RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 CRLF1O75462 422 aa16.42■□□□□ 0.22
HMGA2-203ENST00000393578 KRTDAPP60985 99 aa16.42■□□□□ 0.22
HMGA2-203ENST00000393578 NSUN5P1Q3KNT7 163 aa16.42■□□□□ 0.22
HMGA2-203ENST00000393578 AP5S1Q9NUS5 200 aa16.42■□□□□ 0.22
HMGA2-203ENST00000393578 NCR2O95944 276 aa16.41■□□□□ 0.22
HMGA2-203ENST00000393578 CD7P09564 240 aa16.41■□□□□ 0.22
HMGA2-203ENST00000393578 FA2HQ7L5A8 372 aa16.41■□□□□ 0.22
HMGA2-203ENST00000393578 NPYP01303 97 aa16.4■□□□□ 0.22
HMGA2-203ENST00000393578 IFI27P40305 119 aaPredicted RBP16.4■□□□□ 0.22
HMGA2-203ENST00000393578 NDUFA11Q86Y39 141 aa16.4■□□□□ 0.22
HMGA2-203ENST00000393578 WNK1Q9H4A3 2382 aa16.4■□□□□ 0.22
HMGA2-203ENST00000393578 NXPH4O95158 308 aa16.4■□□□□ 0.22
HMGA2-203ENST00000393578 ZNF124Q15973 351 aa16.4■□□□□ 0.22
HMGA2-203ENST00000393578 PMCHL1Q16048 86 aa16.4■□□□□ 0.22
HMGA2-203ENST00000393578 KRTAP10-3P60369 221 aa16.39■□□□□ 0.21
HMGA2-203ENST00000393578 FN1P02751 2386 aaKnown RBP16.39■□□□□ 0.21
HMGA2-203ENST00000393578 IGHV1OR15-1A0A075B7D0 117 aa16.38■□□□□ 0.21
HMGA2-203ENST00000393578 LOC389332A0A1B0GUA5 103 aa16.38■□□□□ 0.21
HMGA2-203ENST00000393578 C3orf79P0CE67 100 aa16.38■□□□□ 0.21
HMGA2-203ENST00000393578 SPRY2O43597 315 aa16.38■□□□□ 0.21
HMGA2-203ENST00000393578 SAP30O75446 220 aa16.37■□□□□ 0.21
HMGA2-203ENST00000393578 ODF3L2Q3SX64 289 aa16.37■□□□□ 0.21
HMGA2-203ENST00000393578 MAP1LC3AQ9H492 121 aa16.37■□□□□ 0.21
HMGA2-203ENST00000393578 IGHV3-16A0A0C4DH30 117 aa16.37■□□□□ 0.21
HMGA2-203ENST00000393578 RBMY1BA6NDE4 496 aaKnown RBP16.37■□□□□ 0.21
HMGA2-203ENST00000393578 RBMY1EA6NEQ0 496 aaKnown RBP16.37■□□□□ 0.21
HMGA2-203ENST00000393578 CRXO43186 299 aaPredicted RBP16.37■□□□□ 0.21
HMGA2-203ENST00000393578 GAS8-AS1O95177 125 aa16.37■□□□□ 0.21
HMGA2-203ENST00000393578 TNFRSF6BO95407 300 aa16.37■□□□□ 0.21
HMGA2-203ENST00000393578 RBMY1DP0C7P1 496 aaKnown RBP16.37■□□□□ 0.21
HMGA2-203ENST00000393578 CLUHP3Q96NS8 147 aa16.37■□□□□ 0.21
HMGA2-203ENST00000393578 LEPROTL1O95214 131 aa16.36■□□□□ 0.21
HMGA2-203ENST00000393578 FXYD7P58549 80 aa16.36■□□□□ 0.21
HMGA2-203ENST00000393578 Q8N1Y9 231 aa16.36■□□□□ 0.21
HMGA2-203ENST00000393578 MRAP2Q96G30 205 aa16.36■□□□□ 0.21
HMGA2-203ENST00000393578 AP1S3Q96PC3 154 aa16.36■□□□□ 0.21
HMGA2-203ENST00000393578 DPH3P1Q9H4G8 78 aa16.36■□□□□ 0.21
HMGA2-203ENST00000393578 Q8N976 141 aa16.35■□□□□ 0.21
HMGA2-203ENST00000393578 C9orf85Q96MD7 179 aa16.35■□□□□ 0.21
HMGA2-203ENST00000393578 PKIAP61925 76 aa16.35■□□□□ 0.21
HMGA2-203ENST00000393578 IGLV1-51P01701 117 aa16.34■□□□□ 0.21
HMGA2-203ENST00000393578 BTF3P20290 206 aaKnown RBP16.34■□□□□ 0.21
HMGA2-203ENST00000393578 C14orf178Q8N769 122 aaPredicted RBP16.34■□□□□ 0.21
HMGA2-203ENST00000393578 OR2K2Q8NGT1 345 aa16.34■□□□□ 0.21
HMGA2-203ENST00000393578 OR11H12B2RN74 326 aa16.33■□□□□ 0.21
HMGA2-203ENST00000393578 GATA1P15976 413 aaPredicted RBP16.33■□□□□ 0.21
HMGA2-203ENST00000393578 TEX43Q6ZNM6 134 aa16.33■□□□□ 0.21
HMGA2-203ENST00000393578 MDFICQ9P1T7 246 aa16.33■□□□□ 0.21
HMGA2-203ENST00000393578 RBMY1A1P0DJD3 496 aaKnown RBP16.33■□□□□ 0.2
HMGA2-203ENST00000393578 RBMY1CP0DJD4 496 aa16.33■□□□□ 0.2
HMGA2-203ENST00000393578 CMC4P56277 68 aaPredicted RBP16.33■□□□□ 0.2
HMGA2-203ENST00000393578 RBMY1FQ15415 496 aaKnown RBP16.33■□□□□ 0.2
HMGA2-203ENST00000393578 ZNF664Q8N3J9 261 aa16.33■□□□□ 0.2
HMGA2-203ENST00000393578 NRACQ8N912 160 aa16.33■□□□□ 0.2
HMGA2-203ENST00000393578 NXT2Q9NPJ8 142 aaKnown RBP16.33■□□□□ 0.2
HMGA2-203ENST00000393578 MUC4Q99102 2169 aa16.32■□□□□ 0.2
HMGA2-203ENST00000393578 TRGV11A0A075B6L2 103 aa16.32■□□□□ 0.2
HMGA2-203ENST00000393578 TRAV26-2A0A0B4J265 109 aa16.32■□□□□ 0.2
HMGA2-203ENST00000393578 TSTD3H0UI37 97 aa16.32■□□□□ 0.2
HMGA2-203ENST00000393578 DEFB125Q8N687 156 aa16.32■□□□□ 0.2
HMGA2-203ENST00000393578 HSPB8Q9UJY1 196 aa16.32■□□□□ 0.2
HMGA2-203ENST00000393578 C2CD3Q4AC94 2353 aa16.32■□□□□ 0.2
HMGA2-203ENST00000393578 LINC01546A6NGU7 62 aa16.31■□□□□ 0.2
HMGA2-203ENST00000393578 TMEM70Q9BUB7 260 aa16.31■□□□□ 0.2
HMGA2-203ENST00000393578 PRSS47A8MTI9 375 aa16.31■□□□□ 0.2
HMGA2-203ENST00000393578 FLNBO75369 2602 aaKnown RBP16.3■□□□□ 0.2
HMGA2-203ENST00000393578 STHQ8IWL8 128 aa16.3■□□□□ 0.2
HMGA2-203ENST00000393578 CBY3A6NI87 242 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 PF4P02776 101 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 LINC00173Q6ZV60 143 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 POM121L12Q8N7R1 296 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 SYT8Q8NBV8 401 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 KIF25-AS1Q9Y6Z4 181 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 SMIM17P0DL12 118 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 C20orf144Q9BQM9 153 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 PRO1933Q9H354 126 aa16.29■□□□□ 0.2
HMGA2-203ENST00000393578 A0A096LNJ9 63 aa16.28■□□□□ 0.2
HMGA2-203ENST00000393578 FAM110AQ9BQ89 295 aa16.28■□□□□ 0.2
HMGA2-203ENST00000393578 LINC00482Q8N8I6 264 aa16.27■□□□□ 0.2
HMGA2-203ENST00000393578 Q8N8P6 123 aa16.27■□□□□ 0.2
HMGA2-203ENST00000393578 NIPBLQ6KC79 2804 aaeCLIP16.27■□□□□ 0.2
HMGA2-203ENST00000393578 SYS1-DBNDD2H3BUS1 97 aa16.27■□□□□ 0.19
HMGA2-203ENST00000393578 MGPP08493 103 aa16.27■□□□□ 0.19
HMGA2-203ENST00000393578 TRPT1Q86TN4 253 aaKnown RBP16.27■□□□□ 0.19
HMGA2-203ENST00000393578 MAP1LC3CQ9BXW4 147 aa16.27■□□□□ 0.19
HMGA2-203ENST00000393578 IGLV2-18A0A075B6J9 118 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 LINC00587B1AMM8 73 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 INSP01308 110 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 HBDP02042 147 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 LINC00315P59091 139 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 BEAN1Q3B7T3 259 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 LINC00467Q9BRT7 94 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 ZNF747Q9BV97 191 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 VAMP8Q9BV40 100 aa16.26■□□□□ 0.19
HMGA2-203ENST00000393578 RASL10AQ92737 203 aa16.25■□□□□ 0.19
HMGA2-203ENST00000393578 JPT2Q9H910 190 aa16.25■□□□□ 0.19
HMGA2-203ENST00000393578 PPP1R17O96001 155 aa16.24■□□□□ 0.19
HMGA2-203ENST00000393578 HTN1P15515 57 aa16.24■□□□□ 0.19
HMGA2-203ENST00000393578 C20orf78Q9BR46 151 aa16.24■□□□□ 0.19
HMGA2-203ENST00000393578 NUTF2P61970 127 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms