RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 A0A0J9YY99 117 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 C9JAW5 83 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 DLX6P56179 175 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 KLRB1Q12918 225 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 CFHR4Q92496 578 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 TOMM6Q96B49 74 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 ERCC8Q13216 396 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 SVEP1Q4LDE5 3571 aa11.25□□□□□ -0.61
VPS9D1-201ENST00000389386 IGKV3D-20A0A0C4DH25 116 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 C17orf100A8MU93 164 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 LYPD2Q6UXB3 125 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 SMIM2Q9BVW6 85 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 DLX1P56177 255 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 Q8N1Y9 231 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 BAALCQ8WXS3 180 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 ODF3Q96PU9 254 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 PRORYQ9H606 182 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 PRO1854Q9UHT4 67 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 S4R3C0 116 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 ARHGAP32A7KAX9 2087 aa11.24□□□□□ -0.61
VPS9D1-201ENST00000389386 IGHV3-30P01768 117 aa11.23□□□□□ -0.61
VPS9D1-201ENST00000389386 IGHV3-30-5P0DP03 117 aa11.23□□□□□ -0.61
VPS9D1-201ENST00000389386 GRNP28799 593 aaKnown RBP11.23□□□□□ -0.61
VPS9D1-201ENST00000389386 C11orf21Q9P2W6 132 aa11.23□□□□□ -0.61
VPS9D1-201ENST00000389386 CSDC2Q9Y534 153 aaKnown RBP11.23□□□□□ -0.61
VPS9D1-201ENST00000389386 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
VPS9D1-201ENST00000389386 ORMDL2Q53FV1 153 aa11.23□□□□□ -0.61
VPS9D1-201ENST00000389386 SMAD5-AS1Q9Y6J3 95 aa11.23□□□□□ -0.61
VPS9D1-201ENST00000389386 C3orf36Q3SXR2 165 aa11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 MEIG1Q5JSS6 88 aa11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 TRPT1Q86TN4 253 aaKnown RBP11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 DYNAPQ8N1N2 210 aa11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 NUP37Q8NFH4 326 aa11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 LYNX1G3V0Z9 82 aa11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 IGHV1-8P0DP01 117 aa11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 LYNX1P0DP58 116 aa11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 LINC01560Q8TB33 94 aa11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 NTN5Q8WTR8 489 aaPredicted RBP11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 HRNRQ86YZ3 2850 aaPredicted RBP11.22□□□□□ -0.61
VPS9D1-201ENST00000389386 Q6ZS46 218 aa11.21□□□□□ -0.61
VPS9D1-201ENST00000389386 C15orf53Q8NAA6 179 aa11.21□□□□□ -0.61
VPS9D1-201ENST00000389386 MDFICQ9P1T7 246 aa11.21□□□□□ -0.61
VPS9D1-201ENST00000389386 IGHV1-3A0A0C4DH29 117 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 IGHV7-4-1A0A0J9YVY3 117 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 PRAC2D3DTV9 90 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 E7EQL1 145 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 NDUFB3O43676 98 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 LOXP28300 417 aaPredicted RBP11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 TMEM155Q4W5P6 130 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 OR10J6PQ8NGY7 276 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 NRGNQ92686 78 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 DYNLRB1Q9NP97 96 aa11.21□□□□□ -0.62
VPS9D1-201ENST00000389386 WNK2Q9Y3S1 2297 aa11.2□□□□□ -0.62
VPS9D1-201ENST00000389386 FLNCQ14315 2725 aa11.2□□□□□ -0.62
VPS9D1-201ENST00000389386 SLC25A29Q8N8R3 303 aa11.2□□□□□ -0.62
VPS9D1-201ENST00000389386 IGHV4-4A0A075B6R2 117 aa11.2□□□□□ -0.62
VPS9D1-201ENST00000389386 A4D1N5 150 aa11.19□□□□□ -0.62
VPS9D1-201ENST00000389386 CCL21O00585 134 aa11.19□□□□□ -0.62
VPS9D1-201ENST00000389386 TRAV25A0A0B4J276 109 aa11.19□□□□□ -0.62
VPS9D1-201ENST00000389386 C2orf66Q6UXQ4 117 aa11.19□□□□□ -0.62
VPS9D1-201ENST00000389386 RNASE6Q93091 150 aaKnown RBP11.19□□□□□ -0.62
VPS9D1-201ENST00000389386 LINC01600Q96MT4 127 aa11.19□□□□□ -0.62
VPS9D1-201ENST00000389386 TRAV8-4A0A0B4J246 113 aa11.18□□□□□ -0.62
VPS9D1-201ENST00000389386 TMEM178BH3BS89 294 aa11.18□□□□□ -0.62
VPS9D1-201ENST00000389386 RPL13AP40429 203 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-201ENST00000389386 CDSNQ15517 529 aa11.18□□□□□ -0.62
VPS9D1-201ENST00000389386 MYO18BQ8IUG5 2567 aa11.18□□□□□ -0.62
VPS9D1-201ENST00000389386 F8W735 103 aaPredicted RBP11.18□□□□□ -0.62
VPS9D1-201ENST00000389386 SUMO2P61956 95 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-201ENST00000389386 SLC50A1Q9BRV3 221 aa11.18□□□□□ -0.62
VPS9D1-201ENST00000389386 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 C11orf86A6NJI1 115 aa11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 IGLV1-47P01700 117 aa11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 IGHV3-33P01772 117 aa11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 CRYGDP07320 174 aa11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 MFAP4P55083 255 aa11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 SPANXN1Q5VSR9 72 aa11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 TEX49A0A1B0GTD5 131 aa11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 TIMD4Q96H15 378 aa11.17□□□□□ -0.62
VPS9D1-201ENST00000389386 LY6HO94772 140 aa11.16□□□□□ -0.62
VPS9D1-201ENST00000389386 P0DMU3 169 aa11.16□□□□□ -0.62
VPS9D1-201ENST00000389386 FAM231AP0DMU4 169 aa11.16□□□□□ -0.62
VPS9D1-201ENST00000389386 FAM231CP0DMU5 169 aa11.16□□□□□ -0.62
VPS9D1-201ENST00000389386 IGLV4-69A0A075B6H9 119 aa11.16□□□□□ -0.62
VPS9D1-201ENST00000389386 TSPEAR-AS2P59090 65 aa11.16□□□□□ -0.62
VPS9D1-201ENST00000389386 TMEM126AQ9H061 195 aa11.16□□□□□ -0.62
VPS9D1-201ENST00000389386 MAP1AP78559 2803 aaPredicted RBP11.16□□□□□ -0.62
VPS9D1-201ENST00000389386 BUB1B-PAK6H3BSN5 160 aa11.15□□□□□ -0.62
VPS9D1-201ENST00000389386 HERVK_113P61574 105 aa11.15□□□□□ -0.62
VPS9D1-201ENST00000389386 LINC01620Q4KN68 170 aa11.15□□□□□ -0.62
VPS9D1-201ENST00000389386 C3orf56Q8N813 242 aa11.15□□□□□ -0.62
VPS9D1-201ENST00000389386 FANCD2OSQ96PS1 177 aa11.15□□□□□ -0.62
VPS9D1-201ENST00000389386 RBAKDNA6NC62 111 aa11.15□□□□□ -0.62
VPS9D1-201ENST00000389386 ELANEP08246 267 aa11.15□□□□□ -0.62
VPS9D1-201ENST00000389386 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
VPS9D1-201ENST00000389386 UTP20O75691 2785 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms