RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PRR20EP86478 221 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 PRR20CP86479 221 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 PRR20DP86480 221 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 PRR20BP86481 221 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 PRR20AP86496 221 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 TMEM14CQ9P0S9 112 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 SPART-AS1P0CW21 52 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 QRFPP83859 136 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 BRCA1P38398 1863 aaKnown RBP4.62□□□□□ -1.67
RFX3-204ENST00000382004 H3BQ85 93 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 RALGAPA2Q2PPJ7 1873 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 FXYD5Q96DB9 178 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 A4D1N5 150 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 IGKV2D-26A0A0A0MRZ7 120 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 NDUFA1O15239 70 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 SLURP1P55000 103 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 C9orf66Q5T8R8 295 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 GPHB5Q86YW7 130 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 DIRC1Q969H9 104 aa4.62□□□□□ -1.67
RFX3-204ENST00000382004 TRAV23DV6A0A075B6W5 121 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 LECT2O14960 151 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 J3QLI3 93 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 WFDC11Q8NEX6 87 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 RNF138Q8WVD3 245 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 IGLV3-9A0A075B6K5 115 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 USP17L23D6RBM5 183 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 GP9P14770 177 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 LMO1P25800 156 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 ZNF726P1Q15940 193 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 C17orf58Q2M2W7 97 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 FAM231DQ6ZW35 169 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 CLEC2BQ92478 149 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 C11orf52Q96A22 123 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 C16orf74Q96GX8 76 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 CSRP3P50461 194 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 LYPD6Q86Y78 171 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 B9D2Q9BPU9 175 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 IGKV1-6A0A0C4DH72 117 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 DAZ2Q13117 558 aaKnown RBP4.61□□□□□ -1.67
RFX3-204ENST00000382004 Q6ZS49 121 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
RFX3-204ENST00000382004 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
RFX3-204ENST00000382004 IGLC1P0CG04 106 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 LINC01620Q4KN68 170 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 A0A096LNI7 61 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 ELANEP08246 267 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 WT1-ASQ06250 92 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 LCTP09848 1927 aa4.61□□□□□ -1.67
RFX3-204ENST00000382004 SCN10AQ9Y5Y9 1956 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 A0A0J9YWU9 116 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 K7EM74 188 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 DIAPH2-AS1Q14236 149 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 LGALS9O00182 355 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 DEFB4AO15263 64 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 TRBV10-2A0A0K0K1G8 114 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 IGHV2-70P01814 119 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 CTSGP08311 255 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 WFDC2Q14508 124 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 WI2-2373I1.2A0A1W2PRP0 233 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 WISP1O95388 367 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 ATP5G1P05496 136 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 Q6ZS92 163 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 GTSF1Q8WW33 167 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 ZNF747Q9BV97 191 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 WNK1Q9H4A3 2382 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 A0A0J9YXV3 536 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 B3GALT5-AS1P59052 145 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 DEFB112Q30KQ8 113 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 HHLA3Q9XRX5 114 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 SBF2Q86WG5 1849 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 JMJD7-PLA2G4BH0Y9G9 81 aa4.6□□□□□ -1.67
RFX3-204ENST00000382004 FGF23Q9GZV9 251 aaPredicted RBP4.59□□□□□ -1.67
RFX3-204ENST00000382004 J3QKU1 62 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 K7EN84 100 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 TMEM256-PLSCR3K7ERE1 68 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 UPK3BQ9BT76 320 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 TANC2Q9HCD6 1990 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 IGKV2-24A0A0C4DH68 120 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 FOXI1Q12951 378 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 LINC01545Q5VT33 79 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 LOXP28300 417 aaPredicted RBP4.59□□□□□ -1.67
RFX3-204ENST00000382004 SPAG11BQ08648 103 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 AGPAT4-IT1Q9H0P7 198 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 KLK12Q9UKR0 248 aa4.59□□□□□ -1.67
RFX3-204ENST00000382004 VPREB3Q9UKI3 123 aa4.59□□□□□ -1.68
RFX3-204ENST00000382004 MED13Q9UHV7 2174 aa4.59□□□□□ -1.68
RFX3-204ENST00000382004 BPY2O14599 106 aa4.59□□□□□ -1.68
RFX3-204ENST00000382004 HOXB4P17483 251 aaPredicted RBP4.59□□□□□ -1.68
RFX3-204ENST00000382004 RPL39P62891 51 aaKnown RBP4.58□□□□□ -1.68
RFX3-204ENST00000382004 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 RLFQ13129 1914 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 ZNF491Q8N8L2 437 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 KLK5Q9Y337 293 aaPredicted RBP4.58□□□□□ -1.68
RFX3-204ENST00000382004 UBR3Q6ZT12 1888 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 TEN1Q86WV5 123 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 IGHV4-30-2A0A087WSY4 118 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 WFDC10BQ8IUB3 73 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 HIGD2AQ9BW72 106 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 NHSL1Q5SYE7 1610 aa4.58□□□□□ -1.68
RFX3-204ENST00000382004 SBF1O95248 1867 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms