RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 FAM159AQ6UWV7 190 aa14.56□□□□□ -0.08
HDAC1-201ENST00000373548 MAP1LC3AQ9H492 121 aa14.56□□□□□ -0.08
HDAC1-201ENST00000373548 HSPB8Q9UJY1 196 aa14.56□□□□□ -0.08
HDAC1-201ENST00000373548 A0A1W2PRX2 142 aa14.56□□□□□ -0.08
HDAC1-201ENST00000373548 MUC4Q99102 2169 aa14.55□□□□□ -0.08
HDAC1-201ENST00000373548 CUBNO60494 3623 aa14.55□□□□□ -0.08
HDAC1-201ENST00000373548 TRAV12-2A0A075B6T6 113 aa14.55□□□□□ -0.08
HDAC1-201ENST00000373548 AMTNQ6UX39 209 aa14.55□□□□□ -0.08
HDAC1-201ENST00000373548 TRAV2A0A0B4J234 112 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 TRAV26-2A0A0B4J265 109 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 HILS1P60008 231 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 FHL3Q13643 280 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 SPINK13Q1W4C9 94 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 DYNLRB2Q8TF09 96 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 ZNF418Q8TF45 676 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-201ENST00000373548 ZNF747Q9BV97 191 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 SETXQ7Z333 2677 aaKnown RBP14.54□□□□□ -0.08
HDAC1-201ENST00000373548 CDKN1BP46527 198 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 DEFB131AP59861 70 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 CITED2Q99967 270 aaPredicted RBP14.54□□□□□ -0.08
HDAC1-201ENST00000373548 MAP1LC3CQ9BXW4 147 aa14.54□□□□□ -0.08
HDAC1-201ENST00000373548 TSPOP30536 169 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 DEFB114Q30KQ6 69 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 SPATA45Q537H7 98 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 NRACQ8N912 160 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 OR2K2Q8NGT1 345 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 LINC01546A6NGU7 62 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 KNCNA6PVL3 124 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 FXYD7P58549 80 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 MAJINQ3KP22 176 aa14.53□□□□□ -0.08
HDAC1-201ENST00000373548 CCL24O00175 119 aa14.52□□□□□ -0.09
HDAC1-201ENST00000373548 NXPH4O95158 308 aa14.52□□□□□ -0.09
HDAC1-201ENST00000373548 CD7P09564 240 aa14.52□□□□□ -0.09
HDAC1-201ENST00000373548 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
HDAC1-201ENST00000373548 NXT2Q9NPJ8 142 aaKnown RBP14.51□□□□□ -0.09
HDAC1-201ENST00000373548 HBDP02042 147 aa14.51□□□□□ -0.09
HDAC1-201ENST00000373548 C14orf178Q8N769 122 aaPredicted RBP14.51□□□□□ -0.09
HDAC1-201ENST00000373548 MRAP2Q96G30 205 aa14.51□□□□□ -0.09
HDAC1-201ENST00000373548 DPH3P1Q9H4G8 78 aa14.51□□□□□ -0.09
HDAC1-201ENST00000373548 LY6G6DO95868 133 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 CD300EQ496F6 205 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-201ENST00000373548 MIEN1Q9BRT3 115 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 TSSC4Q9Y5U2 329 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-201ENST00000373548 HIVEP2P31629 2446 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 IGLV2-18A0A075B6J9 118 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 TRAV9-2A0A087WT02 112 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 C20orf202A1L168 122 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 OR4C46A6NHA9 309 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 A8MTW9 85 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 HLA-DRB4P13762 266 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 ZNF124Q15973 351 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 ZNF705AQ6ZN79 300 aaPredicted RBP14.5□□□□□ -0.09
HDAC1-201ENST00000373548 HLA-DRB4X5D2U9 266 aa14.5□□□□□ -0.09
HDAC1-201ENST00000373548 WNK1Q9H4A3 2382 aa14.49□□□□□ -0.09
HDAC1-201ENST00000373548 PRSS47A8MTI9 375 aa14.49□□□□□ -0.09
HDAC1-201ENST00000373548 DEFB125Q8N687 156 aa14.49□□□□□ -0.09
HDAC1-201ENST00000373548 AP1S3Q96PC3 154 aa14.49□□□□□ -0.09
HDAC1-201ENST00000373548 MCRIP2Q9BUT9 160 aaKnown RBP14.49□□□□□ -0.09
HDAC1-201ENST00000373548 IGHV3-16A0A0C4DH30 117 aa14.48□□□□□ -0.09
HDAC1-201ENST00000373548 H0Y8G0 127 aa14.48□□□□□ -0.09
HDAC1-201ENST00000373548 H3BMM0 161 aa14.48□□□□□ -0.09
HDAC1-201ENST00000373548 Q8N8P6 123 aa14.48□□□□□ -0.09
HDAC1-201ENST00000373548 MAP6D1Q9H9H5 199 aa14.48□□□□□ -0.09
HDAC1-201ENST00000373548 IGHV1OR15-1A0A075B7D0 117 aa14.48□□□□□ -0.09
HDAC1-201ENST00000373548 RBMY1BA6NDE4 496 aaKnown RBP14.47□□□□□ -0.09
HDAC1-201ENST00000373548 RBMY1EA6NEQ0 496 aaKnown RBP14.47□□□□□ -0.09
HDAC1-201ENST00000373548 RBMY1DP0C7P1 496 aaKnown RBP14.47□□□□□ -0.09
HDAC1-201ENST00000373548 LINC01545Q5VT33 79 aa14.47□□□□□ -0.09
HDAC1-201ENST00000373548 Q8N1Y9 231 aa14.47□□□□□ -0.09
HDAC1-201ENST00000373548 C9orf85Q96MD7 179 aa14.47□□□□□ -0.09
HDAC1-201ENST00000373548 SPAG8Q99932 426 aaPredicted RBP14.47□□□□□ -0.09
HDAC1-201ENST00000373548 MDFICQ9P1T7 246 aa14.47□□□□□ -0.09
HDAC1-201ENST00000373548 ZNF256Q9Y2P7 627 aaPredicted RBP14.47□□□□□ -0.09
HDAC1-201ENST00000373548 SETD2Q9BYW2 2564 aaPredicted RBP14.47□□□□□ -0.09
HDAC1-201ENST00000373548 NDUFA7O95182 113 aa14.46□□□□□ -0.09
HDAC1-201ENST00000373548 MGPP08493 103 aa14.46□□□□□ -0.09
HDAC1-201ENST00000373548 KIF25-AS1Q9Y6Z4 181 aa14.46□□□□□ -0.09
HDAC1-201ENST00000373548 RBMY1A1P0DJD3 496 aaKnown RBP14.45□□□□□ -0.1
HDAC1-201ENST00000373548 RBMY1CP0DJD4 496 aa14.45□□□□□ -0.1
HDAC1-201ENST00000373548 IGLC3P0DOY3 106 aa14.45□□□□□ -0.1
HDAC1-201ENST00000373548 IGLL1P15814 213 aa14.45□□□□□ -0.1
HDAC1-201ENST00000373548 RBMY1FQ15415 496 aaKnown RBP14.45□□□□□ -0.1
HDAC1-201ENST00000373548 RASL10AQ92737 203 aa14.45□□□□□ -0.1
HDAC1-201ENST00000373548 FCER1GP30273 86 aa14.45□□□□□ -0.1
HDAC1-201ENST00000373548 JPT2Q9H910 190 aa14.45□□□□□ -0.1
HDAC1-201ENST00000373548 OTOGQ6ZRI0 2925 aa14.44□□□□□ -0.1
HDAC1-201ENST00000373548 TRAV25A0A0B4J276 109 aa14.44□□□□□ -0.1
HDAC1-201ENST00000373548 LINC00315P59091 139 aa14.44□□□□□ -0.1
HDAC1-201ENST00000373548 POM121L12Q8N7R1 296 aa14.44□□□□□ -0.1
HDAC1-201ENST00000373548 PMCHL2Q9BQD1 86 aa14.44□□□□□ -0.1
HDAC1-201ENST00000373548 PROK1P58294 105 aa14.43□□□□□ -0.1
HDAC1-201ENST00000373548 RPL39LQ96EH5 51 aaKnown RBP14.43□□□□□ -0.1
HDAC1-201ENST00000373548 JMJD8Q96S16 334 aa14.43□□□□□ -0.1
HDAC1-201ENST00000373548 TMEM158Q8WZ71 300 aa14.42□□□□□ -0.1
HDAC1-201ENST00000373548 IFI27L1Q96BM0 104 aa14.42□□□□□ -0.1
HDAC1-201ENST00000373548 SMIM2Q9BVW6 85 aa14.42□□□□□ -0.1
HDAC1-201ENST00000373548 UQCR10Q9UDW1 63 aa14.42□□□□□ -0.1
HDAC1-201ENST00000373548 hDV102S1A0JD36 115 aa14.42□□□□□ -0.1
HDAC1-201ENST00000373548 ADARB2-AS1A8MUL3 147 aa14.42□□□□□ -0.1
HDAC1-201ENST00000373548 EREGO14944 169 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 426.3 ms