RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 TMEM189A5PLL7 270 aa11.47□□□□□ -0.57
COL25A1-201ENST00000399126 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
COL25A1-201ENST00000399126 DUX3Q96PT4 197 aa11.47□□□□□ -0.57
COL25A1-201ENST00000399126 SLC50A1Q9BRV3 221 aa11.47□□□□□ -0.57
COL25A1-201ENST00000399126 ZNF492Q9P255 531 aa11.47□□□□□ -0.57
COL25A1-201ENST00000399126 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
COL25A1-201ENST00000399126 FAM106AQ4KMX7 169 aa11.46□□□□□ -0.57
COL25A1-201ENST00000399126 C11orf44Q8N8P7 122 aa11.46□□□□□ -0.57
COL25A1-201ENST00000399126 NUP35Q8NFH5 326 aa11.46□□□□□ -0.57
COL25A1-201ENST00000399126 GTSF1Q8WW33 167 aa11.46□□□□□ -0.57
COL25A1-201ENST00000399126 C16orf92Q96LL3 132 aa11.46□□□□□ -0.57
COL25A1-201ENST00000399126 UBE2E2Q96LR5 201 aa11.46□□□□□ -0.57
COL25A1-201ENST00000399126 HIGD1CA8MV81 97 aa11.46□□□□□ -0.58
COL25A1-201ENST00000399126 HIST1H1AQ02539 215 aaPredicted RBP11.46□□□□□ -0.58
COL25A1-201ENST00000399126 FN1P02751 2386 aaKnown RBP11.46□□□□□ -0.58
COL25A1-201ENST00000399126 C9orf118A6NHY6 69 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 LY6G6DO95868 133 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 SLC25A34Q6PIV7 304 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 OR2K2Q8NGT1 345 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 PRR25Q96S07 402 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 SOCS3O14543 225 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 HOXD3P31249 432 aaPredicted RBP11.45□□□□□ -0.58
COL25A1-201ENST00000399126 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
COL25A1-201ENST00000399126 SEC11AP67812 179 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 MRAPQ8TCY5 172 aa11.45□□□□□ -0.58
COL25A1-201ENST00000399126 SNURFLB1AK76 121 aa11.44□□□□□ -0.58
COL25A1-201ENST00000399126 NPIPB6E9PJ23 425 aa11.44□□□□□ -0.58
COL25A1-201ENST00000399126 IZUMO1RA6ND01 250 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 SLURP1P55000 103 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 FA2HQ7L5A8 372 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 ZNF418Q8TF45 676 aaPredicted RBP11.43□□□□□ -0.58
COL25A1-201ENST00000399126 AGPAT4-IT1Q9H0P7 198 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
COL25A1-201ENST00000399126 GAGE5Q13069 117 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 GAGE6Q13070 117 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 TMSB15BA0A087X1C1 80 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 H3BRM9 83 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 K7EMT4 169 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 GDF5OSQ5U4N7 250 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 FOXI2Q6ZQN5 318 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 PGLYRP4Q96LB8 373 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 NAT8BQ9UHF3 227 aa11.43□□□□□ -0.58
COL25A1-201ENST00000399126 F6UB75 175 aa11.42□□□□□ -0.58
COL25A1-201ENST00000399126 ERG28Q9UKR5 140 aa11.42□□□□□ -0.58
COL25A1-201ENST00000399126 SH2D1AO60880 128 aa11.42□□□□□ -0.58
COL25A1-201ENST00000399126 Q6ZQT7 251 aa11.42□□□□□ -0.58
COL25A1-201ENST00000399126 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
COL25A1-201ENST00000399126 C2CD3Q4AC94 2353 aa11.41□□□□□ -0.58
COL25A1-201ENST00000399126 A8MWL6 223 aa11.41□□□□□ -0.58
COL25A1-201ENST00000399126 CT45A10P0DMU9 189 aa11.41□□□□□ -0.58
COL25A1-201ENST00000399126 OR10AG1Q8NH19 301 aa11.41□□□□□ -0.58
COL25A1-201ENST00000399126 AGRNO00468 2067 aa11.41□□□□□ -0.58
COL25A1-201ENST00000399126 DGAT2L7PQ6IED9 249 aa11.41□□□□□ -0.58
COL25A1-201ENST00000399126 KIR2DL5BQ8NHK3 375 aa11.41□□□□□ -0.58
COL25A1-201ENST00000399126 RCHY1Q96PM5 261 aa11.41□□□□□ -0.58
COL25A1-201ENST00000399126 RNASE1P07998 156 aaKnown RBP11.4□□□□□ -0.58
COL25A1-201ENST00000399126 NTF3P20783 257 aa11.4□□□□□ -0.58
COL25A1-201ENST00000399126 KLHL30-AS1Q8NEE0 82 aa11.4□□□□□ -0.58
COL25A1-201ENST00000399126 RNF183Q96D59 192 aa11.4□□□□□ -0.58
COL25A1-201ENST00000399126 TP73-AS1Q9UF72 201 aa11.4□□□□□ -0.58
COL25A1-201ENST00000399126 H3BUT2 72 aa11.4□□□□□ -0.59
COL25A1-201ENST00000399126 ADAMTSL5Q6ZMM2 481 aa11.4□□□□□ -0.59
COL25A1-201ENST00000399126 WIPF2Q8TF74 440 aaPredicted RBP11.4□□□□□ -0.59
COL25A1-201ENST00000399126 A6NDN8 102 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 FAM162BQ5T6X4 162 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 MRPL53Q96EL3 112 aaKnown RBP11.39□□□□□ -0.59
COL25A1-201ENST00000399126 GNB1LQ9BYB4 327 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 SPCS1Q9Y6A9 102 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 HAX1O00165 279 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 MT-ND6P03923 174 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 CD28P10747 220 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
COL25A1-201ENST00000399126 FAM19A2Q8N3H0 131 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 LINC01006Q8NI28 216 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 DCANP1Q8TF63 244 aa11.39□□□□□ -0.59
COL25A1-201ENST00000399126 C2orf70A6NJV1 201 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 INAFM1C9JVW0 142 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 HILS1P60008 231 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 TMEM78Q5T7P6 136 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 COX8CQ7Z4L0 72 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 ZNF575Q86XF7 245 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 JMJD1CQ15652 2540 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 PRR9Q5T870 116 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 C4orf3Q8WVX3 66 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 F8P00451 2351 aa11.38□□□□□ -0.59
COL25A1-201ENST00000399126 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 ZNF138P52744 262 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 C9orf47Q6ZRZ4 202 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 C18orf32Q8TCD1 76 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 SPAG8Q99932 426 aaPredicted RBP11.37□□□□□ -0.59
COL25A1-201ENST00000399126 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 TENM1Q9UKZ4 2725 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 LINC01619G3V211 115 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 LGALS9O00182 355 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 SPATA12Q7Z6I5 190 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 NDFIP1Q9BT67 221 aa11.37□□□□□ -0.59
COL25A1-201ENST00000399126 HSPB8Q9UJY1 196 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms