RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TRAV25A0A0B4J276 109 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 C20orf202A1L168 122 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 ZNF727A8MUV8 499 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 F6UB75 175 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 CDK2AP2O75956 126 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 ZNF705DP0CH99 300 aaPredicted RBP2.61□□□□□ -1.99
MCF2-202ENST00000370573 ZNF705BP0CI00 300 aaPredicted RBP2.61□□□□□ -1.99
MCF2-202ENST00000370573 COA6Q5JTJ3 125 aaKnown RBP2.61□□□□□ -1.99
MCF2-202ENST00000370573 HIST3H2BBQ8N257 126 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 CMTM2Q8TAZ6 248 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 TVP23CQ96ET8 276 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 IGF2BP2-AS1Q96M15 143 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 SMIM7Q9BQ49 75 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 AGPAT4-IT1Q9H0P7 198 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 GEMIN7Q9H840 131 aaKnown RBP2.61□□□□□ -1.99
MCF2-202ENST00000370573 SDF2L1Q9HCN8 221 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 ZNF256Q9Y2P7 627 aaPredicted RBP2.61□□□□□ -1.99
MCF2-202ENST00000370573 AGRNO00468 2067 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 TRAV2A0A0B4J234 112 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 B4DEV8 164 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 ZNF688P0C7X2 276 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 IGLL1P15814 213 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 ID1P41134 155 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 AKR1C3P42330 323 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 CSN1S1P47710 185 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 RPL23P62829 140 aaKnown RBP2.61□□□□□ -1.99
MCF2-202ENST00000370573 SRSF9Q13242 221 aaKnown RBP eCLIP2.61□□□□□ -1.99
MCF2-202ENST00000370573 TMEM183BQ1AE95 376 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 GDF5OSQ5U4N7 250 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 LINC01561Q8N1V8 128 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 ZNF738Q8NE65 137 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 OR10D4PQ8NGN7 298 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 OVOL2Q9BRP0 275 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 SNHG12Q9BXW3 62 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 PSG8Q9UQ74 426 aa2.61□□□□□ -1.99
MCF2-202ENST00000370573 KIR2DL5BA0A0G2JN68 375 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 KIR2DL5BA0A0G2JPC4 375 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 TRBV6-1A0A0K0K1D8 114 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 KNCNA6PVL3 124 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 C9JCJ5 164 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 K7EN84 100 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 TSHBP01222 138 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 LTAP01374 205 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 CT45A10P0DMU9 189 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 DEFB131AP59861 70 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 PAFAH1B2P68402 229 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 CENPWQ5EE01 88 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 PSMG4Q5JS54 123 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 LCE1AQ5T7P2 110 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 Q6ZVQ6 151 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 PRNTQ86SH4 94 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 Q86TA4 180 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 LINC01551Q86U37 167 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 BAGE2Q86Y30 109 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 KIR2DL5AQ8N109 375 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 TMEM75Q8N9X5 138 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 OR8A1Q8NGG7 326 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 Q8TAT8 98 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 FMC1Q96HJ9 113 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 C2orf48Q96LS8 159 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 PACRGQ96M98 296 aaPredicted RBP2.6□□□□□ -1.99
MCF2-202ENST00000370573 YPEL4Q96NS1 127 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 TMEM242Q9NWH2 141 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 CLEC5AQ9NY25 188 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 NAT8Q9UHE5 227 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 IGLV5-45A0A087WSX0 123 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 A0A0J9YX75 114 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 A0A1B0GV72 72 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 C7orf77A4D0Y5 90 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 RBAKDNA6NC62 111 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 FBLL1A6NHQ2 334 aaKnown RBP2.6□□□□□ -1.99
MCF2-202ENST00000370573 K7ERU9 68 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 CA1P00915 261 aaPredicted RBP2.6□□□□□ -1.99
MCF2-202ENST00000370573 CD7P09564 240 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 GNG4P50150 75 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 CRIP1P50238 77 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 RPL19P84098 196 aaKnown RBP2.6□□□□□ -1.99
MCF2-202ENST00000370573 OR5I1Q13606 314 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 SAMD13Q5VXD3 122 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 RNASEKQ6P5S7 137 aaKnown RBP2.6□□□□□ -1.99
MCF2-202ENST00000370573 LINC00322Q6ZN03 302 aaPredicted RBP2.6□□□□□ -1.99
MCF2-202ENST00000370573 C9orf47Q6ZRZ4 202 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 APRG1Q8IVJ8 170 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 TMEM183AQ8IXX5 376 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 OR2K2Q8NGT1 345 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 BTF3L4Q96K17 158 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 C20orf144Q9BQM9 153 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 NIPSNAP3BQ9BS92 247 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 RPS10P5Q9NQ39 176 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 DNAH3Q8TD57 4116 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 NBEAL1Q6ZS30 2694 aa2.6□□□□□ -1.99
MCF2-202ENST00000370573 RBMY1BA6NDE4 496 aaKnown RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 RBMY1EA6NEQ0 496 aaKnown RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 OR4C46A6NHA9 309 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 IFITM10A6NMD0 228 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 PHOX2AO14813 284 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 RBMY1DP0C7P1 496 aaKnown RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 INSL3P51460 131 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 ZNF80P51504 273 aaPredicted RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 ZNF138P52744 262 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms