RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 NOP10Q9NPE3 64 aaKnown RBP8.51□□□□□ -1.05
LSM2-208ENST00000375661 TIMM8BQ9Y5J9 83 aaPredicted RBP8.51□□□□□ -1.05
LSM2-208ENST00000375661 TRGV11A0A075B6L2 103 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 IGHV3-16A0A0C4DH30 117 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 LYRM9A8MSI8 78 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 SNURFLB1AK76 121 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 C9JCJ5 164 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 CEBPGP53567 150 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 PEA15Q15121 130 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 LINC00612Q8N6U2 182 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 ZNRF2Q8NHG8 242 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 KCNS1Q96KK3 526 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 SDF2L1Q9HCN8 221 aa8.5□□□□□ -1.05
LSM2-208ENST00000375661 KRBOX1C9JBD0 128 aa8.49□□□□□ -1.05
LSM2-208ENST00000375661 ORM1P02763 201 aa8.49□□□□□ -1.05
LSM2-208ENST00000375661 DAZ2Q13117 558 aaKnown RBP8.49□□□□□ -1.05
LSM2-208ENST00000375661 OCC1Q8TAD7 63 aa8.49□□□□□ -1.05
LSM2-208ENST00000375661 SMIM12Q96EX1 92 aa8.49□□□□□ -1.05
LSM2-208ENST00000375661 SMDT1Q9H4I9 107 aa8.49□□□□□ -1.05
LSM2-208ENST00000375661 C19orf71A6NCJ1 209 aa8.48□□□□□ -1.05
LSM2-208ENST00000375661 M0R036 132 aa8.48□□□□□ -1.05
LSM2-208ENST00000375661 SPINK4O60575 86 aa8.48□□□□□ -1.05
LSM2-208ENST00000375661 MGST1P10620 155 aaKnown RBP8.48□□□□□ -1.05
LSM2-208ENST00000375661 RNASE3P12724 160 aaKnown RBP8.48□□□□□ -1.05
LSM2-208ENST00000375661 ZNF415Q09FC8 603 aa8.48□□□□□ -1.05
LSM2-208ENST00000375661 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
LSM2-208ENST00000375661 PRR27Q6MZM9 219 aa8.48□□□□□ -1.05
LSM2-208ENST00000375661 Q6ZTI0 123 aa8.48□□□□□ -1.05
LSM2-208ENST00000375661 TMSB15BA0A087X1C1 80 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 B4DEV8 164 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 K7EN84 100 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 DEFB130BP0DP73 79 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 DEFB130AP0DP74 79 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 CCL18P55774 89 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 RPL19P84098 196 aaKnown RBP8.47□□□□□ -1.05
LSM2-208ENST00000375661 OR5I1Q13606 314 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 SMIM7Q9BQ49 75 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
LSM2-208ENST00000375661 TRGV1A0A0A0MS02 117 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 GAGE12BA1L429 117 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 GRIFINA4D1Z8 144 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 ZNF727A8MUV8 499 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 GAGE7O76087 117 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 GAGE12FP0CL80 117 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 GAGE12GP0CL81 117 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 GAGE12IP0CL82 117 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 DNLZQ5SXM8 178 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 SPXQ9BT56 116 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 MRPL16Q9NX20 251 aaKnown RBP8.46□□□□□ -1.06
LSM2-208ENST00000375661 LY96Q9Y6Y9 160 aa8.46□□□□□ -1.06
LSM2-208ENST00000375661 SPATA12Q7Z6I5 190 aa8.45□□□□□ -1.06
LSM2-208ENST00000375661 NUDT10Q8NFP7 164 aa8.45□□□□□ -1.06
LSM2-208ENST00000375661 RASL10AQ92737 203 aa8.45□□□□□ -1.06
LSM2-208ENST00000375661 NUDT11Q96G61 164 aa8.45□□□□□ -1.06
LSM2-208ENST00000375661 NUDT3O95989 172 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 ATP5G1P05496 136 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 BTF3P20290 206 aaKnown RBP8.44□□□□□ -1.06
LSM2-208ENST00000375661 ASIPP42127 132 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 FAM74A3Q4VXF1 159 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 TTC32Q5I0X7 151 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 LINC01551Q86U37 167 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 DAZAP1Q96EP5 407 aaKnown RBP8.44□□□□□ -1.06
LSM2-208ENST00000375661 C18orf15Q96N68 181 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 BIN3Q9NQY0 253 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 LINC00588Q9Y4M8 146 aa8.44□□□□□ -1.06
LSM2-208ENST00000375661 F5H768 121 aa8.43□□□□□ -1.06
LSM2-208ENST00000375661 H3BVH4 76 aa8.43□□□□□ -1.06
LSM2-208ENST00000375661 M0R2P5 195 aa8.43□□□□□ -1.06
LSM2-208ENST00000375661 CXCL1P09341 107 aa8.43□□□□□ -1.06
LSM2-208ENST00000375661 ARMS2P0C7Q2 107 aa8.43□□□□□ -1.06
LSM2-208ENST00000375661 S100A4P26447 101 aaKnown RBP8.43□□□□□ -1.06
LSM2-208ENST00000375661 OR2D3Q8NGH3 330 aa8.43□□□□□ -1.06
LSM2-208ENST00000375661 PTH2Q96A98 100 aa8.43□□□□□ -1.06
LSM2-208ENST00000375661 RNASE7Q9H1E1 156 aaKnown RBP8.43□□□□□ -1.06
LSM2-208ENST00000375661 IL36BQ9NZH7 164 aa8.43□□□□□ -1.06
LSM2-208ENST00000375661 LRP1BQ9NZR2 4599 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 LINC00862A6NCI5 91 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 P01737 135 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 SFTA3P0C7M3 94 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 GZMBP10144 247 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 RPL23P62829 140 aaKnown RBP8.42□□□□□ -1.06
LSM2-208ENST00000375661 TMEM241Q24JQ0 296 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 ZNF876PQ49A33 203 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 FAM231DQ6ZW35 169 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 NAT8Q9UHE5 227 aa8.42□□□□□ -1.06
LSM2-208ENST00000375661 TRGV2A0A075B6R0 118 aa8.41□□□□□ -1.06
LSM2-208ENST00000375661 A0A1W2PPQ1 181 aa8.41□□□□□ -1.06
LSM2-208ENST00000375661 HOXA5P20719 270 aa8.41□□□□□ -1.06
LSM2-208ENST00000375661 COMMD7Q86VX2 200 aa8.41□□□□□ -1.06
LSM2-208ENST00000375661 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
LSM2-208ENST00000375661 Q9H8V8 135 aa8.41□□□□□ -1.06
LSM2-208ENST00000375661 SNAI2O43623 268 aa8.4□□□□□ -1.06
LSM2-208ENST00000375661 IGHV3-53P01767 116 aa8.4□□□□□ -1.06
LSM2-208ENST00000375661 IGLC6P0CF74 106 aa8.4□□□□□ -1.06
LSM2-208ENST00000375661 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
LSM2-208ENST00000375661 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
LSM2-208ENST00000375661 UQCC3Q6UW78 93 aa8.4□□□□□ -1.06
LSM2-208ENST00000375661 ISOC2Q96AB3 205 aa8.4□□□□□ -1.06
LSM2-208ENST00000375661 ZNF479Q96JC4 524 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms