RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 SORL1Q92673 2214 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 FN1P02751 2386 aaKnown RBP11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 RBMY1BA6NDE4 496 aaKnown RBP11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 RBMY1EA6NEQ0 496 aaKnown RBP11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 M0R381 172 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 SPRY2O43597 315 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 NXPH4O95158 308 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 RBMY1DP0C7P1 496 aaKnown RBP11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 NDUFA11Q86Y39 141 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 PRSS3P2Q8NHM4 247 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 LAMTOR2Q9Y2Q5 125 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 AGRNO00468 2067 aa11.37□□□□□ -0.59
RAB3IP-204ENST00000378815 GAS8-AS1O95177 125 aa11.36□□□□□ -0.59
RAB3IP-204ENST00000378815 CD7P09564 240 aa11.36□□□□□ -0.59
RAB3IP-204ENST00000378815 KRTDAPP60985 99 aa11.36□□□□□ -0.59
RAB3IP-204ENST00000378815 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
RAB3IP-204ENST00000378815 SETXQ7Z333 2677 aaKnown RBP11.36□□□□□ -0.59
RAB3IP-204ENST00000378815 CRXO43186 299 aaPredicted RBP11.36□□□□□ -0.59
RAB3IP-204ENST00000378815 IFI27P40305 119 aaPredicted RBP11.36□□□□□ -0.59
RAB3IP-204ENST00000378815 ODF3L2Q3SX64 289 aa11.36□□□□□ -0.59
RAB3IP-204ENST00000378815 IGHV1OR15-1A0A075B7D0 117 aa11.35□□□□□ -0.59
RAB3IP-204ENST00000378815 C3orf79P0CE67 100 aa11.35□□□□□ -0.59
RAB3IP-204ENST00000378815 FA2HQ7L5A8 372 aa11.35□□□□□ -0.59
RAB3IP-204ENST00000378815 IGHV3-16A0A0C4DH30 117 aa11.35□□□□□ -0.59
RAB3IP-204ENST00000378815 LOC389332A0A1B0GUA5 103 aa11.35□□□□□ -0.59
RAB3IP-204ENST00000378815 Q8N976 141 aa11.35□□□□□ -0.59
RAB3IP-204ENST00000378815 SAP30O75446 220 aa11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 FXYD7P58549 80 aa11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 CLUHP3Q96NS8 147 aa11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 TNFRSF6BO95407 300 aa11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 RBMY1A1P0DJD3 496 aaKnown RBP11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 RBMY1CP0DJD4 496 aa11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 RBMY1FQ15415 496 aaKnown RBP11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 Q8N1Y9 231 aa11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 C9orf85Q96MD7 179 aa11.34□□□□□ -0.59
RAB3IP-204ENST00000378815 IGLV1-51P01701 117 aa11.33□□□□□ -0.6
RAB3IP-204ENST00000378815 GATA1P15976 413 aaPredicted RBP11.33□□□□□ -0.6
RAB3IP-204ENST00000378815 MDFICQ9P1T7 246 aa11.33□□□□□ -0.6
RAB3IP-204ENST00000378815 MRAP2Q96G30 205 aa11.33□□□□□ -0.6
RAB3IP-204ENST00000378815 MAP1LC3AQ9H492 121 aa11.33□□□□□ -0.6
RAB3IP-204ENST00000378815 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.6
RAB3IP-204ENST00000378815 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
RAB3IP-204ENST00000378815 NRACQ8N912 160 aa11.32□□□□□ -0.6
RAB3IP-204ENST00000378815 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
RAB3IP-204ENST00000378815 AP1S3Q96PC3 154 aa11.32□□□□□ -0.6
RAB3IP-204ENST00000378815 TRAV26-2A0A0B4J265 109 aa11.32□□□□□ -0.6
RAB3IP-204ENST00000378815 LEPROTL1O95214 131 aa11.32□□□□□ -0.6
RAB3IP-204ENST00000378815 TEX43Q6ZNM6 134 aa11.32□□□□□ -0.6
RAB3IP-204ENST00000378815 ZNF664Q8N3J9 261 aa11.32□□□□□ -0.6
RAB3IP-204ENST00000378815 WNK1Q9H4A3 2382 aa11.31□□□□□ -0.6
RAB3IP-204ENST00000378815 LINC01546A6NGU7 62 aa11.31□□□□□ -0.6
RAB3IP-204ENST00000378815 OR11H12B2RN74 326 aa11.31□□□□□ -0.6
RAB3IP-204ENST00000378815 DEFB125Q8N687 156 aa11.31□□□□□ -0.6
RAB3IP-204ENST00000378815 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
RAB3IP-204ENST00000378815 PKIAP61925 76 aa11.31□□□□□ -0.6
RAB3IP-204ENST00000378815 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
RAB3IP-204ENST00000378815 KIF25-AS1Q9Y6Z4 181 aa11.31□□□□□ -0.6
RAB3IP-204ENST00000378815 A0A096LNJ9 63 aa11.3□□□□□ -0.6
RAB3IP-204ENST00000378815 PRSS47A8MTI9 375 aa11.3□□□□□ -0.6
RAB3IP-204ENST00000378815 POM121L12Q8N7R1 296 aa11.3□□□□□ -0.6
RAB3IP-204ENST00000378815 C2CD3Q4AC94 2353 aa11.3□□□□□ -0.6
RAB3IP-204ENST00000378815 TRGV11A0A075B6L2 103 aa11.3□□□□□ -0.6
RAB3IP-204ENST00000378815 LINC00482Q8N8I6 264 aa11.3□□□□□ -0.6
RAB3IP-204ENST00000378815 NXT2Q9NPJ8 142 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-204ENST00000378815 MUC4Q99102 2169 aa11.29□□□□□ -0.6
RAB3IP-204ENST00000378815 CMC4P56277 68 aaPredicted RBP11.29□□□□□ -0.6
RAB3IP-204ENST00000378815 LINC00315P59091 139 aa11.29□□□□□ -0.6
RAB3IP-204ENST00000378815 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
RAB3IP-204ENST00000378815 HSPB8Q9UJY1 196 aa11.29□□□□□ -0.6
RAB3IP-204ENST00000378815 PF4P02776 101 aa11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 TRPT1Q86TN4 253 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 STHQ8IWL8 128 aa11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 FAM110AQ9BQ89 295 aa11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 PRO1933Q9H354 126 aa11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 IGLV2-18A0A075B6J9 118 aa11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 CBY3A6NI87 242 aa11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 TSTD3H0UI37 97 aa11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
RAB3IP-204ENST00000378815 LINC00587B1AMM8 73 aa11.27□□□□□ -0.6
RAB3IP-204ENST00000378815 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.6
RAB3IP-204ENST00000378815 SYT8Q8NBV8 401 aa11.27□□□□□ -0.6
RAB3IP-204ENST00000378815 RASL10AQ92737 203 aa11.27□□□□□ -0.6
RAB3IP-204ENST00000378815 C20orf144Q9BQM9 153 aa11.27□□□□□ -0.6
RAB3IP-204ENST00000378815 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.6
RAB3IP-204ENST00000378815 JPT2Q9H910 190 aa11.27□□□□□ -0.6
RAB3IP-204ENST00000378815 SYS1-DBNDD2H3BUS1 97 aa11.27□□□□□ -0.61
RAB3IP-204ENST00000378815 MGPP08493 103 aa11.27□□□□□ -0.61
RAB3IP-204ENST00000378815 SPATA12Q7Z6I5 190 aa11.27□□□□□ -0.61
RAB3IP-204ENST00000378815 Q8N8P6 123 aa11.27□□□□□ -0.61
RAB3IP-204ENST00000378815 ZNF747Q9BV97 191 aa11.27□□□□□ -0.61
RAB3IP-204ENST00000378815 INSP01308 110 aa11.26□□□□□ -0.61
RAB3IP-204ENST00000378815 SMIM17P0DL12 118 aa11.26□□□□□ -0.61
RAB3IP-204ENST00000378815 C19orf73Q9NVV2 129 aa11.26□□□□□ -0.61
RAB3IP-204ENST00000378815 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
RAB3IP-204ENST00000378815 KIR2DL5BA0A0G2JN68 375 aa11.25□□□□□ -0.61
RAB3IP-204ENST00000378815 KIR2DL5BA0A0G2JPC4 375 aa11.25□□□□□ -0.61
RAB3IP-204ENST00000378815 HBDP02042 147 aa11.25□□□□□ -0.61
RAB3IP-204ENST00000378815 KIR2DL5AQ8N109 375 aa11.25□□□□□ -0.61
RAB3IP-204ENST00000378815 MAP1LC3CQ9BXW4 147 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms