2446 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 H7C1H1 209 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 OVOL1O14753 267 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 ZNF418Q8TF45 676 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 PRSS29PA6NIE9 313 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 KNCNA6PVL3 124 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 TP53TG1Q9Y2A0 90 aa9.6□□□□□ -0.87
PPP4R1-202ENST00000400555 A0A087WX48 190 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 RBAKDNA6NC62 111 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 FAM223BA6NKX1 122 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 ETDBQ3ZM63 59 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 FAM223AQ8IWN6 122 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 ZFAND2AQ8N6M9 145 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 RASL10AQ92737 203 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 DUX3Q96PT4 197 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 SCGB1C2P0DMR2 95 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 ORMDL2Q53FV1 153 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 OPRPNQ99935 248 aaPredicted RBP9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 PRADC1Q9BSG0 188 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 PRM2P04554 102 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 ID1P41134 155 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 CEND1Q8N111 149 aa9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 DAZ1Q9NQZ3 744 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-202ENST00000400555 KIR2DL4Q99706 377 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 IGHV3OR16-12A0A075B7B8 117 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 TEX48A0A1B0GUV7 120 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 F8VRH5 84 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 HLA-DRB4P13762 266 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 WFDC2Q14508 124 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 GTSF1LQ9H1H1 148 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 HLA-DRB4X5D2U9 266 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 NDUFA4O00483 81 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 AVPP01185 164 aa9.58□□□□□ -0.88
PPP4R1-202ENST00000400555 DEFB136Q30KP8 78 aa9.57□□□□□ -0.88
PPP4R1-202ENST00000400555 PIFOQ8TCI5 191 aa9.57□□□□□ -0.88
PPP4R1-202ENST00000400555 SMPXQ9UHP9 88 aa9.57□□□□□ -0.88
PPP4R1-202ENST00000400555 IGSF10Q6WRI0 2623 aa9.57□□□□□ -0.88
PPP4R1-202ENST00000400555 MSMBP08118 114 aa9.57□□□□□ -0.88
PPP4R1-202ENST00000400555 RNASE13Q5GAN3 156 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms