RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 H2AFB1P0C5Y9 115 aa12.97□□□□□ -0.33
CKS1B-203ENST00000368439 TTC32Q5I0X7 151 aa12.97□□□□□ -0.33
CKS1B-203ENST00000368439 ZNF506Q5JVG8 444 aa12.97□□□□□ -0.33
CKS1B-203ENST00000368439 LOC100131303A0A0U1RQF7 123 aa12.96□□□□□ -0.33
CKS1B-203ENST00000368439 NXPH4O95158 308 aa12.96□□□□□ -0.33
CKS1B-203ENST00000368439 UBE2G1P62253 170 aa12.96□□□□□ -0.33
CKS1B-203ENST00000368439 DNLZQ5SXM8 178 aa12.96□□□□□ -0.33
CKS1B-203ENST00000368439 KRBOX1C9JBD0 128 aa12.95□□□□□ -0.34
CKS1B-203ENST00000368439 SIVA1O15304 175 aa12.95□□□□□ -0.34
CKS1B-203ENST00000368439 SH2D1AO60880 128 aa12.95□□□□□ -0.34
CKS1B-203ENST00000368439 SRIP30626 198 aa12.95□□□□□ -0.34
CKS1B-203ENST00000368439 AKR1C3P42330 323 aa12.95□□□□□ -0.34
CKS1B-203ENST00000368439 ZNF674Q2M3X9 581 aa12.95□□□□□ -0.34
CKS1B-203ENST00000368439 DNAH5Q8TE73 4624 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 B4DEV8 164 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 CIDEAO60543 219 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 C1QBP02746 253 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 CCL20P78556 96 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 SLC25A29Q8N8R3 303 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 PCNPQ8WW12 178 aaKnown RBP12.94□□□□□ -0.34
CKS1B-203ENST00000368439 IL36BQ9NZH7 164 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 LRP1BQ9NZR2 4599 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 RYR1P21817 5038 aa12.94□□□□□ -0.34
CKS1B-203ENST00000368439 TRAV1-1A0A0B4J248 108 aa12.93□□□□□ -0.34
CKS1B-203ENST00000368439 SCO2A0A1W2PP80 73 aa12.93□□□□□ -0.34
CKS1B-203ENST00000368439 ASIPP42127 132 aa12.93□□□□□ -0.34
CKS1B-203ENST00000368439 PIK3CD-AS1Q5SR53 167 aa12.93□□□□□ -0.34
CKS1B-203ENST00000368439 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
CKS1B-203ENST00000368439 IGHV3-73A0A0B4J1V6 119 aa12.92□□□□□ -0.34
CKS1B-203ENST00000368439 TRBV6-4A0A1B0GX49 114 aa12.92□□□□□ -0.34
CKS1B-203ENST00000368439 M0R036 132 aa12.92□□□□□ -0.34
CKS1B-203ENST00000368439 BTF3P20290 206 aaKnown RBP12.92□□□□□ -0.34
CKS1B-203ENST00000368439 S100A4P26447 101 aaKnown RBP12.92□□□□□ -0.34
CKS1B-203ENST00000368439 LINC01559Q495D7 138 aa12.92□□□□□ -0.34
CKS1B-203ENST00000368439 TXNDC17Q9BRA2 123 aa12.92□□□□□ -0.34
CKS1B-203ENST00000368439 MLST8Q9BVC4 326 aa12.92□□□□□ -0.34
CKS1B-203ENST00000368439 H3BVH4 76 aa12.91□□□□□ -0.34
CKS1B-203ENST00000368439 S100A9P06702 114 aaKnown RBP12.91□□□□□ -0.34
CKS1B-203ENST00000368439 SULT1A2P50226 295 aa12.91□□□□□ -0.34
CKS1B-203ENST00000368439 RAB5CP51148 216 aa12.91□□□□□ -0.34
CKS1B-203ENST00000368439 UFSP1Q6NVU6 142 aa12.91□□□□□ -0.34
CKS1B-203ENST00000368439 NHLRC2Q8NBF2 726 aa12.91□□□□□ -0.34
CKS1B-203ENST00000368439 PARLQ9H300 379 aa12.91□□□□□ -0.34
CKS1B-203ENST00000368439 SCRT2Q9NQ03 307 aa12.91□□□□□ -0.34
CKS1B-203ENST00000368439 GRIFINA4D1Z8 144 aa12.9□□□□□ -0.34
CKS1B-203ENST00000368439 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
CKS1B-203ENST00000368439 LINC00315P59091 139 aa12.9□□□□□ -0.34
CKS1B-203ENST00000368439 Q6ZRN7 208 aaPredicted RBP12.9□□□□□ -0.34
CKS1B-203ENST00000368439 Q6ZSN1 163 aa12.9□□□□□ -0.34
CKS1B-203ENST00000368439 WFDC10BQ8IUB3 73 aa12.9□□□□□ -0.34
CKS1B-203ENST00000368439 JPT2Q9H910 190 aa12.9□□□□□ -0.34
CKS1B-203ENST00000368439 TIRAPP58753 221 aa12.89□□□□□ -0.35
CKS1B-203ENST00000368439 RHOHQ15669 191 aa12.89□□□□□ -0.35
CKS1B-203ENST00000368439 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
CKS1B-203ENST00000368439 EIF5AL1Q6IS14 154 aaKnown RBP12.89□□□□□ -0.35
CKS1B-203ENST00000368439 ZFP2Q6ZN57 461 aa12.89□□□□□ -0.35
CKS1B-203ENST00000368439 SH2D6Q7Z4S9 175 aa12.89□□□□□ -0.35
CKS1B-203ENST00000368439 SLC51BQ86UW2 128 aa12.89□□□□□ -0.35
CKS1B-203ENST00000368439 A8MWV9 139 aa12.88□□□□□ -0.35
CKS1B-203ENST00000368439 MGST1P10620 155 aaKnown RBP12.88□□□□□ -0.35
CKS1B-203ENST00000368439 C11orf52Q96A22 123 aa12.88□□□□□ -0.35
CKS1B-203ENST00000368439 PRADC1Q9BSG0 188 aa12.88□□□□□ -0.35
CKS1B-203ENST00000368439 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
CKS1B-203ENST00000368439 MANBALQ9NQG1 85 aa12.88□□□□□ -0.35
CKS1B-203ENST00000368439 GNG13Q9P2W3 67 aa12.88□□□□□ -0.35
CKS1B-203ENST00000368439 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
CKS1B-203ENST00000368439 AKAP14Q86UN6 197 aa12.87□□□□□ -0.35
CKS1B-203ENST00000368439 BAGE2Q86Y30 109 aa12.87□□□□□ -0.35
CKS1B-203ENST00000368439 C9orf62Q8N4C0 152 aa12.87□□□□□ -0.35
CKS1B-203ENST00000368439 hCG_2014768A0A024R1R8 64 aa12.86□□□□□ -0.35
CKS1B-203ENST00000368439 DNAH10OSP0CZ25 163 aa12.86□□□□□ -0.35
CKS1B-203ENST00000368439 DERL1Q9BUN8 251 aa12.86□□□□□ -0.35
CKS1B-203ENST00000368439 TNFRSF18Q9Y5U5 241 aa12.86□□□□□ -0.35
CKS1B-203ENST00000368439 LY96Q9Y6Y9 160 aa12.86□□□□□ -0.35
CKS1B-203ENST00000368439 LINC00694P0DN24 101 aa12.85□□□□□ -0.35
CKS1B-203ENST00000368439 RPL35P42766 123 aaKnown RBP12.85□□□□□ -0.35
CKS1B-203ENST00000368439 Q9UF83 564 aa12.85□□□□□ -0.35
CKS1B-203ENST00000368439 APOBP04114 4563 aaKnown RBP12.84□□□□□ -0.35
CKS1B-203ENST00000368439 MED14OSP0DP75 135 aa12.84□□□□□ -0.35
CKS1B-203ENST00000368439 RPL19P84098 196 aaKnown RBP12.84□□□□□ -0.35
CKS1B-203ENST00000368439 SYT8Q8NBV8 401 aa12.84□□□□□ -0.35
CKS1B-203ENST00000368439 SFRP2Q96HF1 295 aa12.84□□□□□ -0.35
CKS1B-203ENST00000368439 CRYGDP07320 174 aa12.83□□□□□ -0.36
CKS1B-203ENST00000368439 CXCL1P09341 107 aa12.83□□□□□ -0.36
CKS1B-203ENST00000368439 PHLDA3Q9Y5J5 127 aa12.83□□□□□ -0.36
CKS1B-203ENST00000368439 HSPG2P98160 4391 aa12.83□□□□□ -0.36
CKS1B-203ENST00000368439 TEX46H3BTG2 121 aa12.82□□□□□ -0.36
CKS1B-203ENST00000368439 K7EP13 123 aa12.82□□□□□ -0.36
CKS1B-203ENST00000368439 IGLV2-8P01709 118 aa12.82□□□□□ -0.36
CKS1B-203ENST00000368439 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
CKS1B-203ENST00000368439 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
CKS1B-203ENST00000368439 M0R381 172 aa12.81□□□□□ -0.36
CKS1B-203ENST00000368439 RHODO00212 210 aa12.81□□□□□ -0.36
CKS1B-203ENST00000368439 MEF2BQ02080 365 aaPredicted RBP12.81□□□□□ -0.36
CKS1B-203ENST00000368439 ZFP82Q8N141 532 aa12.81□□□□□ -0.36
CKS1B-203ENST00000368439 ATP6V0E2Q8NHE4 81 aa12.81□□□□□ -0.36
CKS1B-203ENST00000368439 SSBP4Q9BWG4 385 aaPredicted RBP12.81□□□□□ -0.36
CKS1B-203ENST00000368439 GTSF1LQ9H1H1 148 aa12.81□□□□□ -0.36
CKS1B-203ENST00000368439 A0A087WWL8 130 aa12.8□□□□□ -0.36
CKS1B-203ENST00000368439 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms