RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 C20orf78Q9BR46 151 aa21.67■■□□□ 1.06
SSBP3-204ENST00000371320 UBR5O95071 2799 aaPredicted RBP21.67■■□□□ 1.06
SSBP3-204ENST00000371320 SNRPD3P62318 126 aaKnown RBP21.67■■□□□ 1.06
SSBP3-204ENST00000371320 TMEM97Q5BJF2 176 aa21.67■■□□□ 1.06
SSBP3-204ENST00000371320 OR9G4Q8NGQ1 327 aa21.67■■□□□ 1.06
SSBP3-204ENST00000371320 ZANQ9Y493 2812 aa21.66■■□□□ 1.06
SSBP3-204ENST00000371320 CENPEQ02224 2701 aa21.66■■□□□ 1.06
SSBP3-204ENST00000371320 RPL39LQ96EH5 51 aaKnown RBP21.66■■□□□ 1.06
SSBP3-204ENST00000371320 BEX4Q9NWD9 120 aaPredicted RBP21.66■■□□□ 1.06
SSBP3-204ENST00000371320 HHLA3Q9XRX5 114 aa21.66■■□□□ 1.06
SSBP3-204ENST00000371320 HOXA3O43365 443 aaPredicted RBP21.65■■□□□ 1.06
SSBP3-204ENST00000371320 PTTG1IPP53801 180 aa21.65■■□□□ 1.06
SSBP3-204ENST00000371320 PCP2Q8IVA1 136 aa21.65■■□□□ 1.06
SSBP3-204ENST00000371320 DPM2O94777 84 aa21.65■■□□□ 1.06
SSBP3-204ENST00000371320 NXPH4O95158 308 aa21.65■■□□□ 1.06
SSBP3-204ENST00000371320 DEFB113Q30KQ7 82 aa21.65■■□□□ 1.06
SSBP3-204ENST00000371320 IGHV4OR15-8A0A075B7B6 117 aa21.64■■□□□ 1.05
SSBP3-204ENST00000371320 A0A087WW49 117 aa21.64■■□□□ 1.05
SSBP3-204ENST00000371320 TRAV12-3A0A0B4J271 114 aa21.64■■□□□ 1.05
SSBP3-204ENST00000371320 C7orf71A4D174 169 aa21.64■■□□□ 1.05
SSBP3-204ENST00000371320 SIVA1O15304 175 aa21.64■■□□□ 1.05
SSBP3-204ENST00000371320 UBE2V1Q13404 147 aa21.64■■□□□ 1.05
SSBP3-204ENST00000371320 ORMDL2Q53FV1 153 aa21.64■■□□□ 1.05
SSBP3-204ENST00000371320 Q5PR19 223 aa21.64■■□□□ 1.05
SSBP3-204ENST00000371320 K7EQG2 157 aa21.63■■□□□ 1.05
SSBP3-204ENST00000371320 LGALS9O00182 355 aa21.63■■□□□ 1.05
SSBP3-204ENST00000371320 CCL25O15444 150 aa21.63■■□□□ 1.05
SSBP3-204ENST00000371320 UBE2E2Q96LR5 201 aa21.63■■□□□ 1.05
SSBP3-204ENST00000371320 A0A0J9YX75 114 aa21.62■■□□□ 1.05
SSBP3-204ENST00000371320 ODF3Q96PU9 254 aa21.62■■□□□ 1.05
SSBP3-204ENST00000371320 CD7P09564 240 aa21.61■■□□□ 1.05
SSBP3-204ENST00000371320 HOXD3P31249 432 aaPredicted RBP21.61■■□□□ 1.05
SSBP3-204ENST00000371320 DUX5Q96PT3 197 aa21.61■■□□□ 1.05
SSBP3-204ENST00000371320 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP21.6■■□□□ 1.05
SSBP3-204ENST00000371320 PPP1R17O96001 155 aa21.6■■□□□ 1.05
SSBP3-204ENST00000371320 SEC11AP67812 179 aa21.6■■□□□ 1.05
SSBP3-204ENST00000371320 IGKV3-20P01619 116 aa21.6■■□□□ 1.05
SSBP3-204ENST00000371320 VAMP3Q15836 100 aa21.6■■□□□ 1.05
SSBP3-204ENST00000371320 TMEM160Q9NX00 188 aa21.6■■□□□ 1.05
SSBP3-204ENST00000371320 MRPL35Q9NZE8 188 aaKnown RBP21.6■■□□□ 1.05
SSBP3-204ENST00000371320 PTPN13Q12923 2485 aa21.6■■□□□ 1.05
SSBP3-204ENST00000371320 CBY3A6NI87 242 aa21.59■■□□□ 1.05
SSBP3-204ENST00000371320 K7EMI3 77 aa21.59■■□□□ 1.05
SSBP3-204ENST00000371320 POM121L12Q8N7R1 296 aa21.59■■□□□ 1.05
SSBP3-204ENST00000371320 A0A087WX48 190 aa21.59■■□□□ 1.05
SSBP3-204ENST00000371320 ERASQ7Z444 233 aa21.59■■□□□ 1.05
SSBP3-204ENST00000371320 LRRC75A-AS1Q8N1F1 130 aa21.59■■□□□ 1.05
SSBP3-204ENST00000371320 KIF25-AS1Q9Y6Z4 181 aa21.59■■□□□ 1.05
SSBP3-204ENST00000371320 IGKV2D-26A0A0A0MRZ7 120 aa21.58■■□□□ 1.05
SSBP3-204ENST00000371320 RNF152Q8N8N0 203 aa21.58■■□□□ 1.05
SSBP3-204ENST00000371320 HSD52Q0P140 79 aa21.57■■□□□ 1.04
SSBP3-204ENST00000371320 ZC2HC1BQ5TFG8 222 aa21.57■■□□□ 1.04
SSBP3-204ENST00000371320 GTSCR1Q86UQ5 136 aa21.57■■□□□ 1.04
SSBP3-204ENST00000371320 TOMM6Q96B49 74 aa21.57■■□□□ 1.04
SSBP3-204ENST00000371320 CR1P17927 2039 aa21.57■■□□□ 1.04
SSBP3-204ENST00000371320 ADAMTSL5Q6ZMM2 481 aa21.57■■□□□ 1.04
SSBP3-204ENST00000371320 DOPEY2Q9Y3R5 2298 aa21.56■■□□□ 1.04
SSBP3-204ENST00000371320 LINC00315P59091 139 aa21.56■■□□□ 1.04
SSBP3-204ENST00000371320 SCGB3A1Q96QR1 104 aa21.56■■□□□ 1.04
SSBP3-204ENST00000371320 NAV2Q8IVL1 2488 aa21.56■■□□□ 1.04
SSBP3-204ENST00000371320 TRAV12-2A0A075B6T6 113 aa21.56■■□□□ 1.04
SSBP3-204ENST00000371320 Q96MF0 132 aa21.56■■□□□ 1.04
SSBP3-204ENST00000371320 MUC4Q99102 2169 aa21.55■■□□□ 1.04
SSBP3-204ENST00000371320 CSTL1Q9H114 145 aa21.54■■□□□ 1.04
SSBP3-204ENST00000371320 JPT2Q9H910 190 aa21.54■■□□□ 1.04
SSBP3-204ENST00000371320 CDKN1BP46527 198 aa21.53■■□□□ 1.04
SSBP3-204ENST00000371320 MXRA5Q9NR99 2828 aa21.53■■□□□ 1.04
SSBP3-204ENST00000371320 TRAV12-1A0A0B4J245 112 aa21.52■■□□□ 1.04
SSBP3-204ENST00000371320 DUSP14O95147 198 aaKnown RBP21.52■■□□□ 1.04
SSBP3-204ENST00000371320 PLNP26678 52 aa21.52■■□□□ 1.04
SSBP3-204ENST00000371320 IGHV3-16A0A0C4DH30 117 aa21.52■■□□□ 1.04
SSBP3-204ENST00000371320 A6NDN8 102 aa21.52■■□□□ 1.04
SSBP3-204ENST00000371320 ABCA12Q86UK0 2595 aa21.52■■□□□ 1.03
SSBP3-204ENST00000371320 H7C1H1 209 aa21.51■■□□□ 1.03
SSBP3-204ENST00000371320 SPINK13Q1W4C9 94 aa21.51■■□□□ 1.03
SSBP3-204ENST00000371320 TCTEX1D4Q5JR98 221 aa21.51■■□□□ 1.03
SSBP3-204ENST00000371320 C2orf66Q6UXQ4 117 aa21.51■■□□□ 1.03
SSBP3-204ENST00000371320 TTTY13Q9BZ97 58 aa21.51■■□□□ 1.03
SSBP3-204ENST00000371320 A0A087WWL8 130 aa21.51■■□□□ 1.03
SSBP3-204ENST00000371320 C9orf85Q96MD7 179 aa21.5■■□□□ 1.03
SSBP3-204ENST00000371320 SUMO4Q6EEV6 95 aa21.49■■□□□ 1.03
SSBP3-204ENST00000371320 FOXI2Q6ZQN5 318 aa21.49■■□□□ 1.03
SSBP3-204ENST00000371320 Q8N2B8 174 aa21.49■■□□□ 1.03
SSBP3-204ENST00000371320 MDFICQ9P1T7 246 aa21.49■■□□□ 1.03
SSBP3-204ENST00000371320 PRRC2AP48634 2157 aaKnown RBP21.49■■□□□ 1.03
SSBP3-204ENST00000371320 F5H697 171 aa21.49■■□□□ 1.03
SSBP3-204ENST00000371320 F8VRH5 84 aa21.49■■□□□ 1.03
SSBP3-204ENST00000371320 DEFB136Q30KP8 78 aa21.49■■□□□ 1.03
SSBP3-204ENST00000371320 C18orf65Q6ZTR6 163 aa21.49■■□□□ 1.03
SSBP3-204ENST00000371320 IGHV1OR15-1A0A075B7D0 117 aa21.48■■□□□ 1.03
SSBP3-204ENST00000371320 SLURP1P55000 103 aa21.48■■□□□ 1.03
SSBP3-204ENST00000371320 Q8N1Y9 231 aa21.48■■□□□ 1.03
SSBP3-204ENST00000371320 OR4C5Q8NGB2 326 aa21.48■■□□□ 1.03
SSBP3-204ENST00000371320 HIGD1BQ9P298 99 aa21.48■■□□□ 1.03
SSBP3-204ENST00000371320 CREBBPQ92793 2442 aa21.48■■□□□ 1.03
SSBP3-204ENST00000371320 RPL32P62910 135 aaKnown RBP21.48■■□□□ 1.03
SSBP3-204ENST00000371320 NEGR1Q7Z3B1 354 aa21.48■■□□□ 1.03
SSBP3-204ENST00000371320 HLA-DRB4P13762 266 aa21.47■■□□□ 1.03
SSBP3-204ENST00000371320 AMMECR1LQ6DCA0 310 aa21.47■■□□□ 1.03
SSBP3-204ENST00000371320 SYT8Q8NBV8 401 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms