RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 GAGE5Q13069 117 aa13.89□□□□□ -0.19
CD47-202ENST00000361309 GAGE13Q4V321 117 aa13.89□□□□□ -0.19
CD47-202ENST00000361309 WFDC1Q9HC57 220 aa13.89□□□□□ -0.19
CD47-202ENST00000361309 FAT3Q8TDW7 4589 aa13.88□□□□□ -0.19
CD47-202ENST00000361309 SERTM2A0A1B0GWG4 89 aa13.88□□□□□ -0.19
CD47-202ENST00000361309 LINC00694P0DN24 101 aa13.88□□□□□ -0.19
CD47-202ENST00000361309 TOR2AQ5JU69 321 aa13.88□□□□□ -0.19
CD47-202ENST00000361309 SERTAD4-AS1Q5TG53 156 aa13.88□□□□□ -0.19
CD47-202ENST00000361309 SH3BGRL3Q9H299 93 aa13.88□□□□□ -0.19
CD47-202ENST00000361309 PARLQ9H300 379 aa13.88□□□□□ -0.19
CD47-202ENST00000361309 PSG8Q9UQ74 426 aa13.88□□□□□ -0.19
CD47-202ENST00000361309 GGTLC3B5MD39 225 aa13.87□□□□□ -0.19
CD47-202ENST00000361309 TCRAP04437 139 aa13.87□□□□□ -0.19
CD47-202ENST00000361309 PET100P0DJ07 73 aa13.87□□□□□ -0.19
CD47-202ENST00000361309 ARL14EPLP0DKL9 152 aa13.87□□□□□ -0.19
CD47-202ENST00000361309 OR10G9Q8NGN4 311 aa13.87□□□□□ -0.19
CD47-202ENST00000361309 OR10G7Q8NGN6 311 aa13.87□□□□□ -0.19
CD47-202ENST00000361309 Q9UF83 564 aa13.87□□□□□ -0.19
CD47-202ENST00000361309 HMCN2Q8NDA2 5059 aa13.87□□□□□ -0.19
CD47-202ENST00000361309 RBFOX3A6NFN3 312 aa13.86□□□□□ -0.19
CD47-202ENST00000361309 SMUG1Q53HV7 270 aa13.86□□□□□ -0.19
CD47-202ENST00000361309 C5orf17Q8NAS9 161 aa13.86□□□□□ -0.19
CD47-202ENST00000361309 COX11Q9Y6N1 276 aa13.86□□□□□ -0.19
CD47-202ENST00000361309 INMT-MINDY4F8WBC2 141 aa13.85□□□□□ -0.19
CD47-202ENST00000361309 K7EQM0 130 aa13.85□□□□□ -0.19
CD47-202ENST00000361309 IGLV2-11P01706 119 aa13.85□□□□□ -0.19
CD47-202ENST00000361309 KRTAP10-4P60372 401 aaPredicted RBP13.85□□□□□ -0.19
CD47-202ENST00000361309 ZFP69Q49AA0 526 aa13.85□□□□□ -0.19
CD47-202ENST00000361309 ZFP2Q6ZN57 461 aa13.85□□□□□ -0.19
CD47-202ENST00000361309 SYT8Q8NBV8 401 aa13.85□□□□□ -0.19
CD47-202ENST00000361309 OR2T35Q8NGX2 323 aa13.85□□□□□ -0.19
CD47-202ENST00000361309 NDUFA13Q9P0J0 144 aa13.85□□□□□ -0.19
CD47-202ENST00000361309 A8MWV9 139 aa13.84□□□□□ -0.19
CD47-202ENST00000361309 LGALSLQ3ZCW2 172 aaPredicted RBP13.84□□□□□ -0.19
CD47-202ENST00000361309 PRNTQ86SH4 94 aa13.84□□□□□ -0.19
CD47-202ENST00000361309 CYB561D1Q8N8Q1 229 aa13.84□□□□□ -0.19
CD47-202ENST00000361309 CHAC1Q9BUX1 264 aa13.84□□□□□ -0.19
CD47-202ENST00000361309 SAMD10Q9BYL1 202 aa13.84□□□□□ -0.19
CD47-202ENST00000361309 UBR4Q5T4S7 5183 aa13.83□□□□□ -0.19
CD47-202ENST00000361309 A0A087WWC5 75 aa13.83□□□□□ -0.2
CD47-202ENST00000361309 CDC34P49427 236 aaPredicted RBP13.83□□□□□ -0.2
CD47-202ENST00000361309 FLI1Q01543 452 aaPredicted RBP13.83□□□□□ -0.2
CD47-202ENST00000361309 C14orf178Q8N769 122 aaPredicted RBP13.83□□□□□ -0.2
CD47-202ENST00000361309 Q8N976 141 aa13.83□□□□□ -0.2
CD47-202ENST00000361309 RMI2Q96E14 147 aa13.83□□□□□ -0.2
CD47-202ENST00000361309 DNAJC30Q96LL9 226 aa13.83□□□□□ -0.2
CD47-202ENST00000361309 RNF222A6NCQ9 220 aa13.82□□□□□ -0.2
CD47-202ENST00000361309 STAG3L2P0CL84 134 aa13.82□□□□□ -0.2
CD47-202ENST00000361309 STAG3L3P0CL85 134 aa13.82□□□□□ -0.2
CD47-202ENST00000361309 S100A4P26447 101 aaKnown RBP13.82□□□□□ -0.2
CD47-202ENST00000361309 LINC00479Q96M42 142 aa13.82□□□□□ -0.2
CD47-202ENST00000361309 JPT2Q9H910 190 aa13.82□□□□□ -0.2
CD47-202ENST00000361309 IGKV2D-24A0A075B6R9 120 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 IGKV3D-20A0A0C4DH25 116 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 SSNA1O43805 119 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 GCHFRP30047 84 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 FGF8P55075 233 aaPredicted RBP13.81□□□□□ -0.2
CD47-202ENST00000361309 SUMO1P63165 101 aaKnown RBP13.81□□□□□ -0.2
CD47-202ENST00000361309 PIK3CD-AS1Q5SR53 167 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 CIRBP-AS1Q8TBR5 109 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 SUN5Q8TC36 379 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 S100ZQ8WXG8 99 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 EPDR1Q9UM22 224 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 URGCP-MRPS24S4R325 110 aa13.81□□□□□ -0.2
CD47-202ENST00000361309 UPK1BO75841 260 aa13.8□□□□□ -0.2
CD47-202ENST00000361309 OXTP01178 125 aa13.8□□□□□ -0.2
CD47-202ENST00000361309 UFSP1Q6NVU6 142 aa13.8□□□□□ -0.2
CD47-202ENST00000361309 LINC00299Q6ZSB3 139 aa13.8□□□□□ -0.2
CD47-202ENST00000361309 NIT1Q86X76 327 aa13.8□□□□□ -0.2
CD47-202ENST00000361309 KLK12Q9UKR0 248 aa13.8□□□□□ -0.2
CD47-202ENST00000361309 SAPCD1Q5SSQ6 148 aa13.79□□□□□ -0.2
CD47-202ENST00000361309 RAB24Q969Q5 203 aa13.79□□□□□ -0.2
CD47-202ENST00000361309 PKHD1L1Q86WI1 4243 aa13.79□□□□□ -0.2
CD47-202ENST00000361309 ASIPP42127 132 aa13.78□□□□□ -0.2
CD47-202ENST00000361309 IFITM3Q01628 133 aa13.78□□□□□ -0.2
CD47-202ENST00000361309 MARVELD1Q9BSK0 173 aa13.78□□□□□ -0.2
CD47-202ENST00000361309 SEC11BP0C7V7 166 aa13.77□□□□□ -0.21
CD47-202ENST00000361309 DMRTA1Q5VZB9 504 aa13.77□□□□□ -0.21
CD47-202ENST00000361309 UBE2WQ96B02 151 aa13.77□□□□□ -0.21
CD47-202ENST00000361309 TRAV34A0A0B4J273 112 aa13.76□□□□□ -0.21
CD47-202ENST00000361309 HSD17B11Q8NBQ5 300 aa13.76□□□□□ -0.21
CD47-202ENST00000361309 OR2G3Q8NGZ4 309 aa13.76□□□□□ -0.21
CD47-202ENST00000361309 IL36BQ9NZH7 164 aa13.76□□□□□ -0.21
CD47-202ENST00000361309 FABP5P3A8MUU1 101 aa13.75□□□□□ -0.21
CD47-202ENST00000361309 H3BVH4 76 aa13.75□□□□□ -0.21
CD47-202ENST00000361309 IGLV2-8P01709 118 aa13.75□□□□□ -0.21
CD47-202ENST00000361309 TMEM167BQ9NRX6 74 aa13.75□□□□□ -0.21
CD47-202ENST00000361309 PLA2G2DQ9UNK4 145 aa13.75□□□□□ -0.21
CD47-202ENST00000361309 A0A087WX48 190 aa13.74□□□□□ -0.21
CD47-202ENST00000361309 B4DEV8 164 aa13.74□□□□□ -0.21
CD47-202ENST00000361309 RHODO00212 210 aa13.74□□□□□ -0.21
CD47-202ENST00000361309 CXorf1O96002 111 aa13.74□□□□□ -0.21
CD47-202ENST00000361309 FAM74A4Q5TZK3 123 aa13.74□□□□□ -0.21
CD47-202ENST00000361309 ARL2-SNX15V9GYD0 113 aa13.74□□□□□ -0.21
CD47-202ENST00000361309 PSMG3Q9BT73 122 aaPredicted RBP13.73□□□□□ -0.21
CD47-202ENST00000361309 ATP6V0CP27449 155 aa13.72□□□□□ -0.21
CD47-202ENST00000361309 ELOBQ15370 118 aa13.72□□□□□ -0.21
CD47-202ENST00000361309 ATRAIDQ6UW56 229 aa13.72□□□□□ -0.21
CD47-202ENST00000361309 CHCHD7Q9BUK0 85 aa13.72□□□□□ -0.21
CD47-202ENST00000361309 A0A087WWL8 130 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms