RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 C21orf62Q9NYP8 219 aa11.59□□□□□ -0.55
CYLD-202ENST00000398568 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
CYLD-202ENST00000398568 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.56
CYLD-202ENST00000398568 IGFL4Q6B9Z1 124 aa11.58□□□□□ -0.56
CYLD-202ENST00000398568 SPXQ9BT56 116 aa11.58□□□□□ -0.56
CYLD-202ENST00000398568 TEX22C9J3V5 150 aa11.58□□□□□ -0.56
CYLD-202ENST00000398568 LINC00311Q8N616 119 aa11.58□□□□□ -0.56
CYLD-202ENST00000398568 DNAJC30Q96LL9 226 aa11.58□□□□□ -0.56
CYLD-202ENST00000398568 PAPPA-AS1Q5QFB9 102 aa11.57□□□□□ -0.56
CYLD-202ENST00000398568 HIVEP3Q5T1R4 2406 aa11.57□□□□□ -0.56
CYLD-202ENST00000398568 TIMM23O14925 209 aa11.57□□□□□ -0.56
CYLD-202ENST00000398568 DUSP14O95147 198 aaKnown RBP11.57□□□□□ -0.56
CYLD-202ENST00000398568 GLRXP35754 106 aa11.57□□□□□ -0.56
CYLD-202ENST00000398568 ERCC8Q13216 396 aa11.57□□□□□ -0.56
CYLD-202ENST00000398568 C3orf36Q3SXR2 165 aa11.57□□□□□ -0.56
CYLD-202ENST00000398568 C2orf66Q6UXQ4 117 aa11.57□□□□□ -0.56
CYLD-202ENST00000398568 IL17RELQ6ZVW7 336 aa11.57□□□□□ -0.56
CYLD-202ENST00000398568 RPL13AP40429 203 aaKnown RBP11.57□□□□□ -0.56
CYLD-202ENST00000398568 BEX4Q9NWD9 120 aaPredicted RBP11.57□□□□□ -0.56
CYLD-202ENST00000398568 S4R3C0 116 aa11.56□□□□□ -0.56
CYLD-202ENST00000398568 CADP27708 2225 aa11.56□□□□□ -0.56
CYLD-202ENST00000398568 LGALS9O00182 355 aa11.56□□□□□ -0.56
CYLD-202ENST00000398568 C9orf153Q5TBE3 101 aa11.56□□□□□ -0.56
CYLD-202ENST00000398568 C2orf82Q6UX34 121 aa11.56□□□□□ -0.56
CYLD-202ENST00000398568 SLC25A29Q8N8R3 303 aa11.56□□□□□ -0.56
CYLD-202ENST00000398568 CFHR4Q92496 578 aa11.56□□□□□ -0.56
CYLD-202ENST00000398568 LINC01587Q99440 93 aa11.56□□□□□ -0.56
CYLD-202ENST00000398568 USP9XQ93008 2570 aaPredicted RBP11.56□□□□□ -0.56
CYLD-202ENST00000398568 TRBV10-2A0A0K0K1G8 114 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 K7EIM0 57 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 P0DMU3 169 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 FAM231AP0DMU4 169 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 FAM231CP0DMU5 169 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 LINC00694P0DN24 101 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 IGFL2Q6UWQ7 119 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 Q6ZS46 218 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 A4D1N5 150 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 IGHV1-46P01743 117 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 IGHV3-33P01772 117 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 TMEM101Q96IK0 257 aa11.55□□□□□ -0.56
CYLD-202ENST00000398568 SUMO2P61956 95 aaKnown RBP11.55□□□□□ -0.56
CYLD-202ENST00000398568 LGALS3P17931 250 aaKnown RBP11.54□□□□□ -0.56
CYLD-202ENST00000398568 KLRB1Q12918 225 aa11.54□□□□□ -0.56
CYLD-202ENST00000398568 IGFL3Q6UXB1 125 aa11.54□□□□□ -0.56
CYLD-202ENST00000398568 ZNF575Q86XF7 245 aa11.54□□□□□ -0.56
CYLD-202ENST00000398568 SLC50A1Q9BRV3 221 aa11.54□□□□□ -0.56
CYLD-202ENST00000398568 NDUFB3O43676 98 aa11.54□□□□□ -0.56
CYLD-202ENST00000398568 TMEM170BQ5T4T1 132 aa11.54□□□□□ -0.56
CYLD-202ENST00000398568 CRYGBP07316 175 aa11.53□□□□□ -0.56
CYLD-202ENST00000398568 C8orf31Q8N9H6 132 aa11.53□□□□□ -0.56
CYLD-202ENST00000398568 UBTD1Q9HAC8 227 aa11.53□□□□□ -0.56
CYLD-202ENST00000398568 TEX36Q5VZQ5 186 aa11.53□□□□□ -0.56
CYLD-202ENST00000398568 IGKV3D-20A0A0C4DH25 116 aa11.52□□□□□ -0.56
CYLD-202ENST00000398568 C11orf86A6NJI1 115 aa11.52□□□□□ -0.56
CYLD-202ENST00000398568 GFRALQ6UXV0 394 aa11.52□□□□□ -0.56
CYLD-202ENST00000398568 C9orf106Q8NAJ2 232 aa11.52□□□□□ -0.56
CYLD-202ENST00000398568 SLC25A15Q9Y619 301 aa11.52□□□□□ -0.56
CYLD-202ENST00000398568 ROS1P08922 2347 aa11.52□□□□□ -0.56
CYLD-202ENST00000398568 MFAP4P55083 255 aa11.52□□□□□ -0.57
CYLD-202ENST00000398568 DYNAPQ8N1N2 210 aa11.52□□□□□ -0.57
CYLD-202ENST00000398568 DLX1P56177 255 aa11.52□□□□□ -0.57
CYLD-202ENST00000398568 RAI1Q7Z5J4 1906 aaPredicted RBP11.51□□□□□ -0.57
CYLD-202ENST00000398568 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.51□□□□□ -0.57
CYLD-202ENST00000398568 CCL8P80075 99 aa11.51□□□□□ -0.57
CYLD-202ENST00000398568 GCN1Q92616 2671 aaKnown RBP11.51□□□□□ -0.57
CYLD-202ENST00000398568 FAM236AA0A1B0GUQ0 79 aa11.51□□□□□ -0.57
CYLD-202ENST00000398568 FAM236BA0A1B0GV22 79 aa11.51□□□□□ -0.57
CYLD-202ENST00000398568 SMIM9A6NGZ8 99 aa11.51□□□□□ -0.57
CYLD-202ENST00000398568 AKAP6Q13023 2319 aa11.51□□□□□ -0.57
CYLD-202ENST00000398568 DLX6P56179 175 aa11.51□□□□□ -0.57
CYLD-202ENST00000398568 IGLV3-9A0A075B6K5 115 aa11.5□□□□□ -0.57
CYLD-202ENST00000398568 PMVKQ15126 192 aa11.5□□□□□ -0.57
CYLD-202ENST00000398568 ZNF672Q499Z4 452 aaPredicted RBP11.5□□□□□ -0.57
CYLD-202ENST00000398568 A0A0B4J2C4 111 aa11.5□□□□□ -0.57
CYLD-202ENST00000398568 J3KT08 172 aa11.5□□□□□ -0.57
CYLD-202ENST00000398568 NPFFO15130 113 aa11.5□□□□□ -0.57
CYLD-202ENST00000398568 TMEM263Q8WUH6 116 aaKnown RBP11.5□□□□□ -0.57
CYLD-202ENST00000398568 NDUFA7O95182 113 aa11.49□□□□□ -0.57
CYLD-202ENST00000398568 CRYBG3Q68DQ2 2970 aa11.49□□□□□ -0.57
CYLD-202ENST00000398568 LOC107984640A0A0U1RRK4 108 aa11.49□□□□□ -0.57
CYLD-202ENST00000398568 J3QQQ9 107 aa11.49□□□□□ -0.57
CYLD-202ENST00000398568 MGPP08493 103 aa11.48□□□□□ -0.57
CYLD-202ENST00000398568 C3orf22Q8N5N4 141 aa11.48□□□□□ -0.57
CYLD-202ENST00000398568 DUX3Q96PT4 197 aa11.48□□□□□ -0.57
CYLD-202ENST00000398568 TRGV11A0A075B6L2 103 aa11.48□□□□□ -0.57
CYLD-202ENST00000398568 TRBV7-7A0A0K0K1E9 115 aa11.48□□□□□ -0.57
CYLD-202ENST00000398568 CD3EP07766 207 aa11.48□□□□□ -0.57
CYLD-202ENST00000398568 COX6CP09669 75 aa11.48□□□□□ -0.57
CYLD-202ENST00000398568 ZNF256Q9Y2P7 627 aaPredicted RBP11.48□□□□□ -0.57
CYLD-202ENST00000398568 ZNF474Q6S9Z5 364 aaPredicted RBP11.48□□□□□ -0.57
CYLD-202ENST00000398568 C11orf21Q9P2W6 132 aa11.48□□□□□ -0.57
CYLD-202ENST00000398568 IGHV1-3A0A0C4DH29 117 aa11.47□□□□□ -0.57
CYLD-202ENST00000398568 FAM240AA0A1B0GVK7 77 aa11.47□□□□□ -0.57
CYLD-202ENST00000398568 PRAC2D3DTV9 90 aa11.47□□□□□ -0.57
CYLD-202ENST00000398568 IGHV1-8P0DP01 117 aa11.47□□□□□ -0.57
CYLD-202ENST00000398568 LRRC75A-AS1Q8N1F1 130 aa11.47□□□□□ -0.57
CYLD-202ENST00000398568 OR13C6PQ8NH95 151 aa11.47□□□□□ -0.57
CYLD-202ENST00000398568 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
CYLD-202ENST00000398568 MAP1AP78559 2803 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms