RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 TEX48A0A1B0GUV7 120 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 A0A1B0GWB2 263 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 F8W735 103 aaPredicted RBP8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 PLNP26678 52 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 ZNF80P51504 273 aaPredicted RBP8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 KLK9Q2XQG4 91 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 CFHR4Q92496 578 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 MRPL53Q96EL3 112 aaKnown RBP8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 SLC50A1Q9BRV3 221 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 KLK9Q9UKQ9 250 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 ZFHX3Q15911 3703 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 A0A087WX48 190 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 K7EMI3 77 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 C5orf64Q2M2E5 130 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 TMEM86BQ8N661 226 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 TMEM158Q8WZ71 300 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 C18orf15Q96N68 181 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 SPANXB1Q9NS25 103 aaPredicted RBP8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 VPREB3Q9UKI3 123 aa8.76□□□□□ -1.01
TSPAN1-201ENST00000372003 NF1P21359 2839 aa8.75□□□□□ -1.01
TSPAN1-201ENST00000372003 ORM1P02763 201 aa8.75□□□□□ -1.01
TSPAN1-201ENST00000372003 FXYD7P58549 80 aa8.75□□□□□ -1.01
TSPAN1-201ENST00000372003 LAGE3Q14657 143 aa8.75□□□□□ -1.01
TSPAN1-201ENST00000372003 C12orf74Q32Q52 190 aa8.75□□□□□ -1.01
TSPAN1-201ENST00000372003 ZNF479Q96JC4 524 aa8.75□□□□□ -1.01
TSPAN1-201ENST00000372003 NHP2Q9NX24 153 aaKnown RBP8.75□□□□□ -1.01
TSPAN1-201ENST00000372003 SETD2Q9BYW2 2564 aaPredicted RBP8.75□□□□□ -1.01
TSPAN1-201ENST00000372003 PLXNB1O43157 2135 aa8.74□□□□□ -1.01
TSPAN1-201ENST00000372003 GAGE12HA6NDE8 117 aa8.74□□□□□ -1.01
TSPAN1-201ENST00000372003 A6NDX4 124 aa8.74□□□□□ -1.01
TSPAN1-201ENST00000372003 IGHG4P01861 327 aa8.74□□□□□ -1.01
TSPAN1-201ENST00000372003 RNASE1P07998 156 aaKnown RBP8.74□□□□□ -1.01
TSPAN1-201ENST00000372003 GTSCR1Q86UQ5 136 aa8.74□□□□□ -1.01
TSPAN1-201ENST00000372003 SMAD5-AS1Q9Y6J3 95 aa8.74□□□□□ -1.01
TSPAN1-201ENST00000372003 A0A1B0GV72 72 aa8.73□□□□□ -1.01
TSPAN1-201ENST00000372003 NCBP2LA6PVI3 153 aaKnown RBP8.73□□□□□ -1.01
TSPAN1-201ENST00000372003 AZU1P20160 251 aa8.73□□□□□ -1.01
TSPAN1-201ENST00000372003 MRAP2Q96G30 205 aa8.73□□□□□ -1.01
TSPAN1-201ENST00000372003 EBI3Q14213 229 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 RRN3P1Q2M238 152 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 WFDC3Q8IUB2 231 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 ATP6V0E2Q8NHE4 81 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 Q8TAT8 98 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 JMJD1CQ15652 2540 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 TRBV7-3A0A075B6L6 115 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 F8VRH5 84 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 H7C1H1 209 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 CTSGP08311 255 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 TM4SF20Q53R12 229 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 LCNL1Q6ZST4 164 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 NRACQ8N912 160 aa8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 MRPL35Q9NZE8 188 aaKnown RBP8.72□□□□□ -1.01
TSPAN1-201ENST00000372003 TCTAP57738 103 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 BLCAPP62952 87 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 KRTAP24-1Q3LI83 254 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 GAGE13Q4V321 117 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 ORMDL2Q53FV1 153 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 TCTEX1D4Q5JR98 221 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 MTURNQ8N3F0 131 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 Q8N6K4 173 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 LENEPQ9Y5L5 61 aa8.71□□□□□ -1.02
TSPAN1-201ENST00000372003 IGKV3D-20A0A0C4DH25 116 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 LINC01549A6NIU2 74 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 K7ERJ3 54 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 MAPKAPK5-AS1Q8N8E1 139 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 ATP6V0BQ99437 205 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 HIST1H4GQ99525 98 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 PRO0461Q9UI25 63 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 MOB4Q9Y3A3 225 aa8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 TSSC4Q9Y5U2 329 aaPredicted RBP8.7□□□□□ -1.02
TSPAN1-201ENST00000372003 BUB3O43684 328 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 WFDC2Q14508 124 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 SPAG8Q99932 426 aaPredicted RBP8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 C20orf78Q9BR46 151 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 VCX2Q9H322 139 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 IGHV7-4-1A0A0J9YVY3 117 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 OR11H12B2RN74 326 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 GAS8-AS1O95177 125 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 LYRM7Q5U5X0 104 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 C9orf47Q6ZRZ4 202 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 Q6ZS46 218 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 Q6ZSV7 163 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 C5orf56Q8N8D9 126 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 OR11H1Q8NG94 326 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 OR11H2Q8NH07 326 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 FAM110DQ8TAY7 271 aaPredicted RBP8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 TTTY13Q9BZ97 58 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 GTSF1LQ9H1H1 148 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 ZFAND3Q9H8U3 227 aa8.69□□□□□ -1.02
TSPAN1-201ENST00000372003 PPP1R17O96001 155 aa8.68□□□□□ -1.02
TSPAN1-201ENST00000372003 TMEM78Q5T7P6 136 aa8.68□□□□□ -1.02
TSPAN1-201ENST00000372003 Q8N9W7 124 aa8.68□□□□□ -1.02
TSPAN1-201ENST00000372003 TOMM6Q96B49 74 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms