RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 C16orf74Q96GX8 76 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 PRR20EP86478 221 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 PRR20CP86479 221 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 PRR20DP86480 221 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 PRR20BP86481 221 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 PRR20AP86496 221 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 IGLC1P0CG04 106 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 CLPSL2Q6UWE3 100 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 PNRC2Q9NPJ4 139 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 ZNF106Q9H2Y7 1883 aaKnown RBP6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 IGLV3-25P01717 112 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 ADAMTSL3P82987 1691 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 C16orf54Q6UWD8 224 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 ZNF491Q8N8L2 437 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 NLRC5Q86WI3 1866 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 IGHV1OR15-9A0A0B4J2B8 117 aa6.87□□□□□ -1.31
CACNA1C-220ENST00000399655 C5orf24Q7Z6I8 188 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 LENEPQ9Y5L5 61 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 DEFB131AP59861 70 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 Q9HAA7 133 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 LRP4O75096 1905 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 LINC01356Q8N9X3 169 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 KLHDC9Q8NEP7 349 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 SPINK13Q1W4C9 94 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 IGLL1P15814 213 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 C1QL2Q7Z5L3 287 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 CRYBA2P53672 197 aa6.86□□□□□ -1.31
CACNA1C-220ENST00000399655 NCOR2Q9Y618 2525 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 MBD3L4A6NDZ8 208 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 MBD3L3A6NE82 208 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 MBD3L5A6NJ08 208 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 MBD3L2Q8NHZ7 208 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 TMEM14BQ9NUH8 114 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 XCL2Q9UBD3 114 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 RPL34P49207 117 aaKnown RBP6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 TRBV7-3A0A075B6L6 115 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 IGHV1-3A0A0C4DH29 117 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 IGHV1-18A0A0C4DH31 117 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 Q8N976 141 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 TMEM14CQ9P0S9 112 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 CFHR3Q02985 330 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 PIK3CD-AS1Q5SR53 167 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 Q6P435 159 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 PAQR4Q8N4S7 273 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 TNFRSF12AQ9NP84 129 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 SPAG11AQ6PDA7 123 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 TMEM14EPQ6UXP3 125 aa6.85□□□□□ -1.31
CACNA1C-220ENST00000399655 RBAKDNA6NC62 111 aa6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 TIAF1O95411 115 aa6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 CTHRC1Q96CG8 243 aa6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 M0QXV9 152 aa6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 UBE2D3P61077 147 aa6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 MRPS18CQ9Y3D5 142 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 TRBV7-6A0A0J9YX20 115 aa6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 LINC01560Q8TB33 94 aa6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 ZNF501Q96CX3 271 aaPredicted RBP6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
CACNA1C-220ENST00000399655 H3BUX3 64 aa6.84□□□□□ -1.32
CACNA1C-220ENST00000399655 EFNA2O43921 213 aa6.84□□□□□ -1.32
CACNA1C-220ENST00000399655 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 SRSF3P84103 164 aaKnown RBP6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 EIF4EBP2Q13542 120 aaPredicted RBP6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 K7EQD1 137 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 SDIM1Q6ZPB5 146 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 CTRLP40313 264 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 Q5BKY6 102 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 RPP25LQ8N5L8 163 aaKnown RBP6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 P0DMU3 169 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 FAM231AP0DMU4 169 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 FAM231CP0DMU5 169 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 MED14OSP0DP75 135 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 MST1P26927 711 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 ESM1Q9NQ30 184 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 IGHV4-38-2P0DP08 117 aa6.83□□□□□ -1.32
CACNA1C-220ENST00000399655 IGLC6P0CF74 106 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 ENHOQ6UWT2 76 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 PIFOQ8TCI5 191 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 EFNA4P52798 201 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 UNQ6494/PRO21346Q6UXR6 183 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 DEFB104AQ8WTQ1 72 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 UFSP1Q6NVU6 142 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 RFLNBQ8N5W9 214 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 IGHV7-4-1A0A0J9YVY3 117 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 A0A1B0GUS0 222 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 BUB1B-PAK6H3BSN5 160 aa6.82□□□□□ -1.32
CACNA1C-220ENST00000399655 AJUBAQ96IF1 538 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 IGHV4-30-2A0A087WSY4 118 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 COX7CP15954 63 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 PTPRSQ13332 1948 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 MIFP14174 115 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 LINC00479Q96M42 142 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 PAPPA2Q9BXP8 1791 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms