RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 K7EMT4 169 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 C18orf15Q96N68 181 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 ZNF580Q9UK33 172 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 SNAI2O43623 268 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 BLCAPP62952 87 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 SRSF1Q07955 248 aaKnown RBP eCLIP7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 LOXL1Q08397 574 aaPredicted RBP7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 LAGE3Q14657 143 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 YAE1D1Q9NRH1 226 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 TMEM89A2RUT3 159 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 M0R381 172 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 TRBV12-3P01733 135 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 MED14OSP0DP75 135 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 CITED2Q99967 270 aaPredicted RBP7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 IGHV4-4A0A075B6R2 117 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 SMIM13P0DJ93 91 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 DPH3P1Q9H4G8 78 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 TMEM160Q9NX00 188 aa7.1□□□□□ -1.27
GTF3C2-202ENST00000359541 TACC2O95359 2948 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 RNASE4P34096 147 aaKnown RBP7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 FXYD7P58549 80 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 IGLV1-40P01703 118 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 SNRPD3P62318 126 aaKnown RBP7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 HSD52Q0P140 79 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 ORMDL2Q53FV1 153 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 FAM159AQ6UWV7 190 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 DEFB104AQ8WTQ1 72 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 TMEM158Q8WZ71 300 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 KLK15Q9H2R5 256 aa7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 GEMIN7Q9H840 131 aaKnown RBP7.09□□□□□ -1.27
GTF3C2-202ENST00000359541 LINC01549A6NIU2 74 aa7.09□□□□□ -1.28
GTF3C2-202ENST00000359541 CD5LO43866 347 aa7.09□□□□□ -1.28
GTF3C2-202ENST00000359541 PSMG3-AS1Q96PY0 264 aa7.09□□□□□ -1.28
GTF3C2-202ENST00000359541 MGAM2Q2M2H8 2515 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 A0A096LNJ9 63 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 MGPP08493 103 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 BVES-AS1Q5T3Y7 98 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 SCGB1D4Q6XE38 83 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 NRGNQ92686 78 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 FOXC2Q99958 501 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 C11orf21Q9P2W6 132 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 K7EMI3 77 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 DPM2O94777 84 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 GCSHP23434 173 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 GPHB5Q86YW7 130 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 ZNF479Q96JC4 524 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 IGKCP01834 107 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 OR5A1Q8NGJ0 315 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 C20orf173Q96LM9 149 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 SPXQ9BT56 116 aa7.08□□□□□ -1.28
GTF3C2-202ENST00000359541 SIGMAR1Q99720 223 aa7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 LINC01546A6NGU7 62 aa7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 DEFB112Q30KQ8 113 aa7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 ZFAND2AQ8N6M9 145 aa7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 C20orf78Q9BR46 151 aa7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 B5MCH6 92 aa7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 SOCS3O14543 225 aa7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.282e-8■□□□□ 8.9
GTF3C2-202ENST00000359541 SMIM2Q9BVW6 85 aa7.07□□□□□ -1.28
GTF3C2-202ENST00000359541 IGHV4-59P01825 116 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 DEFB125Q8N687 156 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 C7orf71A4D174 169 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 OR11H12B2RN74 326 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 SYT8Q8NBV8 401 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 OR11H1Q8NG94 326 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 OR11H2Q8NH07 326 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 GATA1P15976 413 aaPredicted RBP7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 EMP1P54849 157 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 SUMO2P61956 95 aaKnown RBP7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 LCNL1Q6ZST4 164 aa7.06□□□□□ -1.28
GTF3C2-202ENST00000359541 ELANEP08246 267 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 FAM74A4Q5TZK3 123 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 VPREB3Q9UKI3 123 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 K7EP13 123 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 DUSP14O95147 198 aaKnown RBP7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 SCGB1C2P0DMR2 95 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 PLNP26678 52 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 PAPPA-AS1Q5QFB9 102 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 HIST1H4GQ99525 98 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 PRR9Q5T870 116 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 C14orf178Q8N769 122 aaPredicted RBP7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 C1orf43Q9BWL3 253 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 DKK2Q9UBU2 259 aa7.05□□□□□ -1.28
GTF3C2-202ENST00000359541 PSMB8P28062 276 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 CFHR3Q02985 330 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 TEX29Q8N6K0 151 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 SCGB3A1Q96QR1 104 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 F8P00451 2351 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 IGKV3OR2-268A0A0C4DH90 116 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 RNF223E7ERA6 249 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 F6UB75 175 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 C4orf48Q5BLP8 95 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 NRACQ8N912 160 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 DGAT2L7PQ6IED9 249 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 ODF3Q96PU9 254 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
GTF3C2-202ENST00000359541 AVPP01185 164 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms