RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PGPA6NDG6 321 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 VCYO14598 125 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 OVOL1O14753 267 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 COX7CP15954 63 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 PMVKQ15126 192 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 SRSF12Q8WXF0 261 aaKnown RBP6.82□□□□□ -1.32
ATG4A-203ENST00000372232 TMEM14BQ9NUH8 114 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 MRPL35Q9NZE8 188 aaKnown RBP6.82□□□□□ -1.32
ATG4A-203ENST00000372232 FOXA2Q9Y261 457 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-203ENST00000372232 ZZEF1O43149 2961 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 PCNX1Q96RV3 2341 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 TCRAP04437 139 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 PLNP26678 52 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 LEPP41159 167 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 TMEM190Q8WZ59 177 aa6.82□□□□□ -1.32
ATG4A-203ENST00000372232 TRBV6-1A0A0K0K1D8 114 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 TMEM178BH3BS89 294 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 VPREB1P12018 145 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 CRIP2P52943 208 aaPredicted RBP6.81□□□□□ -1.32
ATG4A-203ENST00000372232 ZNF56Q15929 161 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 ZNRD1Q9P1U0 126 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 USP24Q9UPU5 2620 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 DSCAML1Q8TD84 2053 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 EPG5Q9HCE0 2579 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 TEX49A0A1B0GTD5 131 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 TINCRA0A1B0GVN0 87 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 H3BMM0 161 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 MRPS12O15235 138 aaKnown RBP6.81□□□□□ -1.32
ATG4A-203ENST00000372232 COX7A2P2O60397 106 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 OXTP01178 125 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 IGKV1-16P04430 117 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 CNTFRP26992 372 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 HLA-DMBP28068 263 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 TMEM258P61165 79 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 C10orf113Q5VZT2 155 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 CEMP1Q6PRD7 247 aaPredicted RBP6.81□□□□□ -1.32
ATG4A-203ENST00000372232 CCL17Q92583 94 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 UBE2WQ96B02 151 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 LINC00477Q96M19 166 aa6.81□□□□□ -1.32
ATG4A-203ENST00000372232 RS1O15537 224 aa6.8□□□□□ -1.32
ATG4A-203ENST00000372232 PATE2Q6UY27 113 aa6.8□□□□□ -1.32
ATG4A-203ENST00000372232 SIGLEC15Q6ZMC9 328 aa6.8□□□□□ -1.32
ATG4A-203ENST00000372232 RNASE6Q93091 150 aaKnown RBP6.8□□□□□ -1.32
ATG4A-203ENST00000372232 RAI1Q7Z5J4 1906 aaPredicted RBP6.8□□□□□ -1.32
ATG4A-203ENST00000372232 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.79□□□□□ -1.32
ATG4A-203ENST00000372232 E7EQL1 145 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 P0DMU3 169 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 FAM231AP0DMU4 169 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 FAM231CP0DMU5 169 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 CCL3L1P16619 93 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 ZNF833PQ6ZTB9 187 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 C2orf48Q96LS8 159 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 NXT2Q9NPJ8 142 aaKnown RBP6.79□□□□□ -1.32
ATG4A-203ENST00000372232 PTPRQQ9UMZ3 2332 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 UPK2O00526 184 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 CKS2P33552 79 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 SRSF9Q13242 221 aaKnown RBP eCLIP6.79□□□□□ -1.32
ATG4A-203ENST00000372232 C2orf83Q53S99 150 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 DEFB121Q5J5C9 76 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 LYPD2Q6UXB3 125 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 JPT2Q9H910 190 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 PKD1L2Q7Z442 2459 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 PKDREJQ9NTG1 2253 aa6.79□□□□□ -1.32
ATG4A-203ENST00000372232 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 NDUFB3O43676 98 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 IGLV2-11P01706 119 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 CFC1BP0CG36 223 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 CFC1P0CG37 223 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 LINC01620Q4KN68 170 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 DYNLRB1Q9NP97 96 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 TRACP01848 142 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 PRCDQ00LT1 54 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 CFHR3Q02985 330 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 TMEM170BQ5T4T1 132 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 CTSZQ9UBR2 303 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 PRO1854Q9UHT4 67 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 LINC00527Q9UJ94 153 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 SPTA1P02549 2419 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 ITPR1Q14643 2758 aa6.78□□□□□ -1.32
ATG4A-203ENST00000372232 INS-IGF2F8WCM5 200 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 SMKR1H3BMG3 65 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 SAA1P0DJI8 122 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-203ENST00000372232 ATXN8Q156A1 80 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 Q8N8P6 123 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 KAAG1Q9UBP8 84 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 RELNP78509 3460 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 POLEQ07864 2286 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 TRAV12-1A0A0B4J245 112 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 F8VRH5 84 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 NDUFA3O95167 84 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 LOXP28300 417 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-203ENST00000372232 C8orf31Q8N9H6 132 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 SLC25A39Q9BZJ4 359 aaPredicted RBP6.77□□□□□ -1.33
ATG4A-203ENST00000372232 Q9H3A6 140 aa6.77□□□□□ -1.33
ATG4A-203ENST00000372232 COX6B1P14854 86 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 MLANAQ16655 118 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 LYZL1Q6UWQ5 148 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 PRNTQ86SH4 94 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 LINC00311Q8N616 119 aa6.76□□□□□ -1.33
ATG4A-203ENST00000372232 PLEKHB2Q96CS7 222 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms